; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

IVF0018470 (gene) of Melon (IVF77) v1 genome

Gene IDIVF0018470
OrganismCucumis melo ssp. agrestis cv. IVF77 (Melon (IVF77) v1)
DescriptionGag-asp_proteas domain-containing protein
Genome locationchr10:23578664..23578990
RNA-Seq ExpressionIVF0018470
SyntenyIVF0018470
Gene Ontology termsGO:0006278 - RNA-dependent DNA biosynthetic process (biological process)
GO:0003964 - RNA-directed DNA polymerase activity (molecular function)
InterPro domainsIPR021109 - Aspartic peptidase domain superfamily


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0062359.1 uncharacterized protein E6C27_scaffold154G001260 [Cucumis melo var. makuwa]5.08e-3265.79Show/hide
Query:  MGALKFLSPIQKKASHQKDAFEKGLMFVDAVIKSKTANSTMVDSVATYNFISE-QEAHQLELKIE-GTGKLKAVNFEALPIVGVSKRVSLKLGKWKVDVD
        M  LKFLS IQKK SHQKDAFEKGLMFVDA+I SK A STMVDS AT+NFISE +EA QLEL+I+  T K+KAVN +   IVGV KR+SLKL +W+ DV 
Subjt:  MGALKFLSPIQKKASHQKDAFEKGLMFVDAVIKSKTANSTMVDSVATYNFISE-QEAHQLELKIE-GTGKLKAVNFEALPIVGVSKRVSLKLGKWKVDVD

Query:  LDV----DVWMTLS
        L V    D   TLS
Subjt:  LDV----DVWMTLS

KAA0065393.1 gag-asp_proteas domain-containing protein [Cucumis melo var. makuwa]6.84e-69100Show/hide
Query:  MGALKFLSPIQKKASHQKDAFEKGLMFVDAVIKSKTANSTMVDSVATYNFISEQEAHQLELKIEGTGKLKAVNFEALPIVGVSKRVSLKLGKWKVDVDLD
        MGALKFLSPIQKKASHQKDAFEKGLMFVDAVIKSKTANSTMVDSVATYNFISEQEAHQLELKIEGTGKLKAVNFEALPIVGVSKRVSLKLGKWKVDVDLD
Subjt:  MGALKFLSPIQKKASHQKDAFEKGLMFVDAVIKSKTANSTMVDSVATYNFISEQEAHQLELKIEGTGKLKAVNFEALPIVGVSKRVSLKLGKWKVDVDLD

Query:  VDVWMTLS
        VDVWMTLS
Subjt:  VDVWMTLS

XP_022150099.1 uncharacterized protein LOC111018360 [Momordica charantia]2.30e-2967.65Show/hide
Query:  MGALKFLSPIQKKASHQKDAFEKGLMFVDAVIKSKTANSTMVDSVATYNFISEQEAHQLELKIE-GTGKLKAVNFEALPIVGVSKRVSLKLGKWKVDVDL
        M ALKFLS IQK+ +  K   EKGLMFVDA I    A STMVDS AT+NFISEQEA +L+L IE  TGK+K VNFEALPIVGVSKRV LKLG W   VD 
Subjt:  MGALKFLSPIQKKASHQKDAFEKGLMFVDAVIKSKTANSTMVDSVATYNFISEQEAHQLELKIE-GTGKLKAVNFEALPIVGVSKRVSLKLGKWKVDVDL

Query:  DV
         V
Subjt:  DV

XP_022154605.1 uncharacterized protein LOC111021829 [Momordica charantia]2.00e-2870.21Show/hide
Query:  MGALKFLSPIQKKASHQKDAFEKGLMFVDAVIKSKTANSTMVDSVATYNFISEQEAHQLELKIE-GTGKLKAVNFEALPIVGVSKRVSLKLGKW
        MGALKFLS IQK+ +  K   EKGLMFVDA I    A S MVDS AT+NFISEQEA +L+L IE  TGK+KAVN EALPIVGVSKRV+LKLG W
Subjt:  MGALKFLSPIQKKASHQKDAFEKGLMFVDAVIKSKTANSTMVDSVATYNFISEQEAHQLELKIE-GTGKLKAVNFEALPIVGVSKRVSLKLGKW

XP_023526326.1 uncharacterized protein LOC111789851 [Cucurbita pepo subsp. pepo]1.81e-2658.82Show/hide
Query:  MGALKFLSPIQKKASHQKDAFEKGLMFVDAVIKSKTANSTMVDSVATYNFISEQEAHQLELKI-EGTGKLKAVNFEALPIVGVSKRVSLKLGKWKVDVDL
        MGALKFLS +Q+K   +K   EKGLMFVDA I S+ + ST++DS AT+NFI++QEA +L L I +  GK+KAVN EALPIVGVSK V  K+G W  ++DL
Subjt:  MGALKFLSPIQKKASHQKDAFEKGLMFVDAVIKSKTANSTMVDSVATYNFISEQEAHQLELKI-EGTGKLKAVNFEALPIVGVSKRVSLKLGKWKVDVDL

Query:  DV
         V
Subjt:  DV

TrEMBL top hitse value%identityAlignment
A0A5A7V9H9 RT_RNaseH_2 domain-containing protein5.8e-2668.93Show/hide
Query:  MGALKFLSPIQKKASHQKDAFEKGLMFVDAVIKSKTANSTMVDSVATYNFISE-QEAHQLELKI-EGTGKLKAVNFEALPIVGVSKRVSLKLGKWKVDVD
        M  LKFLS IQKK SHQKDAFEKGLMFVDA+I SK A STMVDS AT+NFISE +EA QLEL+I + T K+KAVN +   IVGV KR+SLKL +W+ DV 
Subjt:  MGALKFLSPIQKKASHQKDAFEKGLMFVDAVIKSKTANSTMVDSVATYNFISE-QEAHQLELKI-EGTGKLKAVNFEALPIVGVSKRVSLKLGKWKVDVD

Query:  LDV
        L V
Subjt:  LDV

A0A5D3DZI9 Gag-asp_proteas domain-containing protein1.1e-51100Show/hide
Query:  MGALKFLSPIQKKASHQKDAFEKGLMFVDAVIKSKTANSTMVDSVATYNFISEQEAHQLELKIEGTGKLKAVNFEALPIVGVSKRVSLKLGKWKVDVDLD
        MGALKFLSPIQKKASHQKDAFEKGLMFVDAVIKSKTANSTMVDSVATYNFISEQEAHQLELKIEGTGKLKAVNFEALPIVGVSKRVSLKLGKWKVDVDLD
Subjt:  MGALKFLSPIQKKASHQKDAFEKGLMFVDAVIKSKTANSTMVDSVATYNFISEQEAHQLELKIEGTGKLKAVNFEALPIVGVSKRVSLKLGKWKVDVDLD

Query:  VDVWMTLS
        VDVWMTLS
Subjt:  VDVWMTLS

A0A6J1D906 Reverse transcriptase1.4e-2467.65Show/hide
Query:  MGALKFLSPIQKKASHQKDAFEKGLMFVDAVIKSKTANSTMVDSVATYNFISEQEAHQLELKIE-GTGKLKAVNFEALPIVGVSKRVSLKLGKWKVDVDL
        M ALKFLS IQK+ +  K   EKGLMFVDA I    A STMVDS AT+NFISEQEA +L+L IE  TGK+K VNFEALPIVGVSKRV LKLG W   VD 
Subjt:  MGALKFLSPIQKKASHQKDAFEKGLMFVDAVIKSKTANSTMVDSVATYNFISEQEAHQLELKIE-GTGKLKAVNFEALPIVGVSKRVSLKLGKWKVDVDL

Query:  DV
         V
Subjt:  DV

A0A6J1DK29 uncharacterized protein LOC1110218299.3e-2466.67Show/hide
Query:  MGALKFLSPIQKKASHQKDAFEKGLMFVDAVIKSKTANSTMVDSVATYNFISEQEAHQLELKIE-GTGKLKAVNFEALPIVGVSKRVSLKLGKWKVDVDL
        MGALKFLS IQK+ +  K   EKGLMFVDA I    A S MVDS AT+NFISEQEA +L+L IE  TGK+KAVN EALPIVGVSKRV+LKLG W    D 
Subjt:  MGALKFLSPIQKKASHQKDAFEKGLMFVDAVIKSKTANSTMVDSVATYNFISEQEAHQLELKIE-GTGKLKAVNFEALPIVGVSKRVSLKLGKWKVDVDL

Query:  DV
         V
Subjt:  DV

A0A6J1IA31 uncharacterized protein LOC1114714751.6e-2058.82Show/hide
Query:  MGALKFLSPIQKKASHQKDAFEKGLMFVDAVIKSKTANSTMVDSVATYNFISEQEAHQLELKI-EGTGKLKAVNFEALPIVGVSKRVSLKLGKWKVDVDL
        MGALKFLS +Q+K    K+  EKGLMFVDA I S+ + ST++DS AT+NFI +QEA +L L I +  GK+K VN EALPIVGVSKRV  K+G W  ++DL
Subjt:  MGALKFLSPIQKKASHQKDAFEKGLMFVDAVIKSKTANSTMVDSVATYNFISEQEAHQLELKI-EGTGKLKAVNFEALPIVGVSKRVSLKLGKWKVDVDL

Query:  DV
         V
Subjt:  DV

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGGTGCGTTAAAATTCTTATCACCAATCCAAAAGAAGGCATCTCACCAAAAGGATGCTTTTGAAAAGGGACTCATGTTTGTCGATGCAGTCATAAAGTCTAAAACCGC
AAATAGCACCATGGTGGATTCAGTTGCAACTTACAACTTTATTTCTGAACAAGAAGCACATCAGTTGGAGTTAAAAATTGAGGGCACAGGCAAGCTGAAAGCTGTGAATT
TTGAAGCCTTGCCCATTGTTGGTGTATCAAAAAGGGTATCTCTAAAATTAGGTAAATGGAAAGTAGATGTTGACTTAGACGTGGACGTATGGATGACTTTGTCGTAG
mRNA sequenceShow/hide mRNA sequence
ATGGGTGCGTTAAAATTCTTATCACCAATCCAAAAGAAGGCATCTCACCAAAAGGATGCTTTTGAAAAGGGACTCATGTTTGTCGATGCAGTCATAAAGTCTAAAACCGC
AAATAGCACCATGGTGGATTCAGTTGCAACTTACAACTTTATTTCTGAACAAGAAGCACATCAGTTGGAGTTAAAAATTGAGGGCACAGGCAAGCTGAAAGCTGTGAATT
TTGAAGCCTTGCCCATTGTTGGTGTATCAAAAAGGGTATCTCTAAAATTAGGTAAATGGAAAGTAGATGTTGACTTAGACGTGGACGTATGGATGACTTTGTCGTAG
Protein sequenceShow/hide protein sequence
MGALKFLSPIQKKASHQKDAFEKGLMFVDAVIKSKTANSTMVDSVATYNFISEQEAHQLELKIEGTGKLKAVNFEALPIVGVSKRVSLKLGKWKVDVDLDVDVWMTLS