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IVF0018530 (gene) of Melon (IVF77) v1 genome

Gene IDIVF0018530
OrganismCucumis melo ssp. agrestis cv. IVF77 (Melon (IVF77) v1)
DescriptionRetrotransposon protein
Genome locationchr01:19237009..19237176
RNA-Seq ExpressionIVF0018530
SyntenyIVF0018530
Gene Ontology termsGO:0016788 - hydrolase activity, acting on ester bonds (molecular function)
GO:0046872 - metal ion binding (molecular function)
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0032832.1 retrotransposon protein [Cucumis melo var. makuwa]4.95e-2785.45Show/hide
Query:  MTYCNDVDDVDEEDSTYVMTTASEDIHYIKTTNEWSQWRDELAESMFTDCQLRNA
        MTYC D+DDVDE DSTY  TTASEDIHYI+ TNEWSQWRDELAESMFTD QLRNA
Subjt:  MTYCNDVDDVDEEDSTYVMTTASEDIHYIKTTNEWSQWRDELAESMFTDCQLRNA
KAA0054051.1 retrotransposon protein [Cucumis melo var. makuwa]7.04e-2785.45Show/hide
Query:  MTYCNDVDDVDEEDSTYVMTTASEDIHYIKTTNEWSQWRDELAESMFTDCQLRNA
        MTYC+D+DDVDE DS Y  TTASEDIHYI+TTNEWSQWRDELAESMFTD QLRNA
Subjt:  MTYCNDVDDVDEEDSTYVMTTASEDIHYIKTTNEWSQWRDELAESMFTDCQLRNA
KAA0056509.1 retrotransposon protein [Cucumis melo var. makuwa]1.49e-31100Show/hide
Query:  MTYCNDVDDVDEEDSTYVMTTASEDIHYIKTTNEWSQWRDELAESMFTDCQLRNA
        MTYCNDVDDVDEEDSTYVMTTASEDIHYIKTTNEWSQWRDELAESMFTDCQLRNA
Subjt:  MTYCNDVDDVDEEDSTYVMTTASEDIHYIKTTNEWSQWRDELAESMFTDCQLRNA
KAA0062210.1 retrotransposon protein [Cucumis melo var. makuwa]2.67e-2487.27Show/hide
Query:  MTYCNDVDDVDEEDSTYVMTTASEDIHYIKTTNEWSQWRDELAESMFTDCQLRNA
        MTYC DVDDVDE DSTY  TT SEDIHYI+TTNEWSQWRDELAESMFTD QLRNA
Subjt:  MTYCNDVDDVDEEDSTYVMTTASEDIHYIKTTNEWSQWRDELAESMFTDCQLRNA
TYK22655.1 retrotransposon protein [Cucumis melo var. makuwa]4.78e-2583.64Show/hide
Query:  MTYCNDVDDVDEEDSTYVMTTASEDIHYIKTTNEWSQWRDELAESMFTDCQLRNA
        MTYC+DVDD DEEDS Y  TTASEDI YI+TTNEWSQWRDEL ESMFTD QLRNA
Subjt:  MTYCNDVDDVDEEDSTYVMTTASEDIHYIKTTNEWSQWRDELAESMFTDCQLRNA
TrEMBL top hitse value%identityAlignment
A0A5A7SNY4 Retrotransposon protein1.0e-1885.45Show/hide
Query:  MTYCNDVDDVDEEDSTYVMTTASEDIHYIKTTNEWSQWRDELAESMFTDCQLRNA
        MTYC D+DDVDE DSTY  TTASEDIHYI+ TNEWSQWRDELAESMFTD QLRNA
Subjt:  MTYCNDVDDVDEEDSTYVMTTASEDIHYIKTTNEWSQWRDELAESMFTDCQLRNA
A0A5A7V4J1 Retrotransposon protein1.3e-1887.27Show/hide
Query:  MTYCNDVDDVDEEDSTYVMTTASEDIHYIKTTNEWSQWRDELAESMFTDCQLRNA
        MTYC DVDDVDE DSTY  TT SEDIHYI+TTNEWSQWRDELAESMFTD QLRNA
Subjt:  MTYCNDVDDVDEEDSTYVMTTASEDIHYIKTTNEWSQWRDELAESMFTDCQLRNA
A0A5D3BDZ0 Retrotransposon protein1.3e-1885.45Show/hide
Query:  MTYCNDVDDVDEEDSTYVMTTASEDIHYIKTTNEWSQWRDELAESMFTDCQLRNA
        MTYC+D+DDVDE DS Y  TTASEDIHYI+TTNEWSQWRDELAESMFTD QLRNA
Subjt:  MTYCNDVDDVDEEDSTYVMTTASEDIHYIKTTNEWSQWRDELAESMFTDCQLRNA
A0A5D3CP63 Retrotransposon protein1.4e-23100Show/hide
Query:  MTYCNDVDDVDEEDSTYVMTTASEDIHYIKTTNEWSQWRDELAESMFTDCQLRNA
        MTYCNDVDDVDEEDSTYVMTTASEDIHYIKTTNEWSQWRDELAESMFTDCQLRNA
Subjt:  MTYCNDVDDVDEEDSTYVMTTASEDIHYIKTTNEWSQWRDELAESMFTDCQLRNA
A0A5D3CUG9 Retrotransposon protein1.7e-1887.27Show/hide
Query:  MTYCNDVDDVDEEDSTYVMTTASEDIHYIKTTNEWSQWRDELAESMFTDCQLRNA
        MTYC DVDDVDE DSTY  T ASEDIHYI+TTNEWSQWRDELAESMFTD QLRNA
Subjt:  MTYCNDVDDVDEEDSTYVMTTASEDIHYIKTTNEWSQWRDELAESMFTDCQLRNA
SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGACATATTGCAATGACGTTGACGACGTGGATGAGGAGGACTCCACGTATGTGATGACCACCGCTTCAGAAGACATTCACTACATTAAGACGACAAATGAGTGGTCTCA
GTGGCGCGACGAACTAGCCGAATCGATGTTCACTGATTGCCAGTTGCGTAACGCTTAG
mRNA sequenceShow/hide mRNA sequence
ATGACATATTGCAATGACGTTGACGACGTGGATGAGGAGGACTCCACGTATGTGATGACCACCGCTTCAGAAGACATTCACTACATTAAGACGACAAATGAGTGGTCTCA
GTGGCGCGACGAACTAGCCGAATCGATGTTCACTGATTGCCAGTTGCGTAACGCTTAG
Protein sequenceShow/hide protein sequence
MTYCNDVDDVDEEDSTYVMTTASEDIHYIKTTNEWSQWRDELAESMFTDCQLRNA