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IVF0018540 (gene) of Melon (IVF77) v1 genome

Gene IDIVF0018540
OrganismCucumis melo ssp. agrestis cv. IVF77 (Melon (IVF77) v1)
DescriptionReverse transcriptase
Genome locationchr01:17908927..17909430
RNA-Seq ExpressionIVF0018540
SyntenyIVF0018540
Gene Ontology termsGO:0006807 - nitrogen compound metabolic process (biological process)
GO:0043170 - macromolecule metabolic process (biological process)
GO:0044238 - primary metabolic process (biological process)
GO:0016787 - hydrolase activity (molecular function)
InterPro domainsIPR043502 - DNA/RNA polymerase superfamily


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0031989.1 putative Retrotransposon protein [Cucumis melo var. makuwa]4.63e-4551.81Show/hide
Query:  MEFLPKYHAILDCFNKEVVLRNPGKFEVNFEGDKEVKFERIISVLHARKRVKKGHTTYLEHLVDTRVPKDNPSRMPIVCEYLD--------------IEF
        + FL KYHAI D  NKEVVLR+P K E+ FE DK V  ERII VL ARK +K  H +YL H+++T  P+++PS++PIVCEY+D              I+F
Subjt:  MEFLPKYHAILDCFNKEVVLRNPGKFEVNFEGDKEVKFERIISVLHARKRVKKGHTTYLEHLVDTRVPKDNPSRMPIVCEYLD--------------IEF

Query:  TIEVVSRTTPISQTSYRMVP----------KEFIEKGYIQPSTVPWGGPVLFVKNKDGYMRLCINY
        TIE+V  TTPISQT YRM            KE IEK YIQP T PW  P+LF + +DG +RLCI+Y
Subjt:  TIEVVSRTTPISQTSYRMVP----------KEFIEKGYIQPSTVPWGGPVLFVKNKDGYMRLCINY

KAA0035981.1 DNA/RNA polymerases superfamily protein [Cucumis melo var. makuwa]1.13e-4259.2Show/hide
Query:  MEFLPKYHAILDCFNKEVVLRNPGKFEVNFEGDKEVKFERIISVLHARKRVKKGHTTYLEHLVDTRVPKDNPSRMPIVCEYLD--------------IEF
        M+FL KYHAILDC +KEVVLR+ GKFE+ F+GDK+V F RIIS+L ARK +KKGH  YL  +VDT  PKDNPS++PIVC+Y+D              IEF
Subjt:  MEFLPKYHAILDCFNKEVVLRNPGKFEVNFEGDKEVKFERIISVLHARKRVKKGHTTYLEHLVDTRVPKDNPSRMPIVCEYLD--------------IEF

Query:  TIEVVSRTTPISQTSYRMVPKEFIE
        T+EVV  TTPISQ+ YRM P +  E
Subjt:  TIEVVSRTTPISQTSYRMVPKEFIE

KAA0036513.1 DNA/RNA polymerases superfamily protein [Cucumis melo var. makuwa]1.01e-5198.81Show/hide
Query:  MEFLPKYHAILDCFNKEVVLRNPGKFEVNFEGDKEVKFERIISVLHARKRVKKGHTTYLEHLVDTRVPKDNPSRMPIVCEYLDI
        MEFLPKYHAILDCFNKEVVLRNPGKFEVNFEGDKEVKFERIISVLHARKRVKKGHTTYLEHLVDTRVPKDNPSRMPIVCEYLD+
Subjt:  MEFLPKYHAILDCFNKEVVLRNPGKFEVNFEGDKEVKFERIISVLHARKRVKKGHTTYLEHLVDTRVPKDNPSRMPIVCEYLDI

KAA0040571.1 uncharacterized protein E6C27_scaffold262G001410 [Cucumis melo var. makuwa]2.97e-4149.4Show/hide
Query:  MEFLPKYHAILDCFNKEVVLRNPGKFEVNFEGDKEVKFERIISVLHARKRVKKGHTTYLEHLVDTRVPKDNPSRMPIVCEYLD--------------IEF
        M FL KYHA+LDCFNKE                             ARK +KKGHT YLEH+VDTR  +D+PS++PIVCEYLD              IEF
Subjt:  MEFLPKYHAILDCFNKEVVLRNPGKFEVNFEGDKEVKFERIISVLHARKRVKKGHTTYLEHLVDTRVPKDNPSRMPIVCEYLD--------------IEF

Query:  TIEVVSRTTPISQTSYRMVP----------KEFIEKGYIQPSTVPWGGPVLFVKNKDGYMRLCINY
         I+V S +T ISQ  Y M P          +E IEKGYI+P+T PWG PVLFVKNKDG MRLCI+Y
Subjt:  TIEVVSRTTPISQTSYRMVP----------KEFIEKGYIQPSTVPWGGPVLFVKNKDGYMRLCINY

KAA0041141.1 DNA/RNA polymerases superfamily protein [Cucumis melo var. makuwa]1.88e-4149.4Show/hide
Query:  MEFLPKYHAILDCFNKEVVLRNPGKFEVNFEGDKEVKFERIISVLHARKRVKKGHTTYLEHLVDTRVPKDNPSRMPIVCEYLD--------------IEF
        M FL KYHAILDC NKEVVLR  GKFEV +                        HT YL H++DT++ K +   +PIV EYLD              IE 
Subjt:  MEFLPKYHAILDCFNKEVVLRNPGKFEVNFEGDKEVKFERIISVLHARKRVKKGHTTYLEHLVDTRVPKDNPSRMPIVCEYLD--------------IEF

Query:  TIEVVSRTTPISQTSYRMVP----------KEFIEKGYIQPSTVPWGGPVLFVKNKDGYMRLCINY
        TI+V+ RTTPISQT YRM P          +E +EKGYIQPST+PWG P+LFVK KDG MRLCI+Y
Subjt:  TIEVVSRTTPISQTSYRMVP----------KEFIEKGYIQPSTVPWGGPVLFVKNKDGYMRLCINY

TrEMBL top hitse value%identityAlignment
A0A5A7T0V0 DNA/RNA polymerases superfamily protein2.9e-4198.81Show/hide
Query:  MEFLPKYHAILDCFNKEVVLRNPGKFEVNFEGDKEVKFERIISVLHARKRVKKGHTTYLEHLVDTRVPKDNPSRMPIVCEYLDI
        MEFLPKYHAILDCFNKEVVLRNPGKFEVNFEGDKEVKFERIISVLHARKRVKKGHTTYLEHLVDTRVPKDNPSRMPIVCEYLD+
Subjt:  MEFLPKYHAILDCFNKEVVLRNPGKFEVNFEGDKEVKFERIISVLHARKRVKKGHTTYLEHLVDTRVPKDNPSRMPIVCEYLDI

A0A5A7THJ0 DNA/RNA polymerases superfamily protein2.5e-3249.4Show/hide
Query:  MEFLPKYHAILDCFNKEVVLRNPGKFEVNFEGDKEVKFERIISVLHARKRVKKGHTTYLEHLVDTRVPKDNPSRMPIVCEYLD--------------IEF
        M FL KYHAILDC NKEVVLR  GKFEV +                        HT YL H++DT++ K +   +PIV EYLD              IE 
Subjt:  MEFLPKYHAILDCFNKEVVLRNPGKFEVNFEGDKEVKFERIISVLHARKRVKKGHTTYLEHLVDTRVPKDNPSRMPIVCEYLD--------------IEF

Query:  TIEVVSRTTPISQTSYRMVP----------KEFIEKGYIQPSTVPWGGPVLFVKNKDGYMRLCINY
        TI+V+ RTTPISQT YRM P          +E +EKGYIQPST+PWG P+LFVK KDG MRLCI+Y
Subjt:  TIEVVSRTTPISQTSYRMVP----------KEFIEKGYIQPSTVPWGGPVLFVKNKDGYMRLCINY

A0A5D3C2T7 Uncharacterized protein3.2e-3249.4Show/hide
Query:  MEFLPKYHAILDCFNKEVVLRNPGKFEVNFEGDKEVKFERIISVLHARKRVKKGHTTYLEHLVDTRVPKDNPSRMPIVCEYLD--------------IEF
        M FL KYHA+LDCFNKE                             ARK +KKGHT YLEH+VDTR  +D+PS++PIVCEYLD              IEF
Subjt:  MEFLPKYHAILDCFNKEVVLRNPGKFEVNFEGDKEVKFERIISVLHARKRVKKGHTTYLEHLVDTRVPKDNPSRMPIVCEYLD--------------IEF

Query:  TIEVVSRTTPISQTSYRMVP----------KEFIEKGYIQPSTVPWGGPVLFVKNKDGYMRLCINY
         I+V S +T ISQ  Y M P          +E IEKGYI+P+T PWG PVLFVKNKDG MRLCI+Y
Subjt:  TIEVVSRTTPISQTSYRMVP----------KEFIEKGYIQPSTVPWGGPVLFVKNKDGYMRLCINY

A0A5D3D2P1 Putative Retrotransposon protein3.3e-3751.81Show/hide
Query:  MEFLPKYHAILDCFNKEVVLRNPGKFEVNFEGDKEVKFERIISVLHARKRVKKGHTTYLEHLVDTRVPKDNPSRMPIVCEYLD--------------IEF
        + FL KYHAI D  NKEVVLR+P K E+ FE DK V  ERII VL ARK +K  H +YL H+++T  P+++PS++PIVCEY+D              I+F
Subjt:  MEFLPKYHAILDCFNKEVVLRNPGKFEVNFEGDKEVKFERIISVLHARKRVKKGHTTYLEHLVDTRVPKDNPSRMPIVCEYLD--------------IEF

Query:  TIEVVSRTTPISQTSYRMV----------PKEFIEKGYIQPSTVPWGGPVLFVKNKDGYMRLCINY
        TIE+V  TTPISQT YRM            KE IEK YIQP T PW  P+LF + +DG +RLCI+Y
Subjt:  TIEVVSRTTPISQTSYRMV----------PKEFIEKGYIQPSTVPWGGPVLFVKNKDGYMRLCINY

A0A5D3E3F7 DNA/RNA polymerases superfamily protein1.1e-3259.2Show/hide
Query:  MEFLPKYHAILDCFNKEVVLRNPGKFEVNFEGDKEVKFERIISVLHARKRVKKGHTTYLEHLVDTRVPKDNPSRMPIVCEYLD--------------IEF
        M+FL KYHAILDC +KEVVLR+ GKFE+ F+GDK+V F RIIS+L ARK +KKGH  YL  +VDT  PKDNPS++PIVC+Y+D              IEF
Subjt:  MEFLPKYHAILDCFNKEVVLRNPGKFEVNFEGDKEVKFERIISVLHARKRVKKGHTTYLEHLVDTRVPKDNPSRMPIVCEYLD--------------IEF

Query:  TIEVVSRTTPISQTSYRMVPKEFIE
        T+EVV  TTPISQ+ YRM P +  E
Subjt:  TIEVVSRTTPISQTSYRMVPKEFIE

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGAGTTTCTCCCCAAGTACCATGCGATATTGGACTGCTTTAATAAGGAGGTAGTATTGAGAAACCCTGGAAAATTTGAGGTTAACTTTGAAGGTGATAAGGAGGTTAA
ATTTGAAAGAATAATATCCGTACTACATGCGAGGAAACGGGTAAAAAAGGGGCATACCACCTATTTGGAACATTTGGTAGATACACGGGTACCAAAGGATAATCCCAGCA
GGATGCCTATAGTTTGCGAATACTTGGATATTGAGTTTACTATTGAAGTTGTATCTAGGACTACACCGATTTCTCAAACTTCTTATCGCATGGTACCAAAGGAATTTATA
GAAAAAGGTTACATCCAGCCTAGTACCGTACCATGGGGAGGCCCTGTCTTATTTGTAAAGAACAAAGATGGATACATGCGACTGTGCATCAACTATCACTAA
mRNA sequenceShow/hide mRNA sequence
ATGGAGTTTCTCCCCAAGTACCATGCGATATTGGACTGCTTTAATAAGGAGGTAGTATTGAGAAACCCTGGAAAATTTGAGGTTAACTTTGAAGGTGATAAGGAGGTTAA
ATTTGAAAGAATAATATCCGTACTACATGCGAGGAAACGGGTAAAAAAGGGGCATACCACCTATTTGGAACATTTGGTAGATACACGGGTACCAAAGGATAATCCCAGCA
GGATGCCTATAGTTTGCGAATACTTGGATATTGAGTTTACTATTGAAGTTGTATCTAGGACTACACCGATTTCTCAAACTTCTTATCGCATGGTACCAAAGGAATTTATA
GAAAAAGGTTACATCCAGCCTAGTACCGTACCATGGGGAGGCCCTGTCTTATTTGTAAAGAACAAAGATGGATACATGCGACTGTGCATCAACTATCACTAA
Protein sequenceShow/hide protein sequence
MEFLPKYHAILDCFNKEVVLRNPGKFEVNFEGDKEVKFERIISVLHARKRVKKGHTTYLEHLVDTRVPKDNPSRMPIVCEYLDIEFTIEVVSRTTPISQTSYRMVPKEFI
EKGYIQPSTVPWGGPVLFVKNKDGYMRLCINYH