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IVF0018509 (gene) of Melon (IVF77) v1 genome

Gene IDIVF0018509
OrganismCucumis melo ssp. agrestis cv. IVF77 (Melon (IVF77) v1)
DescriptionMediator of RNA polymerase II transcription subunit 12-like isoform X1
Genome locationchr09:14549946..14550698
RNA-Seq ExpressionIVF0018509
SyntenyIVF0018509
Gene Ontology termsGO:0010073 - meristem maintenance (biological process)
GO:0008270 - zinc ion binding (molecular function)
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0036767.1 serine/threonine-protein phosphatase 7 long form-like protein [Cucumis melo var. makuwa]1.18e-9895.45Show/hide
Query:  MSHLRSNNIRLRNVADDPQQVLNICNDNEQYMENIHYMYDVPIVPAPVQRRRPLVQEPDQLEEVDQHGEEVPPMTQAQSEHNYISPVMMMPTFGTTYYDS
        MSHLRSNNIRLRNVADDPQQVLNICNDNEQYMENIHYMYDVPIVPAPVQRRRPLVQEPDQLEEVDQHG+EVPPMTQ QSEHNY+SPVMMMPTFGTTYYDS
Subjt:  MSHLRSNNIRLRNVADDPQQVLNICNDNEQYMENIHYMYDVPIVPAPVQRRRPLVQEPDQLEEVDQHGEEVPPMTQAQSEHNYISPVMMMPTFGTTYYDS

Query:  GVGQSSDFGRGYYNSEAGQSSTDFGQQYYDLGCDPSSSYMHGHGRGRGEHNEYF
        GVGQSSDFGRGYYNS+AGQSSTDFGQQYYDLG DPSSSYMHGHGRGRG+HNEY 
Subjt:  GVGQSSDFGRGYYNSEAGQSSTDFGQQYYDLGCDPSSSYMHGHGRGRGEHNEYF

KAA0037866.1 mediator of RNA polymerase II transcription subunit 12-like isoform X1 [Cucumis melo var. makuwa]1.46e-10580Show/hide
Query:  MSHLRSNNIRLRNVADDPQQVLNICNDNEQYMENIHYMYDVPIVPAPVQRRRPLVQEPDQLEEVDQHGEEVPPMTQAQ--SEHNYISPVMMMPTFGTTYY
        MSHLRSNNIR RNVADDPQ  LNICNDNEQY+ENIHYMYDV IVPAPVQR+RPLVQE DQLEEVDQH EEVPP+TQ Q  SEH+Y+SP+MMMPTFGTTYY
Subjt:  MSHLRSNNIRLRNVADDPQQVLNICNDNEQYMENIHYMYDVPIVPAPVQRRRPLVQEPDQLEEVDQHGEEVPPMTQAQ--SEHNYISPVMMMPTFGTTYY

Query:  DSGVGQSSDFGRGYYNSEAGQSSTDFGQQYYDLGCDPSSSYMHGHGRGRGEHNEYFNKRMQQ-YPGNQMSNNNKRIRRKYNNREFKVDDDNQLEIVDVQV
        D GVGQSSDFGR YYNSEAG SSTDFGQQYYDLG +PSSSYMHGHGRGRGEHNEY    +    P        + IRRKYNN+EF+VDDDNQLEIVDVQV
Subjt:  DSGVGQSSDFGRGYYNSEAGQSSTDFGQQYYDLGCDPSSSYMHGHGRGRGEHNEYFNKRMQQ-YPGNQMSNNNKRIRRKYNNREFKVDDDNQLEIVDVQV

Query:  VEHIDFFSFE
        VEHIDFF FE
Subjt:  VEHIDFFSFE

TYK09816.1 mediator of RNA polymerase II transcription subunit 12-like isoform X1 [Cucumis melo var. makuwa]3.09e-10880Show/hide
Query:  MSHLRSNNIRLRNVADDPQQVLNICNDNEQYMENIHYMYDVPIVPAPVQRRRPLVQEPDQLEEVDQHGEEVPPMTQAQ--SEHNYISPVMMMPTFGTTYY
        MSHLRSNNIR RNVADDPQ  LNICNDNEQY+ENIHYMYDV IVPAPVQR+RPLVQE DQLEEVDQH EEVPP+TQ Q  SEH+Y+SP+MMMPTFGTTYY
Subjt:  MSHLRSNNIRLRNVADDPQQVLNICNDNEQYMENIHYMYDVPIVPAPVQRRRPLVQEPDQLEEVDQHGEEVPPMTQAQ--SEHNYISPVMMMPTFGTTYY

Query:  DSGVGQSSDFGRGYYNSEAGQSSTDFGQQYYDLGCDPSSSYMHGHGRGRGEHNEYFNKRMQQ-YPGNQMSNNNKRIRRKYNNREFKVDDDNQLEIVDVQV
        D GVGQSSDFGR YYNSEAG SSTDFGQQYYDLG +PSSSYMHGHGRGRGEHNEY    +    P        + IRRKYNN+EF+VDDDNQLEIVDVQV
Subjt:  DSGVGQSSDFGRGYYNSEAGQSSTDFGQQYYDLGCDPSSSYMHGHGRGRGEHNEYFNKRMQQ-YPGNQMSNNNKRIRRKYNNREFKVDDDNQLEIVDVQV

Query:  VEHIDFFSFE
        VEHIDFF FE
Subjt:  VEHIDFFSFE

XP_008449513.1 PREDICTED: mediator of RNA polymerase II transcription subunit 12-like isoform X1 [Cucumis melo]7.44e-9993.59Show/hide
Query:  MSHLRSNNIRLRNVADDPQQVLNICNDNEQYMENIHYMYDVPIVPAPVQRRRPLVQEPDQLEEVDQHGEEVPPMTQAQ--SEHNYISPVMMMPTFGTTYY
        MSHLRSNN RLRN+ADDPQQVLNICNDNEQYMENIHYMYDVPIVPAPVQRRRPLVQE DQLEEVDQHGEEVPPMTQ Q  SEHNY+SPVMMMPTFG TYY
Subjt:  MSHLRSNNIRLRNVADDPQQVLNICNDNEQYMENIHYMYDVPIVPAPVQRRRPLVQEPDQLEEVDQHGEEVPPMTQAQ--SEHNYISPVMMMPTFGTTYY

Query:  DSGVGQSSDFGRGYYNSEAGQSSTDFGQQYYDLGCDPSSSYMHGHGRGRGEHNEYF
        DSGVGQSSDFGRGYYNSEAGQSSTDFGQQYYDLG DPSSSYMHGHGRGRGEHNEY 
Subjt:  DSGVGQSSDFGRGYYNSEAGQSSTDFGQQYYDLGCDPSSSYMHGHGRGRGEHNEYF

XP_016900498.1 PREDICTED: GATA zinc finger domain-containing protein 10-like isoform X2 [Cucumis melo]3.78e-9993.59Show/hide
Query:  MSHLRSNNIRLRNVADDPQQVLNICNDNEQYMENIHYMYDVPIVPAPVQRRRPLVQEPDQLEEVDQHGEEVPPMTQAQ--SEHNYISPVMMMPTFGTTYY
        MSHLRSNN RLRN+ADDPQQVLNICNDNEQYMENIHYMYDVPIVPAPVQRRRPLVQE DQLEEVDQHGEEVPPMTQ Q  SEHNY+SPVMMMPTFG TYY
Subjt:  MSHLRSNNIRLRNVADDPQQVLNICNDNEQYMENIHYMYDVPIVPAPVQRRRPLVQEPDQLEEVDQHGEEVPPMTQAQ--SEHNYISPVMMMPTFGTTYY

Query:  DSGVGQSSDFGRGYYNSEAGQSSTDFGQQYYDLGCDPSSSYMHGHGRGRGEHNEYF
        DSGVGQSSDFGRGYYNSEAGQSSTDFGQQYYDLG DPSSSYMHGHGRGRGEHNEY 
Subjt:  DSGVGQSSDFGRGYYNSEAGQSSTDFGQQYYDLGCDPSSSYMHGHGRGRGEHNEYF

TrEMBL top hitse value%identityAlignment
A0A5A7T598 Serine/threonine-protein phosphatase 7 long form-like protein3.0e-7996.08Show/hide
Query:  MSHLRSNNIRLRNVADDPQQVLNICNDNEQYMENIHYMYDVPIVPAPVQRRRPLVQEPDQLEEVDQHGEEVPPMTQAQSEHNYISPVMMMPTFGTTYYDS
        MSHLRSNNIRLRNVADDPQQVLNICNDNEQYMENIHYMYDVPIVPAPVQRRRPLVQEPDQLEEVDQHG+EVPPMTQ QSEHNY+SPVMMMPTFGTTYYDS
Subjt:  MSHLRSNNIRLRNVADDPQQVLNICNDNEQYMENIHYMYDVPIVPAPVQRRRPLVQEPDQLEEVDQHGEEVPPMTQAQSEHNYISPVMMMPTFGTTYYDS

Query:  GVGQSSDFGRGYYNSEAGQSSTDFGQQYYDLGCDPSSSYMHGHGRGRGEHNEY
        GVGQSSDFGRGYYNS+AGQSSTDFGQQYYDLG DPSSSYMHGHGRGRG+HNEY
Subjt:  GVGQSSDFGRGYYNSEAGQSSTDFGQQYYDLGCDPSSSYMHGHGRGRGEHNEY

A0A5A7T6Q6 Mediator of RNA polymerase II transcription subunit 12-like isoform X11.1e-8480Show/hide
Query:  MSHLRSNNIRLRNVADDPQQVLNICNDNEQYMENIHYMYDVPIVPAPVQRRRPLVQEPDQLEEVDQHGEEVPPM--TQAQSEHNYISPVMMMPTFGTTYY
        MSHLRSNNIR RNVADDPQ  LNICNDNEQY+ENIHYMYDV IVPAPVQR+RPLVQE DQLEEVDQH EEVPP+  TQ QSEH+Y+SP+MMMPTFGTTYY
Subjt:  MSHLRSNNIRLRNVADDPQQVLNICNDNEQYMENIHYMYDVPIVPAPVQRRRPLVQEPDQLEEVDQHGEEVPPM--TQAQSEHNYISPVMMMPTFGTTYY

Query:  DSGVGQSSDFGRGYYNSEAGQSSTDFGQQYYDLGCDPSSSYMHGHGRGRGEHNEY-FNKRMQQYPGNQMSNNNKRIRRKYNNREFKVDDDNQLEIVDVQV
        D GVGQSSDFGR YYNSEAG SSTDFGQQYYDLG +PSSSYMHGHGRGRGEHNEY + +     P        + IRRKYNN+EF+VDDDNQLEIVDVQV
Subjt:  DSGVGQSSDFGRGYYNSEAGQSSTDFGQQYYDLGCDPSSSYMHGHGRGRGEHNEY-FNKRMQQYPGNQMSNNNKRIRRKYNNREFKVDDDNQLEIVDVQV

Query:  VEHIDFFSFE
        VEHIDFF FE
Subjt:  VEHIDFFSFE

A0A5A7VIP6 Mediator of RNA polymerase II transcription subunit 12-like isoform X11.0e-7997.39Show/hide
Query:  MSHLRSNNIRLRNVADDPQQVLNICNDNEQYMENIHYMYDVPIVPAPVQRRRPLVQEPDQLEEVDQHGEEVPPMTQAQSEHNYISPVMMMPTFGTTYYDS
        MSHLRSNNIRLRNVADDPQQVLNICNDNEQYMENIHYMYDVPIVPAPVQRRRPLVQEPDQLEEVDQHGEEVPPMTQ QSEHNY+SPVMMMPTFGTTYYDS
Subjt:  MSHLRSNNIRLRNVADDPQQVLNICNDNEQYMENIHYMYDVPIVPAPVQRRRPLVQEPDQLEEVDQHGEEVPPMTQAQSEHNYISPVMMMPTFGTTYYDS

Query:  GVGQSSDFGRGYYNSEAGQSSTDFGQQYYDLGCDPSSSYMHGHGRGRGEHNEY
         VGQSSDFGRGYYNSEAGQSSTDFGQQYYDLG DPSSSYMHGHGRGRGEHNEY
Subjt:  GVGQSSDFGRGYYNSEAGQSSTDFGQQYYDLGCDPSSSYMHGHGRGRGEHNEY

A0A5D3BAB0 Serine/threonine-protein phosphatase 7 long form-like protein3.0e-7996.08Show/hide
Query:  MSHLRSNNIRLRNVADDPQQVLNICNDNEQYMENIHYMYDVPIVPAPVQRRRPLVQEPDQLEEVDQHGEEVPPMTQAQSEHNYISPVMMMPTFGTTYYDS
        MSHLRSNNIRLRNVADDPQQVLNICNDNEQYMENIHYMYDVPIVPAPVQRRRPLVQEPDQLEEVDQHG+EVPPMTQ QSEHNY+SPVMMMPTFGTTYYDS
Subjt:  MSHLRSNNIRLRNVADDPQQVLNICNDNEQYMENIHYMYDVPIVPAPVQRRRPLVQEPDQLEEVDQHGEEVPPMTQAQSEHNYISPVMMMPTFGTTYYDS

Query:  GVGQSSDFGRGYYNSEAGQSSTDFGQQYYDLGCDPSSSYMHGHGRGRGEHNEY
        GVGQSSDFGRGYYNS+AGQSSTDFGQQYYDLG DPSSSYMHGHGRGRG+HNEY
Subjt:  GVGQSSDFGRGYYNSEAGQSSTDFGQQYYDLGCDPSSSYMHGHGRGRGEHNEY

A0A5D3CHF6 Mediator of RNA polymerase II transcription subunit 12-like isoform X11.1e-8480Show/hide
Query:  MSHLRSNNIRLRNVADDPQQVLNICNDNEQYMENIHYMYDVPIVPAPVQRRRPLVQEPDQLEEVDQHGEEVPPM--TQAQSEHNYISPVMMMPTFGTTYY
        MSHLRSNNIR RNVADDPQ  LNICNDNEQY+ENIHYMYDV IVPAPVQR+RPLVQE DQLEEVDQH EEVPP+  TQ QSEH+Y+SP+MMMPTFGTTYY
Subjt:  MSHLRSNNIRLRNVADDPQQVLNICNDNEQYMENIHYMYDVPIVPAPVQRRRPLVQEPDQLEEVDQHGEEVPPM--TQAQSEHNYISPVMMMPTFGTTYY

Query:  DSGVGQSSDFGRGYYNSEAGQSSTDFGQQYYDLGCDPSSSYMHGHGRGRGEHNEY-FNKRMQQYPGNQMSNNNKRIRRKYNNREFKVDDDNQLEIVDVQV
        D GVGQSSDFGR YYNSEAG SSTDFGQQYYDLG +PSSSYMHGHGRGRGEHNEY + +     P        + IRRKYNN+EF+VDDDNQLEIVDVQV
Subjt:  DSGVGQSSDFGRGYYNSEAGQSSTDFGQQYYDLGCDPSSSYMHGHGRGRGEHNEY-FNKRMQQYPGNQMSNNNKRIRRKYNNREFKVDDDNQLEIVDVQV

Query:  VEHIDFFSFE
        VEHIDFF FE
Subjt:  VEHIDFFSFE

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGAGTCATCTGAGATCAAACAATATTAGACTTCGGAATGTTGCAGATGATCCACAACAGGTTCTAAATATATGCAACGATAACGAGCAGTATATGGAGAACATCCACTA
TATGTACGATGTCCCTATTGTACCTGCTCCTGTTCAGAGGAGACGTCCTCTAGTGCAAGAGCCCGATCAATTGGAAGAAGTTGACCAACACGGGGAAGAAGTGCCTCCAA
TGACACAGGCACAAAGCGAGCATAATTACATTAGTCCAGTAATGATGATGCCAACATTTGGAACGACATATTATGATTCAGGAGTCGGTCAATCGTCAGACTTTGGAAGA
GGATATTACAATTCAGAGGCAGGTCAATCATCAACGGACTTTGGGCAACAATACTATGATTTAGGGTGCGATCCATCGTCTTCATACATGCATGGTCACGGGCGTGGTCG
TGGAGAACATAATGAATATTTCAACAAGAGAATGCAGCAGTACCCGGGCAATCAGATGAGCAACAACAACAAGAGAATCAGGAGGAAATACAACAACAGAGAGTTCAAAG
TCGACGACGACAACCAGCTAGAAATCGTCGACGTCCAGGTTGTGGAACACATTGATTTTTTTTCCTTTGAATGA
mRNA sequenceShow/hide mRNA sequence
ATGAGTCATCTGAGATCAAACAATATTAGACTTCGGAATGTTGCAGATGATCCACAACAGGTTCTAAATATATGCAACGATAACGAGCAGTATATGGAGAACATCCACTA
TATGTACGATGTCCCTATTGTACCTGCTCCTGTTCAGAGGAGACGTCCTCTAGTGCAAGAGCCCGATCAATTGGAAGAAGTTGACCAACACGGGGAAGAAGTGCCTCCAA
TGACACAGGCACAAAGCGAGCATAATTACATTAGTCCAGTAATGATGATGCCAACATTTGGAACGACATATTATGATTCAGGAGTCGGTCAATCGTCAGACTTTGGAAGA
GGATATTACAATTCAGAGGCAGGTCAATCATCAACGGACTTTGGGCAACAATACTATGATTTAGGGTGCGATCCATCGTCTTCATACATGCATGGTCACGGGCGTGGTCG
TGGAGAACATAATGAATATTTCAACAAGAGAATGCAGCAGTACCCGGGCAATCAGATGAGCAACAACAACAAGAGAATCAGGAGGAAATACAACAACAGAGAGTTCAAAG
TCGACGACGACAACCAGCTAGAAATCGTCGACGTCCAGGTTGTGGAACACATTGATTTTTTTTCCTTTGAATGA
Protein sequenceShow/hide protein sequence
MSHLRSNNIRLRNVADDPQQVLNICNDNEQYMENIHYMYDVPIVPAPVQRRRPLVQEPDQLEEVDQHGEEVPPMTQAQSEHNYISPVMMMPTFGTTYYDSGVGQSSDFGR
GYYNSEAGQSSTDFGQQYYDLGCDPSSSYMHGHGRGRGEHNEYFNKRMQQYPGNQMSNNNKRIRRKYNNREFKVDDDNQLEIVDVQVVEHIDFFSFE