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IVF0018466 (gene) of Melon (IVF77) v1 genome

Gene IDIVF0018466
OrganismCucumis melo ssp. agrestis cv. IVF77 (Melon (IVF77) v1)
DescriptionMediator of RNA polymerase II transcription subunit 12-like isoform X1
Genome locationchr11:4749293..4749583
RNA-Seq ExpressionIVF0018466
SyntenyIVF0018466
Gene Ontology termsGO:0048507 - meristem development (biological process)
GO:0046983 - protein dimerization activity (molecular function)
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0045997.1 transposase [Cucumis melo var. makuwa]6.73e-55100Show/hide
Query:  MSAFGMTYYDSRVGQSSDFGTRYYTSEAGQSPSNFGQQYYDLGSDPSSSYMYGHGRGRGEHNEYLYYEVPVAIPEQLDEQQQQENQEEIQQQRVQS
        MSAFGMTYYDSRVGQSSDFGTRYYTSEAGQSPSNFGQQYYDLGSDPSSSYMYGHGRGRGEHNEYLYYEVPVAIPEQLDEQQQQENQEEIQQQRVQS
Subjt:  MSAFGMTYYDSRVGQSSDFGTRYYTSEAGQSPSNFGQQYYDLGSDPSSSYMYGHGRGRGEHNEYLYYEVPVAIPEQLDEQQQQENQEEIQQQRVQS

KAA0062959.1 GATA zinc finger domain-containing protein 10-like isoform X2 [Cucumis melo var. makuwa]3.74e-4483.33Show/hide
Query:  MSAFGMTYYDSRVGQSSDFGTRYYTSEAGQSPSNFGQQYYDLGSDPSSSYMYGHGRGRGEHNEYLYYEVPVAIPEQLDEQQQQENQEEIQQQRVQS
        MSAFG TYYDS VGQSSDF TRYY SEAG S SNF QQYYDL SDPSSSYM+GH  GRGEH EYLYYEVP A+PEQ DEQQQQENQEEIQ+QRVQS
Subjt:  MSAFGMTYYDSRVGQSSDFGTRYYTSEAGQSPSNFGQQYYDLGSDPSSSYMYGHGRGRGEHNEYLYYEVPVAIPEQLDEQQQQENQEEIQQQRVQS

TYK02811.1 GATA zinc finger domain-containing protein 10-like isoform X2 [Cucumis melo var. makuwa]1.20e-4373.87Show/hide
Query:  MSAFGMTYYDSRVGQSSDFGTRYYTSEAGQSPSNFGQQYYDLGSDPSSSYMYGHGRGRGEHNEYLYYEVPVAIPEQL---------------DEQQQQEN
        M  FG TYYDS VGQSSDFG  YY SEAGQS ++FGQQYYDLGSDPSSSYM+GHGRGRGEHNEYLYYEVP A+PEQ                DEQQQQEN
Subjt:  MSAFGMTYYDSRVGQSSDFGTRYYTSEAGQSPSNFGQQYYDLGSDPSSSYMYGHGRGRGEHNEYLYYEVPVAIPEQL---------------DEQQQQEN

Query:  QEEIQQQRVQS
        QEEIQQQRVQS
Subjt:  QEEIQQQRVQS

TYK16383.1 GATA zinc finger domain-containing protein 10-like isoform X2 [Cucumis melo var. makuwa]2.52e-4280.21Show/hide
Query:  MSAFGMTYYDSRVGQSSDFGTRYYTSEAGQSPSNFGQQYYDLGSDPSSSYMYGHGRGRGEHNEYLYYEVPVAIPEQLDEQQQQENQEEIQQQRVQS
        MS FG TYYDS VGQSSDF TRYY SEAG S SNF QQYYDL SDPSSSY++GH  G GEH EYLYYEVP A+PEQ DEQQQQENQEEIQ+QRVQS
Subjt:  MSAFGMTYYDSRVGQSSDFGTRYYTSEAGQSPSNFGQQYYDLGSDPSSSYMYGHGRGRGEHNEYLYYEVPVAIPEQLDEQQQQENQEEIQQQRVQS

TYK18891.1 mediator of RNA polymerase II transcription subunit 12-like isoform X1 [Cucumis melo var. makuwa]2.84e-4173.87Show/hide
Query:  MSAFGMTYYDSRVGQSSDFGTRYYTSEAGQSPSNFGQQYYDLGSDPSSSYMYGHGRGRGEHNEYLYYEVPVAIPEQL---------------DEQQQQEN
        M  FG TYYDS VGQSSDFG  YY SEAGQS ++FGQQYYDLGSDPSSSYM+GHGRGRGEHNEYLYYEVP A+PEQ                DEQQQQEN
Subjt:  MSAFGMTYYDSRVGQSSDFGTRYYTSEAGQSPSNFGQQYYDLGSDPSSSYMYGHGRGRGEHNEYLYYEVPVAIPEQL---------------DEQQQQEN

Query:  QEEIQQQRVQS
        QEEIQQQRVQS
Subjt:  QEEIQQQRVQS

TrEMBL top hitse value%identityAlignment
A0A5A7SU33 Serine/threonine-protein phosphatase 7 long form-like protein7.4e-3373.87Show/hide
Query:  MSAFGMTYYDSRVGQSSDFGTRYYTSEAGQSPSNFGQQYYDLGSDPSSSYMYGHGRGRGEHNEYLYYEVPVAIPE---------------QLDEQQQQEN
        M  FG TYYDS VGQSSDFG  YY SEAGQS ++FGQQYYDLGSDPSSSYM+GHGRGRGEHNEYLYYEVP A+PE               Q DEQQQQEN
Subjt:  MSAFGMTYYDSRVGQSSDFGTRYYTSEAGQSPSNFGQQYYDLGSDPSSSYMYGHGRGRGEHNEYLYYEVPVAIPE---------------QLDEQQQQEN

Query:  QEEIQQQRVQS
        QEEIQQQRVQS
Subjt:  QEEIQQQRVQS

A0A5A7TVT0 Transposase3.2e-44100Show/hide
Query:  MSAFGMTYYDSRVGQSSDFGTRYYTSEAGQSPSNFGQQYYDLGSDPSSSYMYGHGRGRGEHNEYLYYEVPVAIPEQLDEQQQQENQEEIQQQRVQS
        MSAFGMTYYDSRVGQSSDFGTRYYTSEAGQSPSNFGQQYYDLGSDPSSSYMYGHGRGRGEHNEYLYYEVPVAIPEQLDEQQQQENQEEIQQQRVQS
Subjt:  MSAFGMTYYDSRVGQSSDFGTRYYTSEAGQSPSNFGQQYYDLGSDPSSSYMYGHGRGRGEHNEYLYYEVPVAIPEQLDEQQQQENQEEIQQQRVQS

A0A5A7VBH9 GATA zinc finger domain-containing protein 10-like isoform X24.4e-3383.33Show/hide
Query:  MSAFGMTYYDSRVGQSSDFGTRYYTSEAGQSPSNFGQQYYDLGSDPSSSYMYGHGRGRGEHNEYLYYEVPVAIPEQLDEQQQQENQEEIQQQRVQS
        MSAFG TYYDS VGQSSDF TRYY SEAG S SNF QQYYDL SDPSSSYM+GH  GRGEH EYLYYEVP A+PEQ DEQQQQENQEEIQ+QRVQS
Subjt:  MSAFGMTYYDSRVGQSSDFGTRYYTSEAGQSPSNFGQQYYDLGSDPSSSYMYGHGRGRGEHNEYLYYEVPVAIPEQLDEQQQQENQEEIQQQRVQS

A0A5A7VIP6 Mediator of RNA polymerase II transcription subunit 12-like isoform X14.4e-3373.87Show/hide
Query:  MSAFGMTYYDSRVGQSSDFGTRYYTSEAGQSPSNFGQQYYDLGSDPSSSYMYGHGRGRGEHNEYLYYEVPVAIPE---------------QLDEQQQQEN
        M  FG TYYDS VGQSSDFG  YY SEAGQS ++FGQQYYDLGSDPSSSYM+GHGRGRGEHNEYLYYEVP A+PE               Q DEQQQQEN
Subjt:  MSAFGMTYYDSRVGQSSDFGTRYYTSEAGQSPSNFGQQYYDLGSDPSSSYMYGHGRGRGEHNEYLYYEVPVAIPE---------------QLDEQQQQEN

Query:  QEEIQQQRVQS
        QEEIQQQRVQS
Subjt:  QEEIQQQRVQS

A0A5D3BSU2 GATA zinc finger domain-containing protein 10-like isoform X27.4e-3373.87Show/hide
Query:  MSAFGMTYYDSRVGQSSDFGTRYYTSEAGQSPSNFGQQYYDLGSDPSSSYMYGHGRGRGEHNEYLYYEVPVAIPE---------------QLDEQQQQEN
        M  FG TYYDS VGQSSDFG  YY SEAGQS ++FGQQYYDLGSDPSSSYM+GHGRGRGEHNEYLYYEVP A+PE               Q DEQQQQEN
Subjt:  MSAFGMTYYDSRVGQSSDFGTRYYTSEAGQSPSNFGQQYYDLGSDPSSSYMYGHGRGRGEHNEYLYYEVPVAIPE---------------QLDEQQQQEN

Query:  QEEIQQQRVQS
        QEEIQQQRVQS
Subjt:  QEEIQQQRVQS

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGTCAGCATTTGGAATGACATATTATGATTCAAGAGTCGGTCAATCGTCAGACTTTGGAACAAGATATTATACTTCAGAGGCAGGTCAATCACCATCAAACTTTGGGCA
ACAGTACTATGATTTAGGGAGCGATCCATCGTCTTCATACATGTATGGTCATGGGCGTGGTCGCGGAGAGCATAATGAATATTTGTACTATGAAGTACCTGTAGCGATAC
CCGAGCAATTAGATGAGCAACAACAACAAGAGAATCAGGAGGAAATACAACAACAAAGAGTTCAGAGTTAA
mRNA sequenceShow/hide mRNA sequence
ATGTCAGCATTTGGAATGACATATTATGATTCAAGAGTCGGTCAATCGTCAGACTTTGGAACAAGATATTATACTTCAGAGGCAGGTCAATCACCATCAAACTTTGGGCA
ACAGTACTATGATTTAGGGAGCGATCCATCGTCTTCATACATGTATGGTCATGGGCGTGGTCGCGGAGAGCATAATGAATATTTGTACTATGAAGTACCTGTAGCGATAC
CCGAGCAATTAGATGAGCAACAACAACAAGAGAATCAGGAGGAAATACAACAACAAAGAGTTCAGAGTTAA
Protein sequenceShow/hide protein sequence
MSAFGMTYYDSRVGQSSDFGTRYYTSEAGQSPSNFGQQYYDLGSDPSSSYMYGHGRGRGEHNEYLYYEVPVAIPEQLDEQQQQENQEEIQQQRVQS