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IVF0018531 (gene) of Melon (IVF77) v1 genome

Gene IDIVF0018531
OrganismCucumis melo ssp. agrestis cv. IVF77 (Melon (IVF77) v1)
DescriptionRetrotransposon protein
Genome locationchr05:21283241..21283408
RNA-Seq ExpressionIVF0018531
SyntenyIVF0018531
Gene Ontology termsGO:0046872 - metal ion binding (molecular function)
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0058871.1 retrotransposon protein [Cucumis melo var. makuwa]1.07e-2892.73Show/hide
Query:  MTYCDDVDDEDEEDSMYATTTASEDIQYIETTNEWSQWRDDLAESMFTEWQLRNA
        MTYC+DVDDEDE DS Y TTTASEDIQYIETTNEWSQWRDDLAESMFTEWQLRNA
Subjt:  MTYCDDVDDEDEEDSMYATTTASEDIQYIETTNEWSQWRDDLAESMFTEWQLRNA

KAA0062284.1 retrotransposon protein [Cucumis melo var. makuwa]9.21e-3094.55Show/hide
Query:  MTYCDDVDDEDEEDSMYATTTASEDIQYIETTNEWSQWRDDLAESMFTEWQLRNA
        MTYCDD+DDEDE DS YATTTASEDIQYIETTNEWSQWRDDLAESMFTEWQLRNA
Subjt:  MTYCDDVDDEDEEDSMYATTTASEDIQYIETTNEWSQWRDDLAESMFTEWQLRNA

TYK04228.1 retrotransposon protein [Cucumis melo var. makuwa]1.04e-2890.91Show/hide
Query:  MTYCDDVDDEDEEDSMYATTTASEDIQYIETTNEWSQWRDDLAESMFTEWQLRNA
        MTYCD+VDD+DE DS YATTTASEDIQYIETTNEWSQWRDDLAESMFTEWQLRN 
Subjt:  MTYCDDVDDEDEEDSMYATTTASEDIQYIETTNEWSQWRDDLAESMFTEWQLRNA

TYK05336.1 retrotransposon protein [Cucumis melo var. makuwa]2.16e-2890.91Show/hide
Query:  MTYCDDVDDEDEEDSMYATTTASEDIQYIETTNEWSQWRDDLAESMFTEWQLRNA
        MTYC+DVDDEDE DS YATTTASEDIQYIETTNEWSQWRDDLAESMFT+WQLRN+
Subjt:  MTYCDDVDDEDEEDSMYATTTASEDIQYIETTNEWSQWRDDLAESMFTEWQLRNA

TYK22655.1 retrotransposon protein [Cucumis melo var. makuwa]8.84e-3092.73Show/hide
Query:  MTYCDDVDDEDEEDSMYATTTASEDIQYIETTNEWSQWRDDLAESMFTEWQLRNA
        MTYCDDVDD DEEDSMYATTTASEDIQYIETTNEWSQWRD+L ESMFT+WQLRNA
Subjt:  MTYCDDVDDEDEEDSMYATTTASEDIQYIETTNEWSQWRDDLAESMFTEWQLRNA

TrEMBL top hitse value%identityAlignment
A0A5A7SMB5 Retrotransposon protein1.4e-2094.55Show/hide
Query:  MTYCDDVDDEDEEDSMYATTTASEDIQYIETTNEWSQWRDDLAESMFTEWQLRNA
        MTYCDDVDDEDE DS YATTTASEDIQYIETTNEWSQW DDLAESMFTEWQLRNA
Subjt:  MTYCDDVDDEDEEDSMYATTTASEDIQYIETTNEWSQWRDDLAESMFTEWQLRNA

A0A5A7TQ24 Retrotransposon protein1.4e-2094.55Show/hide
Query:  MTYCDDVDDEDEEDSMYATTTASEDIQYIETTNEWSQWRDDLAESMFTEWQLRNA
        MTYCDDVDDEDE DSMY TTTASEDIQYIETTNEWSQWRDDLAESMFT WQLRNA
Subjt:  MTYCDDVDDEDEEDSMYATTTASEDIQYIETTNEWSQWRDDLAESMFTEWQLRNA

A0A5A7UG16 Retrotransposon protein1.1e-2094.55Show/hide
Query:  MTYCDDVDDEDEEDSMYATTTASEDIQYIETTNEWSQWRDDLAESMFTEWQLRNA
        MTYCDDV+DEDE DS YATTTASEDIQYIETTNEWSQWRDDLAESMFTEWQLRNA
Subjt:  MTYCDDVDDEDEEDSMYATTTASEDIQYIETTNEWSQWRDDLAESMFTEWQLRNA

A0A5A7V4Q8 Retrotransposon protein4.9e-2194.55Show/hide
Query:  MTYCDDVDDEDEEDSMYATTTASEDIQYIETTNEWSQWRDDLAESMFTEWQLRNA
        MTYCDD+DDEDE DS YATTTASEDIQYIETTNEWSQWRDDLAESMFTEWQLRNA
Subjt:  MTYCDDVDDEDEEDSMYATTTASEDIQYIETTNEWSQWRDDLAESMFTEWQLRNA

A0A5D3DGG5 Retrotransposon protein1.4e-2092.73Show/hide
Query:  MTYCDDVDDEDEEDSMYATTTASEDIQYIETTNEWSQWRDDLAESMFTEWQLRNA
        MTYCDDVDD DEEDSMYATTTASEDIQYIETTNEWSQWRD+L ESMFT+WQLRNA
Subjt:  MTYCDDVDDEDEEDSMYATTTASEDIQYIETTNEWSQWRDDLAESMFTEWQLRNA

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGACATATTGCGACGACGTTGACGACGAGGACGAGGAGGACTCCATGTACGCGACGACCACCGCTTCAGAAGACATTCAGTACATTGAGACAACAAACGAGTGGTCTCA
GTGGCGCGACGACCTAGCCGAATCGATGTTCACCGAATGGCAGTTGCGTAACGCTTAG
mRNA sequenceShow/hide mRNA sequence
ATGACATATTGCGACGACGTTGACGACGAGGACGAGGAGGACTCCATGTACGCGACGACCACCGCTTCAGAAGACATTCAGTACATTGAGACAACAAACGAGTGGTCTCA
GTGGCGCGACGACCTAGCCGAATCGATGTTCACCGAATGGCAGTTGCGTAACGCTTAG
Protein sequenceShow/hide protein sequence
MTYCDDVDDEDEEDSMYATTTASEDIQYIETTNEWSQWRDDLAESMFTEWQLRNA