CuGenDBv2

Gene ID	IVF0018559
Organism	Cucumis melo ssp. agrestis cv. IVF77 (Melon (IVF77) v1)
Description	60S Ribosomal protein
Genome location	chr11:18945833..18947721
RNA-Seq Expression	IVF0018559
Synteny	IVF0018559
Gene Ontology terms	NA
InterPro domains	IPR040344 - Uncharacterized protein At3g17950-like

Homology

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GenBank top hits

e value

%identity

Alignment

TYK24009.1 uncharacterized protein E5676_scaffold250G001010 [Cucumis melo var. makuwa]

8.94e-117

85.92

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Query:  MAQQGDGWPLGLQPLNVRVGVPGNRDYLGSVSFNTLMTASPISFSDSSSDLDTESTGSFFHDKSITLGSLIGVSNILELSRRSIRGRRTESTKDKRSNAK
        MAQQGDGWPLGLQPLNVRVGVPGNRDYLGSVSFNTLMTASPISFSDSSSDLDTESTGSFFHDKSITLGSLIGVSNILELSR                   
Subjt:  MAQQGDGWPLGLQPLNVRVGVPGNRDYLGSVSFNTLMTASPISFSDSSSDLDTESTGSFFHDKSITLGSLIGVSNILELSRRSIRGRRTESTKDKRSNAK

Query:  SRTWFFSLCSRESTDADSIESGPSLGHFLAEERRAADENRRNNQSEIMYGADELELAQFGPEPNSLFINGCVAPPQSSIGSNAENGGTEHTNDNRVALIC
                  RESTDADSIESGPSLGHFLAEERRAADENRRNNQSEIMYGADELELAQFGPEPNSLFINGCVAPPQSSIGSNAENGGTEHTNDNRVALIC
Subjt:  SRTWFFSLCSRESTDADSIESGPSLGHFLAEERRAADENRRNNQSEIMYGADELELAQFGPEPNSLFINGCVAPPQSSIGSNAENGGTEHTNDNRVALIC

Query:  SCICGH
        SCICGH
Subjt:  SCICGH

XP_004143109.1 uncharacterized protein At3g17950 isoform X1 [Cucumis sativus]

2.39e-139

97.57

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Query:  MAQQGDGWPLGLQPLNVRVGVPGNRDYLGSVSFNTLMTASPISFSDSSSDLDTESTGSFFHDKSITLGSLIGVSNILELSRRSIRGRRTESTKDKRSNAK
        MAQQGDGWPLGLQPLNVRVGVPGNRDYLGSVSFNTLMTASPISFSDSSSDLDTESTGSFFHDKSITLGSLIGVSNILELSRRSIRGRRTESTKDKRSN K
Subjt:  MAQQGDGWPLGLQPLNVRVGVPGNRDYLGSVSFNTLMTASPISFSDSSSDLDTESTGSFFHDKSITLGSLIGVSNILELSRRSIRGRRTESTKDKRSNAK

Query:  SRTWFFSLCSRESTDADSIESGPSLGHFLAEERRAADENRRNNQSEIMYGADELELAQFGPEPNSLFINGCVAPPQSSIGSNAENGGTEHTNDNRVALIC
        SRTWFFSLCSRESTDADSIESGPSLGHFLAEERRAADENRRNNQSEIMYGADELELAQFGPEPNSLFINGCVAPPQ SIGS  ENGGTE TNDNRVALIC
Subjt:  SRTWFFSLCSRESTDADSIESGPSLGHFLAEERRAADENRRNNQSEIMYGADELELAQFGPEPNSLFINGCVAPPQSSIGSNAENGGTEHTNDNRVALIC

Query:  SCICGH
        SCICGH
Subjt:  SCICGH

XP_008464139.1 PREDICTED: uncharacterized protein At3g17950-like [Cucumis melo]

9.05e-144

100

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Query:  MAQQGDGWPLGLQPLNVRVGVPGNRDYLGSVSFNTLMTASPISFSDSSSDLDTESTGSFFHDKSITLGSLIGVSNILELSRRSIRGRRTESTKDKRSNAK
        MAQQGDGWPLGLQPLNVRVGVPGNRDYLGSVSFNTLMTASPISFSDSSSDLDTESTGSFFHDKSITLGSLIGVSNILELSRRSIRGRRTESTKDKRSNAK
Subjt:  MAQQGDGWPLGLQPLNVRVGVPGNRDYLGSVSFNTLMTASPISFSDSSSDLDTESTGSFFHDKSITLGSLIGVSNILELSRRSIRGRRTESTKDKRSNAK

Query:  SRTWFFSLCSRESTDADSIESGPSLGHFLAEERRAADENRRNNQSEIMYGADELELAQFGPEPNSLFINGCVAPPQSSIGSNAENGGTEHTNDNRVALIC
        SRTWFFSLCSRESTDADSIESGPSLGHFLAEERRAADENRRNNQSEIMYGADELELAQFGPEPNSLFINGCVAPPQSSIGSNAENGGTEHTNDNRVALIC
Subjt:  SRTWFFSLCSRESTDADSIESGPSLGHFLAEERRAADENRRNNQSEIMYGADELELAQFGPEPNSLFINGCVAPPQSSIGSNAENGGTEHTNDNRVALIC

Query:  SCICGH
        SCICGH
Subjt:  SCICGH

XP_038902040.1 uncharacterized protein At3g17950-like isoform X1 [Benincasa hispida]

1.14e-124

90.24

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Query:  GDGWPLGLQPLNVRVGVPGNRDYLGSVSFNTLMTASPISFSDSSSDLDTESTGSFFHDKSITLGSLIGVSNILELSRRSIRGRRTESTKDKRSNAKSRTW
        G+GWPLGLQPLNVRVGVPGNRDYLGSVSFNTLMTASPISFSDSSSDLDTESTGSFFHDKSITLGSLIGVSNILELSRRSIRGRRTE+TK+KRSN +SR W
Subjt:  GDGWPLGLQPLNVRVGVPGNRDYLGSVSFNTLMTASPISFSDSSSDLDTESTGSFFHDKSITLGSLIGVSNILELSRRSIRGRRTESTKDKRSNAKSRTW

Query:  FFSLCSRESTDADSIESGPSLGHFLAEERRAADENRRNNQSEIMYGADELELAQFGPEPNSLFINGCVAPPQSSIGSNAENG---GTEHTNDNRVALICS
        FFSLCSREST+ADS++SGPSLGHFLAEERRAADENRRN QS IMYG DELELAQ GPEPNSLFINGCVAPPQSSIGSNAENG   GTE  NDNR ALIC+
Subjt:  FFSLCSRESTDADSIESGPSLGHFLAEERRAADENRRNNQSEIMYGADELELAQFGPEPNSLFINGCVAPPQSSIGSNAENG---GTEHTNDNRVALICS

Query:  CICGH
        CICGH
Subjt:  CICGH

XP_038902041.1 uncharacterized protein At3g17950-like isoform X2 [Benincasa hispida]

1.40e-127

90.43

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Query:  MAQQGDGWPLGLQPLNVRVGVPGNRDYLGSVSFNTLMTASPISFSDSSSDLDTESTGSFFHDKSITLGSLIGVSNILELSRRSIRGRRTESTKDKRSNAK
        MAQQG+GWPLGLQPLNVRVGVPGNRDYLGSVSFNTLMTASPISFSDSSSDLDTESTGSFFHDKSITLGSLIGVSNILELSRRSIRGRRTE+TK+KRSN +
Subjt:  MAQQGDGWPLGLQPLNVRVGVPGNRDYLGSVSFNTLMTASPISFSDSSSDLDTESTGSFFHDKSITLGSLIGVSNILELSRRSIRGRRTESTKDKRSNAK

Query:  SRTWFFSLCSRESTDADSIESGPSLGHFLAEERRAADENRRNNQSEIMYGADELELAQFGPEPNSLFINGCVAPPQSSIGSNAENG---GTEHTNDNRVA
        SR WFFSLCSREST+ADS++SGPSLGHFLAEERRAADENRRN QS IMYG DELELAQ GPEPNSLFINGCVAPPQSSIGSNAENG   GTE  NDNR A
Subjt:  SRTWFFSLCSRESTDADSIESGPSLGHFLAEERRAADENRRNNQSEIMYGADELELAQFGPEPNSLFINGCVAPPQSSIGSNAENG---GTEHTNDNRVA

Query:  LICSCICGH
        LIC+CICGH
Subjt:  LICSCICGH

TrEMBL top hits

e value

%identity

Alignment

A0A0A0KCA6 Uncharacterized protein

1.5e-107

97.57

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Query:  MAQQGDGWPLGLQPLNVRVGVPGNRDYLGSVSFNTLMTASPISFSDSSSDLDTESTGSFFHDKSITLGSLIGVSNILELSRRSIRGRRTESTKDKRSNAK
        MAQQGDGWPLGLQPLNVRVGVPGNRDYLGSVSFNTLMTASPISFSDSSSDLDTESTGSFFHDKSITLGSLIGVSNILELSRRSIRGRRTESTKDKRSN K
Subjt:  MAQQGDGWPLGLQPLNVRVGVPGNRDYLGSVSFNTLMTASPISFSDSSSDLDTESTGSFFHDKSITLGSLIGVSNILELSRRSIRGRRTESTKDKRSNAK

Query:  SRTWFFSLCSRESTDADSIESGPSLGHFLAEERRAADENRRNNQSEIMYGADELELAQFGPEPNSLFINGCVAPPQSSIGSNAENGGTEHTNDNRVALIC
        SRTWFFSLCSRESTDADSIESGPSLGHFLAEERRAADENRRNNQSEIMYGADELELAQFGPEPNSLFINGCVAPPQ SIGS  ENGGTE TNDNRVALIC
Subjt:  SRTWFFSLCSRESTDADSIESGPSLGHFLAEERRAADENRRNNQSEIMYGADELELAQFGPEPNSLFINGCVAPPQSSIGSNAENGGTEHTNDNRVALIC

Query:  SCICGH
        SCICGH
Subjt:  SCICGH

A0A1S3CKU9 uncharacterized protein At3g17950-like

6.6e-111

100

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Query:  MAQQGDGWPLGLQPLNVRVGVPGNRDYLGSVSFNTLMTASPISFSDSSSDLDTESTGSFFHDKSITLGSLIGVSNILELSRRSIRGRRTESTKDKRSNAK
        MAQQGDGWPLGLQPLNVRVGVPGNRDYLGSVSFNTLMTASPISFSDSSSDLDTESTGSFFHDKSITLGSLIGVSNILELSRRSIRGRRTESTKDKRSNAK
Subjt:  MAQQGDGWPLGLQPLNVRVGVPGNRDYLGSVSFNTLMTASPISFSDSSSDLDTESTGSFFHDKSITLGSLIGVSNILELSRRSIRGRRTESTKDKRSNAK

Query:  SRTWFFSLCSRESTDADSIESGPSLGHFLAEERRAADENRRNNQSEIMYGADELELAQFGPEPNSLFINGCVAPPQSSIGSNAENGGTEHTNDNRVALIC
        SRTWFFSLCSRESTDADSIESGPSLGHFLAEERRAADENRRNNQSEIMYGADELELAQFGPEPNSLFINGCVAPPQSSIGSNAENGGTEHTNDNRVALIC
Subjt:  SRTWFFSLCSRESTDADSIESGPSLGHFLAEERRAADENRRNNQSEIMYGADELELAQFGPEPNSLFINGCVAPPQSSIGSNAENGGTEHTNDNRVALIC

Query:  SCICGH
        SCICGH
Subjt:  SCICGH

A0A5A7V897 Uncharacterized protein

6.6e-111

100

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Query:  MAQQGDGWPLGLQPLNVRVGVPGNRDYLGSVSFNTLMTASPISFSDSSSDLDTESTGSFFHDKSITLGSLIGVSNILELSRRSIRGRRTESTKDKRSNAK
        MAQQGDGWPLGLQPLNVRVGVPGNRDYLGSVSFNTLMTASPISFSDSSSDLDTESTGSFFHDKSITLGSLIGVSNILELSRRSIRGRRTESTKDKRSNAK
Subjt:  MAQQGDGWPLGLQPLNVRVGVPGNRDYLGSVSFNTLMTASPISFSDSSSDLDTESTGSFFHDKSITLGSLIGVSNILELSRRSIRGRRTESTKDKRSNAK

Query:  SRTWFFSLCSRESTDADSIESGPSLGHFLAEERRAADENRRNNQSEIMYGADELELAQFGPEPNSLFINGCVAPPQSSIGSNAENGGTEHTNDNRVALIC
        SRTWFFSLCSRESTDADSIESGPSLGHFLAEERRAADENRRNNQSEIMYGADELELAQFGPEPNSLFINGCVAPPQSSIGSNAENGGTEHTNDNRVALIC
Subjt:  SRTWFFSLCSRESTDADSIESGPSLGHFLAEERRAADENRRNNQSEIMYGADELELAQFGPEPNSLFINGCVAPPQSSIGSNAENGGTEHTNDNRVALIC

Query:  SCICGH
        SCICGH
Subjt:  SCICGH

A0A5D3DL53 Uncharacterized protein

1.1e-89

85.92

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Query:  MAQQGDGWPLGLQPLNVRVGVPGNRDYLGSVSFNTLMTASPISFSDSSSDLDTESTGSFFHDKSITLGSLIGVSNILELSRRSIRGRRTESTKDKRSNAK
        MAQQGDGWPLGLQPLNVRVGVPGNRDYLGSVSFNTLMTASPISFSDSSSDLDTESTGSFFHDKSITLGSLIGVSNILELSR                   
Subjt:  MAQQGDGWPLGLQPLNVRVGVPGNRDYLGSVSFNTLMTASPISFSDSSSDLDTESTGSFFHDKSITLGSLIGVSNILELSRRSIRGRRTESTKDKRSNAK

Query:  SRTWFFSLCSRESTDADSIESGPSLGHFLAEERRAADENRRNNQSEIMYGADELELAQFGPEPNSLFINGCVAPPQSSIGSNAENGGTEHTNDNRVALIC
                  RESTDADSIESGPSLGHFLAEERRAADENRRNNQSEIMYGADELELAQFGPEPNSLFINGCVAPPQSSIGSNAENGGTEHTNDNRVALIC
Subjt:  SRTWFFSLCSRESTDADSIESGPSLGHFLAEERRAADENRRNNQSEIMYGADELELAQFGPEPNSLFINGCVAPPQSSIGSNAENGGTEHTNDNRVALIC

Query:  SCICGH
        SCICGH
Subjt:  SCICGH

A0A6J1KX21 uncharacterized protein At3g17950-like

4.9e-90

81.82

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Query:  MAQQGDGWPLGLQPLNVRVGVPGNRDYLGSVSFNTLMTASPISFSDSSSDLDTESTGSFFHDKSITLGSLIGVSNILELSRRSIRGRRTESTKDKRSNAK
        MAQQG+GWPLGLQPLN+RVGVPGNRDYLGS+SFNTL+TASPISF+DSSSDLDTESTGSFFHDKSITLGSLIGVSNILELSRRSIRGRRTESTK+KRSN +
Subjt:  MAQQGDGWPLGLQPLNVRVGVPGNRDYLGSVSFNTLMTASPISFSDSSSDLDTESTGSFFHDKSITLGSLIGVSNILELSRRSIRGRRTESTKDKRSNAK

Query:  SRTWFFSLCSRESTDADSIESGPSLGHFLAEERRAADENRRNNQSEIMYGADELELAQFGPEPNSLFINGCVAPPQSSIGSNAE---NGGTEHTNDNRVA
        SRTW FSLCSR++TDADS+ +GPSLG FL EERRAADENRR NQS +MYG DE+ELAQ+ PEPNSLFINGCVAPPQ S+GS+A+   NGGTE  ND+ +A
Subjt:  SRTWFFSLCSRESTDADSIESGPSLGHFLAEERRAADENRRNNQSEIMYGADELELAQFGPEPNSLFINGCVAPPQSSIGSNAE---NGGTEHTNDNRVA

Query:  LICSCICGH
        L+CS +CGH
Subjt:  LICSCICGH

SwissProt top hits

e value

%identity

Alignment

Q6DR24 Uncharacterized protein At3g17950

1.7e-07

35.43

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Query:  ASPISFSDSSSDLDTESTGSFFHDKSITLGSLIG------------------VSNILELSR-RSIRGRRTESTKDKRSNA------KSRTWFFSLCSRES
        +SP   S SSSDLDTESTGSFFHD+SITLG+L+G                  VS  + +SR  S   RR    K   SN+      + R W +  C  + 
Subjt:  ASPISFSDSSSDLDTESTGSFFHDKSITLGSLIG------------------VSNILELSR-RSIRGRRTESTKDKRSNA------KSRTWFFSLCSRES

Query:  TDA--DSIESG------PSLGHFLAEERRAADENRRNNQSEIMYGADELELAQFGP--EPNSLFINGCVAPPQSS
         DA  + I  G       SLG +L  ERR  DE   N+    +  A         P     +LF +G V PP S+
Subjt:  TDA--DSIESG------PSLGHFLAEERRAADENRRNNQSEIMYGADELELAQFGP--EPNSLFINGCVAPPQSS

Arabidopsis top hits

e value

%identity

Alignment

AT3G17950.1 unknown protein

1.2e-08

35.43

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Query:  ASPISFSDSSSDLDTESTGSFFHDKSITLGSLIG------------------VSNILELSR-RSIRGRRTESTKDKRSNA------KSRTWFFSLCSRES
        +SP   S SSSDLDTESTGSFFHD+SITLG+L+G                  VS  + +SR  S   RR    K   SN+      + R W +  C  + 
Subjt:  ASPISFSDSSSDLDTESTGSFFHDKSITLGSLIG------------------VSNILELSR-RSIRGRRTESTKDKRSNA------KSRTWFFSLCSRES

Query:  TDA--DSIESG------PSLGHFLAEERRAADENRRNNQSEIMYGADELELAQFGP--EPNSLFINGCVAPPQSS
         DA  + I  G       SLG +L  ERR  DE   N+    +  A         P     +LF +G V PP S+
Subjt:  TDA--DSIESG------PSLGHFLAEERRAADENRRNNQSEIMYGADELELAQFGP--EPNSLFINGCVAPPQSS

AT5G02440.1 unknown protein

2.3e-23

42.94

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Query:  MAQQGDGWPLGLQPLNVRVG--VPGNRDY-------LGSVSFNTLMTASPISFSDSSSDLDTESTGSFFHDKSITLGSLIGVSNILELSRRSIRGRRTES
        MA Q +GWPLGL+P+N R+G    G   +        GS+SF++L++ SP   S SSSDLD++S GSFF D+S TLG+LIG+S+ LELSRRS R R  ++
Subjt:  MAQQGDGWPLGLQPLNVRVG--VPGNRDY-------LGSVSFNTLMTASPISFSDSSSDLDTESTGSFFHDKSITLGSLIGVSNILELSRRSIRGRRTES

Query:  ----TKDKRSNAKS--RTWFFSLCSRESTDA-------------DSIESGPSLGHFLAEERRAADENRRN
                  N K+  + W FS+CS+ ST+A             D   +  SLGHFL  ERRA     R+
Subjt:  ----TKDKRSNAKS--RTWFFSLCSRESTDA-------------DSIESGPSLGHFLAEERRAADENRRN

Sequences

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CDS sequence

Show/hide CDS sequence

ATGGCTCAACAGGGTGATGGATGGCCTCTTGGTCTACAGCCTCTGAATGTAAGAGTTGGAGTACCTGGAAATCGTGACTATTTGGGATCAGTGTCTTTCAACACTTTGAT
GACTGCTTCTCCTATTTCTTTCTCTGATTCTTCATCCGACTTGGACACTGAGTCAACAGGATCTTTCTTCCATGACAAGAGCATAACACTTGGGAGTCTCATAGGAGTTT
CCAACATTTTAGAACTCTCAAGAAGGTCAATCAGGGGAAGAAGAACAGAGAGCACAAAGGACAAGAGGAGCAATGCCAAGTCTAGAACATGGTTTTTCTCTTTGTGTTCT
AGGGAGAGTACCGATGCAGATAGCATCGAAAGTGGCCCGTCGTTAGGCCATTTCTTGGCAGAAGAAAGAAGAGCAGCCGACGAAAATCGGAGAAATAATCAGAGTGAAAT
CATGTATGGAGCAGATGAATTAGAATTAGCTCAGTTTGGTCCAGAGCCAAACTCCCTATTCATCAATGGCTGTGTGGCACCTCCTCAATCTAGCATTGGTTCAAATGCTG
AAAATGGAGGAACTGAGCATACAAATGACAATAGAGTTGCACTGATTTGTTCTTGCATTTGTGGACACTGA

mRNA sequence

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Protein sequence

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MAQQGDGWPLGLQPLNVRVGVPGNRDYLGSVSFNTLMTASPISFSDSSSDLDTESTGSFFHDKSITLGSLIGVSNILELSRRSIRGRRTESTKDKRSNAKSRTWFFSLCS
RESTDADSIESGPSLGHFLAEERRAADENRRNNQSEIMYGADELELAQFGPEPNSLFINGCVAPPQSSIGSNAENGGTEHTNDNRVALICSCICGH

IVF0018559 (gene) of Melon (IVF77) v1 genome