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IVF0018532 (gene) of Melon (IVF77) v1 genome

Gene IDIVF0018532
OrganismCucumis melo ssp. agrestis cv. IVF77 (Melon (IVF77) v1)
DescriptionLysM domain-containing protein
Genome locationtig00002012:303..1258
RNA-Seq ExpressionIVF0018532
SyntenyIVF0018532
Gene Ontology termsGO:0006468 - protein phosphorylation (biological process)
GO:0016021 - integral component of membrane (cellular component)
GO:0004672 - protein kinase activity (molecular function)
GO:0005524 - ATP binding (molecular function)
InterPro domainsIPR018392 - LysM domain
IPR036779 - LysM domain superfamily


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAG6576752.1 hypothetical protein SDJN03_24326, partial [Cucurbita argyrosperma subsp. sororia]6.68e-5483.81Show/hide
Query:  SSRPLIDVVSWYCAVGLLGLILIGSIRETSSSSG---DQGRSLRGNLVTWRPCDEIYVVGEGETLHTISDKCGDPFIVERNPHIHDPDDVFPGLVIKIIA
        SSR LIDVVSWYCA+ LLGLILIGSIRETSSSS    D G+ LRGNL+T R CDEIYVVGEGETLHTISDKCGDP+IVERNPHIHDPDDVFPGLVIKII+
Subjt:  SSRPLIDVVSWYCAVGLLGLILIGSIRETSSSSG---DQGRSLRGNLVTWRPCDEIYVVGEGETLHTISDKCGDPFIVERNPHIHDPDDVFPGLVIKIIA

Query:  SSTHN
        S  HN
Subjt:  SSTHN

KGN57357.2 hypothetical protein Csa_009741 [Cucumis sativus]7.98e-7693.55Show/hide
Query:  MPGVSIPRSRRPQYSSSSRPLIDVVSWYCAVGLLGLILIGSIRETSSSSGDQGRSLRGNLVTWRPCDEIYVVGEGETLHTISDKCGDPFIVERNPHIHDP
        MPGVS+PRSRRPQ  SSSRPLIDVVSWYCAVGLLGLILIGSIRETSSS GD GR LRGNLVTWRPCDEIYVVGEGETLHTISDKCGDP+IVERNPHIHDP
Subjt:  MPGVSIPRSRRPQYSSSSRPLIDVVSWYCAVGLLGLILIGSIRETSSSSGDQGRSLRGNLVTWRPCDEIYVVGEGETLHTISDKCGDPFIVERNPHIHDP

Query:  DDVFPGLVIKIIASSTHNNLPTSD
        DDVFPGLVIKIIASSTH NLPTSD
Subjt:  DDVFPGLVIKIIASSTHNNLPTSD

XP_004150301.1 uncharacterized protein LOC101210054 [Cucumis sativus]6.55e-7693.55Show/hide
Query:  MPGVSIPRSRRPQYSSSSRPLIDVVSWYCAVGLLGLILIGSIRETSSSSGDQGRSLRGNLVTWRPCDEIYVVGEGETLHTISDKCGDPFIVERNPHIHDP
        MPGVS+PRSRRPQ  SSSRPLIDVVSWYCAVGLLGLILIGSIRETSSS GD GR LRGNLVTWRPCDEIYVVGEGETLHTISDKCGDP+IVERNPHIHDP
Subjt:  MPGVSIPRSRRPQYSSSSRPLIDVVSWYCAVGLLGLILIGSIRETSSSSGDQGRSLRGNLVTWRPCDEIYVVGEGETLHTISDKCGDPFIVERNPHIHDP

Query:  DDVFPGLVIKIIASSTHNNLPTSD
        DDVFPGLVIKIIASSTH NLPTSD
Subjt:  DDVFPGLVIKIIASSTHNNLPTSD

XP_008439155.1 PREDICTED: uncharacterized protein LOC103484036 [Cucumis melo]1.90e-87100Show/hide
Query:  MPGVSIPRSRRPQYSSSSRPLIDVVSWYCAVGLLGLILIGSIRETSSSSGDQGRSLRGNLVTWRPCDEIYVVGEGETLHTISDKCGDPFIVERNPHIHDP
        MPGVSIPRSRRPQYSSSSRPLIDVVSWYCAVGLLGLILIGSIRETSSSSGDQGRSLRGNLVTWRPCDEIYVVGEGETLHTISDKCGDPFIVERNPHIHDP
Subjt:  MPGVSIPRSRRPQYSSSSRPLIDVVSWYCAVGLLGLILIGSIRETSSSSGDQGRSLRGNLVTWRPCDEIYVVGEGETLHTISDKCGDPFIVERNPHIHDP

Query:  DDVFPGLVIKIIASSTHNNLPTSD
        DDVFPGLVIKIIASSTHNNLPTSD
Subjt:  DDVFPGLVIKIIASSTHNNLPTSD

XP_022157015.1 uncharacterized protein LOC111023841 [Momordica charantia]4.17e-5576.52Show/hide
Query:  PRSRRPQYSSSSRPLIDVVSWYCAVGLLGLILIGSIRETSSSSG--DQGRSLRGNLVTWRPCDEIYVVGEGETLHTISDKCGDPFIVERNPHIHDPDDVF
        P  R    + SSRP  DVVSWYCAVG+L LILIGSIRE++ S+G  D GR  RGNLV  RPCDEIYVVGEGETLHTISDKCGDPFIVERNPHIHDPDDVF
Subjt:  PRSRRPQYSSSSRPLIDVVSWYCAVGLLGLILIGSIRETSSSSG--DQGRSLRGNLVTWRPCDEIYVVGEGETLHTISDKCGDPFIVERNPHIHDPDDVF

Query:  PGLVIKIIASSTHNN
        PGLVIKII+SS  +N
Subjt:  PGLVIKIIASSTHNN

TrEMBL top hitse value%identityAlignment
A0A0A0L5R9 LysM domain-containing protein2.5e-5793.55Show/hide
Query:  MPGVSIPRSRRPQYSSSSRPLIDVVSWYCAVGLLGLILIGSIRETSSSSGDQGRSLRGNLVTWRPCDEIYVVGEGETLHTISDKCGDPFIVERNPHIHDP
        MPGVS+PRSRRPQ  SSSRPLIDVVSWYCAVGLLGLILIGSIRET SSSGD GR LRGNLVTWRPCDEIYVVGEGETLHTISDKCGDP+IVERNPHIHDP
Subjt:  MPGVSIPRSRRPQYSSSSRPLIDVVSWYCAVGLLGLILIGSIRETSSSSGDQGRSLRGNLVTWRPCDEIYVVGEGETLHTISDKCGDPFIVERNPHIHDP

Query:  DDVFPGLVIKIIASSTHNNLPTSD
        DDVFPGLVIKIIASSTH NLPTSD
Subjt:  DDVFPGLVIKIIASSTHNNLPTSD

A0A1S3AXP2 uncharacterized protein LOC1034840363.0e-66100Show/hide
Query:  MPGVSIPRSRRPQYSSSSRPLIDVVSWYCAVGLLGLILIGSIRETSSSSGDQGRSLRGNLVTWRPCDEIYVVGEGETLHTISDKCGDPFIVERNPHIHDP
        MPGVSIPRSRRPQYSSSSRPLIDVVSWYCAVGLLGLILIGSIRETSSSSGDQGRSLRGNLVTWRPCDEIYVVGEGETLHTISDKCGDPFIVERNPHIHDP
Subjt:  MPGVSIPRSRRPQYSSSSRPLIDVVSWYCAVGLLGLILIGSIRETSSSSGDQGRSLRGNLVTWRPCDEIYVVGEGETLHTISDKCGDPFIVERNPHIHDP

Query:  DDVFPGLVIKIIASSTHNNLPTSD
        DDVFPGLVIKIIASSTHNNLPTSD
Subjt:  DDVFPGLVIKIIASSTHNNLPTSD

A0A5A7VAP9 Peptidoglycan-binding LysM domain-containing protein3.0e-66100Show/hide
Query:  MPGVSIPRSRRPQYSSSSRPLIDVVSWYCAVGLLGLILIGSIRETSSSSGDQGRSLRGNLVTWRPCDEIYVVGEGETLHTISDKCGDPFIVERNPHIHDP
        MPGVSIPRSRRPQYSSSSRPLIDVVSWYCAVGLLGLILIGSIRETSSSSGDQGRSLRGNLVTWRPCDEIYVVGEGETLHTISDKCGDPFIVERNPHIHDP
Subjt:  MPGVSIPRSRRPQYSSSSRPLIDVVSWYCAVGLLGLILIGSIRETSSSSGDQGRSLRGNLVTWRPCDEIYVVGEGETLHTISDKCGDPFIVERNPHIHDP

Query:  DDVFPGLVIKIIASSTHNNLPTSD
        DDVFPGLVIKIIASSTHNNLPTSD
Subjt:  DDVFPGLVIKIIASSTHNNLPTSD

A0A6J1DRZ3 uncharacterized protein LOC1110238411.9e-4176.52Show/hide
Query:  PRSRRPQYSSSSRPLIDVVSWYCAVGLLGLILIGSIRETSSSSG--DQGRSLRGNLVTWRPCDEIYVVGEGETLHTISDKCGDPFIVERNPHIHDPDDVF
        P  R    + SSRP  DVVSWYCAVG+L LILIGSIRE++ S+G  D GR  RGNLV  RPCDEIYVVGEGETLHTISDKCGDPFIVERNPHIHDPDDVF
Subjt:  PRSRRPQYSSSSRPLIDVVSWYCAVGLLGLILIGSIRETSSSSG--DQGRSLRGNLVTWRPCDEIYVVGEGETLHTISDKCGDPFIVERNPHIHDPDDVF

Query:  PGLVIKIIASSTHNN
        PGLVIKII+SS  +N
Subjt:  PGLVIKIIASSTHNN

A0A6J1J769 uncharacterized protein LOC1114831841.4e-3975Show/hide
Query:  MPGVSIPRSRRPQYSSSSRPLIDVVSWYCAVGLLGLILIGSIRETSSSSG--DQGRSLRGNLVTWRPCDEIYVVGEGETLHTISDKCGDPFIVERNPHIH
        MP +   R+  P    SSR LIDVVSWYCAV +LGLILIGSIRETSSS+   D  + LRGNL+T R CDEIYVVGEGETLHTISDKCGDP+IVERNPHIH
Subjt:  MPGVSIPRSRRPQYSSSSRPLIDVVSWYCAVGLLGLILIGSIRETSSSSG--DQGRSLRGNLVTWRPCDEIYVVGEGETLHTISDKCGDPFIVERNPHIH

Query:  DPDDVFPGLVIKIIASSTHN
        DPDDVFPGLVIKII  S+HN
Subjt:  DPDDVFPGLVIKIIASSTHN

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
AT3G52790.1 peptidoglycan-binding LysM domain-containing protein1.7e-2148.57Show/hide
Query:  SSSRPLIDVVSWYCAVGLLGLILIGSIRETSSSSGDQGRSLRGNLVTW-----RP-CDEIYVVGEGETLHTISDKCGDPFIVERNPHIHDPDDVFPGLVI
        SSS  + + +SWYCAV    ++L+ S +     S +     + +++       RP CDEIY V EGETL TIS+KCGDP+IVE NPHIHD DD+FPGL+I
Subjt:  SSSRPLIDVVSWYCAVGLLGLILIGSIRETSSSSGDQGRSLRGNLVTW-----RP-CDEIYVVGEGETLHTISDKCGDPFIVERNPHIHDPDDVFPGLVI

Query:  KIIAS
        +I  S
Subjt:  KIIAS

AT4G25433.1 peptidoglycan-binding LysM domain-containing protein1.2e-2757.94Show/hide
Query:  DVVSWYCAVGLLGLILIGSIRETSSSSGDQGRSLRG-NLVTW-------RPCDEIYVVGEGETLHTISDKCGDPFIVERNPHIHDPDDVFPGLVIKIIAS
        + V+ YC V LL L L GS++  +S+ G  G   RG N   W       RPC+E+YVVGEG+TLH+IS+KCGDPFIVERNPHIHDPDDVFPGL+IK+   
Subjt:  DVVSWYCAVGLLGLILIGSIRETSSSSGDQGRSLRG-NLVTW-------RPCDEIYVVGEGETLHTISDKCGDPFIVERNPHIHDPDDVFPGLVIKIIAS

Query:  STHNNLP
          H NLP
Subjt:  STHNNLP

AT5G62150.1 peptidoglycan-binding LysM domain-containing protein9.8e-3066.29Show/hide
Query:  DVVSWYCAVGLLGLILIGSIRETSSSSGDQGRSLRGNLVTWRPCDEIYVVGEGETLHTISDKCGDPFIVERNPHIHDPDDVFPGLVIKI
        D+ +W  AV LL LIL+ S+RE ++S+     S+RG+  + +PC+EIY+VGEGETLHTI DKCGDPFIVERNPHIHDPDDVFPGLV+KI
Subjt:  DVVSWYCAVGLLGLILIGSIRETSSSSGDQGRSLRGNLVTWRPCDEIYVVGEGETLHTISDKCGDPFIVERNPHIHDPDDVFPGLVIKI


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGCCCGGCGTCTCTATTCCCAGAAGTAGGCGGCCACAGTACTCGTCGTCTTCACGACCCCTAATCGACGTCGTCTCATGGTACTGCGCGGTGGGGCTATTGGGCCTTAT
CTTGATAGGGTCCATCAGAGAAACTTCCTCCTCCTCCGGTGATCAGGGCAGGTCGTTGAGAGGGAACTTGGTGACTTGGCGTCCCTGCGATGAGATATATGTGGTCGGAG
AAGGAGAAACGCTTCATACGATTAGCGATAAGTGCGGTGACCCGTTTATCGTGGAGCGGAACCCCCATATCCATGACCCGGATGACGTTTTCCCCGGTTTGGTTATTAAA
ATTATTGCCTCCTCCACCCACAATAACCTTCCAACTTCGGATTGA
mRNA sequenceShow/hide mRNA sequence
GTAATTAGAAAGAGATGGGGCCGAGGGTGATTTTATATTAATAGCTTTTTGGCGTTGGGGTCGGGAGAGAAGTTGAGACGACTTCAAAAGTTGAAACCAATCCAAAATGT
ATAACCCCAACCCCAAGTCCTGAATCCGTAAGCTTAACGTCCCAAACGTCAAACCTCAAATTCCTCCCTCTTCTTAATTAACCACTTTATAAATACCCAATATTTTTTAA
TTTCCCATCTCCCCAACTCTCTATTTCATTTTATACTCCAAAATTCAGTTCACTTCCGATCCACCACCAGCATGCCCGGCGTCTCTATTCCCAGAAGTAGGCGGCCACAG
TACTCGTCGTCTTCACGACCCCTAATCGACGTCGTCTCATGGTACTGCGCGGTGGGGCTATTGGGCCTTATCTTGATAGGGTCCATCAGAGAAACTTCCTCCTCCTCCGG
TGATCAGGGCAGGTCGTTGAGAGGGAACTTGGTGACTTGGCGTCCCTGCGATGAGATATATGTGGTCGGAGAAGGAGAAACGCTTCATACGATTAGCGATAAGTGCGGTG
ACCCGTTTATCGTGGAGCGGAACCCCCATATCCATGACCCGGATGACGTTTTCCCCGGTTTGGTTATTAAAATTATTGCCTCCTCCACCCACAATAACCTTCCAACTTCG
GATTGATCCATACCTTCTTCAATTCTATTTTATCCTCTTTTTTTTTTCTTTCGACTCCCTAAGGCCAGATTTTACCCACCCCAAATAAAAATTTAAAAAAACAAAAAGCA
TAAACTTTAGGTTTTTTTAGAACTATATATGATTTCCCAGATCGATAGATGTGTATATGATGTCGAGGTTTGTGGATTTTTCTTTTTTTAAGGATATAGAGGTAAAATAT
ATAGCTCATCTTCTTCTCCTGTATGTATAAAATATCATAATTAATACATATATCTAAGTAAAGTTGTTTTTTCTCC
Protein sequenceShow/hide protein sequence
MPGVSIPRSRRPQYSSSSRPLIDVVSWYCAVGLLGLILIGSIRETSSSSGDQGRSLRGNLVTWRPCDEIYVVGEGETLHTISDKCGDPFIVERNPHIHDPDDVFPGLVIK
IIASSTHNNLPTSD