; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

IVF0018529 (gene) of Melon (IVF77) v1 genome

Gene IDIVF0018529
OrganismCucumis melo ssp. agrestis cv. IVF77 (Melon (IVF77) v1)
DescriptionProtein Ycf2-like
Genome locationchr08:26355934..26356236
RNA-Seq ExpressionIVF0018529
SyntenyIVF0018529
Gene Ontology termsGO:0006278 - RNA-dependent DNA biosynthetic process (biological process)
GO:0006508 - proteolysis (biological process)
GO:0015074 - DNA integration (biological process)
GO:0090305 - nucleic acid phosphodiester bond hydrolysis (biological process)
GO:0016021 - integral component of membrane (cellular component)
GO:0003676 - nucleic acid binding (molecular function)
GO:0003964 - RNA-directed DNA polymerase activity (molecular function)
GO:0004190 - aspartic-type endopeptidase activity (molecular function)
GO:0004519 - endonuclease activity (molecular function)
GO:0008270 - zinc ion binding (molecular function)
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0037804.1 protein Ycf2-like [Cucumis melo var. makuwa]1.81e-3686.75Show/hide
Query:  AFEKHLEKVEEDQEEDDVEDLNLDSSNPTVLGKRDDDEDKDEKWLTDESRAESSRGQDDGQSKVAKSETPPTAGDKDSSPYKA
        AFE+HL+K +EDQEEDDVEDLNLDSSNP VLGKRDDDEDKDEK L DESRAESSRGQD G+SKVAKSETPPTA DKDSS YKA
Subjt:  AFEKHLEKVEEDQEEDDVEDLNLDSSNPTVLGKRDDDEDKDEKWLTDESRAESSRGQDDGQSKVAKSETPPTAGDKDSSPYKA
KAA0045552.1 protein Ycf2-like [Cucumis melo var. makuwa]9.58e-3690.24Show/hide
Query:  AFEKHLEKVEEDQEEDDVEDLNLDSSNPTVLGKRDDDEDKDEKWLTDESRAESSRGQDDGQSKVAKSETPPTAGDKDSSPYK
        AF++HL+KVEEDQEEDDVEDLNLDSSNPTVLGKRDDDEDKD K L DESR ESSRGQDDGQSKVAKSETPPTAGDKDSS YK
Subjt:  AFEKHLEKVEEDQEEDDVEDLNLDSSNPTVLGKRDDDEDKDEKWLTDESRAESSRGQDDGQSKVAKSETPPTAGDKDSSPYK
KAA0054156.1 protein Ycf2-like [Cucumis melo var. makuwa]2.56e-3687.95Show/hide
Query:  AFEKHLEKVEEDQEEDDVEDLNLDSSNPTVLGKRDDDEDKDEKWLTDESRAESSRGQDDGQSKVAKSETPPTAGDKDSSPYKA
        AFE+HL+KVEEDQEEDDVEDL LDSSNPTVLGKRDDDEDKD K L DESR ESS+GQD GQSK+AKSETPPTAGDKDSSPYKA
Subjt:  AFEKHLEKVEEDQEEDDVEDLNLDSSNPTVLGKRDDDEDKDEKWLTDESRAESSRGQDDGQSKVAKSETPPTAGDKDSSPYKA
KAA0065546.1 protein Ycf2-like [Cucumis melo var. makuwa]1.33e-5899Show/hide
Query:  MAFEKHLEKVEEDQEEDDVEDLNLDSSNPTVLGKRDDDEDKDEKWLTDESRAESSRGQDDGQSKVAKSETPPTAGDKDSSPYKAKKKMKLLKMCIIHIID
        MAFEKHLEKVE DQEEDDVEDLNLDSSNPTVLGKRDDDEDKDEKWLTDESRAESSRGQDDGQSKVAKSETPPTAGDKDSSPYKAKKKMKLLKMCIIHIID
Subjt:  MAFEKHLEKVEEDQEEDDVEDLNLDSSNPTVLGKRDDDEDKDEKWLTDESRAESSRGQDDGQSKVAKSETPPTAGDKDSSPYKAKKKMKLLKMCIIHIID
TYK29271.1 protein Ycf2-like [Cucumis melo var. makuwa]1.14e-59100Show/hide
Query:  MAFEKHLEKVEEDQEEDDVEDLNLDSSNPTVLGKRDDDEDKDEKWLTDESRAESSRGQDDGQSKVAKSETPPTAGDKDSSPYKAKKKMKLLKMCIIHIID
        MAFEKHLEKVEEDQEEDDVEDLNLDSSNPTVLGKRDDDEDKDEKWLTDESRAESSRGQDDGQSKVAKSETPPTAGDKDSSPYKAKKKMKLLKMCIIHIID
Subjt:  MAFEKHLEKVEEDQEEDDVEDLNLDSSNPTVLGKRDDDEDKDEKWLTDESRAESSRGQDDGQSKVAKSETPPTAGDKDSSPYKAKKKMKLLKMCIIHIID
TrEMBL top hitse value%identityAlignment
A0A5A7TQC0 Protein Ycf2-like1.5e-2888.1Show/hide
Query:  AFEKHLEKVEEDQEEDDVEDLNLDSSNPTVLGKRDDDEDKDEKWLTDESRAESSRGQDDGQSKVAKSETPPTAGDKDSSPYKAK
        AF++HL+KVEEDQEEDDVEDLNLDSSNPTVLGKRDDDEDKD K L DESR ESSRGQDDGQSKVAKSETPPTAGDKDSS YK +
Subjt:  AFEKHLEKVEEDQEEDDVEDLNLDSSNPTVLGKRDDDEDKDEKWLTDESRAESSRGQDDGQSKVAKSETPPTAGDKDSSPYKAK
A0A5A7UIQ5 Protein Ycf2-like3.4e-2884.88Show/hide
Query:  AFEKHLEKVEEDQEEDDVEDLNLDSSNPTVLGKRDDDEDKDEKWLTDESRAESSRGQDDGQSKVAKSETPPTAGDKDSSPYKAKKK
        AFE+HL+KVEEDQEEDDVEDL LDSSNPTVLGKRDDDEDKD K L DESR ESS+GQD GQSK+AKSETPPTAGDKDSSPYKA ++
Subjt:  AFEKHLEKVEEDQEEDDVEDLNLDSSNPTVLGKRDDDEDKDEKWLTDESRAESSRGQDDGQSKVAKSETPPTAGDKDSSPYKAKKK
A0A5A7VGU0 Protein Ycf2-like4.4e-4499Show/hide
Query:  MAFEKHLEKVEEDQEEDDVEDLNLDSSNPTVLGKRDDDEDKDEKWLTDESRAESSRGQDDGQSKVAKSETPPTAGDKDSSPYKAKKKMKLLKMCIIHIID
        MAFEKHLEKVE DQEEDDVEDLNLDSSNPTVLGKRDDDEDKDEKWLTDESRAESSRGQDDGQSKVAKSETPPTAGDKDSSPYKAKKKMKLLKMCIIHIID
Subjt:  MAFEKHLEKVEEDQEEDDVEDLNLDSSNPTVLGKRDDDEDKDEKWLTDESRAESSRGQDDGQSKVAKSETPPTAGDKDSSPYKAKKKMKLLKMCIIHIID
A0A5D3DZ94 Protein Ycf2-like1.5e-2888.1Show/hide
Query:  AFEKHLEKVEEDQEEDDVEDLNLDSSNPTVLGKRDDDEDKDEKWLTDESRAESSRGQDDGQSKVAKSETPPTAGDKDSSPYKAK
        AF++HL+KVEEDQEEDDVEDLNLDSSNPTVLGKRDDDEDKD K L DESR ESSRGQDDGQSKVAKSETPPTAGDKDSS YK +
Subjt:  AFEKHLEKVEEDQEEDDVEDLNLDSSNPTVLGKRDDDEDKDEKWLTDESRAESSRGQDDGQSKVAKSETPPTAGDKDSSPYKAK
A0A5D3E0W5 Protein Ycf2-like6.8e-45100Show/hide
Query:  MAFEKHLEKVEEDQEEDDVEDLNLDSSNPTVLGKRDDDEDKDEKWLTDESRAESSRGQDDGQSKVAKSETPPTAGDKDSSPYKAKKKMKLLKMCIIHIID
        MAFEKHLEKVEEDQEEDDVEDLNLDSSNPTVLGKRDDDEDKDEKWLTDESRAESSRGQDDGQSKVAKSETPPTAGDKDSSPYKAKKKMKLLKMCIIHIID
Subjt:  MAFEKHLEKVEEDQEEDDVEDLNLDSSNPTVLGKRDDDEDKDEKWLTDESRAESSRGQDDGQSKVAKSETPPTAGDKDSSPYKAKKKMKLLKMCIIHIID
SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGCGTTTGAAAAGCACCTTGAGAAGGTGGAGGAGGACCAAGAAGAAGATGATGTTGAAGATTTGAACTTGGATTCAAGCAATCCAACAGTGCTTGGAAAAAGGGATGA
CGATGAAGACAAAGACGAAAAATGGCTTACGGATGAAAGTCGAGCAGAAAGTTCGAGAGGGCAAGATGATGGTCAATCTAAAGTGGCAAAATCAGAGACACCACCAACAG
CCGGAGATAAAGATTCTTCGCCGTATAAGGCAAAGAAAAAAATGAAACTGTTGAAGATGTGTATAATACATATTATAGACTAA
mRNA sequenceShow/hide mRNA sequence
ATGGCGTTTGAAAAGCACCTTGAGAAGGTGGAGGAGGACCAAGAAGAAGATGATGTTGAAGATTTGAACTTGGATTCAAGCAATCCAACAGTGCTTGGAAAAAGGGATGA
CGATGAAGACAAAGACGAAAAATGGCTTACGGATGAAAGTCGAGCAGAAAGTTCGAGAGGGCAAGATGATGGTCAATCTAAAGTGGCAAAATCAGAGACACCACCAACAG
CCGGAGATAAAGATTCTTCGCCGTATAAGGCAAAGAAAAAAATGAAACTGTTGAAGATGTGTATAATACATATTATAGACTAA
Protein sequenceShow/hide protein sequence
MAFEKHLEKVEEDQEEDDVEDLNLDSSNPTVLGKRDDDEDKDEKWLTDESRAESSRGQDDGQSKVAKSETPPTAGDKDSSPYKAKKKMKLLKMCIIHIID