| GenBank top hits | e value | %identity | Alignment |
|---|
| KAA0042324.1 Retrovirus-related Pol polyprotein from transposon 297 family [Cucumis melo var. makuwa] | 2.67e-99 | 60.13 | Show/hide |
Query: NEFARTCPTILLG--RPFLKTAKAIINVDKGLLSVEFNGNVVSFKTIYDVKSSNDHVSLCALDTFESLKTLEEHDKFNELIDQATLEYVDNEFAKEKPSD
N + R P + G P + + +GLLSVEF+GNVVS DVKSSN HVSLCALDT ESLK LEEHDKFNELIDQATLE+V+NEFAK KPSD
Subjt: NEFARTCPTILLG--RPFLKTAKAIINVDKGLLSVEFNGNVVSFKTIYDVKSSNDHVSLCALDTFESLKTLEEHDKFNELIDQATLEYVDNEFAKEKPSD
Query: D-LSIFLDFITSINDEHALVENVTTHE-----------KHSLG---------------IDNDHDISTHIKNFEKENDLENDSYEVYLHKECENSNSNELT
D LSIFLDF+TS+NDE+ LV+N+ T+E +H G I+NDHD S HIKNFEKENDLE D EV LHKECE+SN+NELT
Subjt: D-LSIFLDFITSINDEHALVENVTTHE-----------KHSLG---------------IDNDHDISTHIKNFEKENDLENDSYEVYLHKECENSNSNELT
Query: LPLQENGIKLKVLPSHLEYVFLDEKNTYLVISLKELIEEQEARLLKTLKRHRQAIGAK------------------REVLKLKDASIIYLVLHSTWLSPI
PLQENGIKLKVLPSHL+YVFL EKNTY VI KEL +EQEARLL+TLK HRQAIGAK +EV KLKD IIY V HSTW+S I
Subjt: LPLQENGIKLKVLPSHLEYVFLDEKNTYLVISLKELIEEQEARLLKTLKRHRQAIGAK------------------REVLKLKDASIIYLVLHSTWLSPI
Query: HIVPKK
++VPKK
Subjt: HIVPKK
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| KAA0054444.1 Retrovirus-related Pol polyprotein from transposon 297 family [Cucumis melo var. makuwa] | 1.16e-100 | 74.24 | Show/hide |
Query: MNNEFARTCPTILLGRPFLKTAKAIINVDKGLLSVEFNGNVVSFKTIYDVKSSNDHVSLCALDTFESLKTLEEHDKFNELIDQATLEYVDNEFAKEKPSD
MNNEFARTCPTILLGRPFLKTAKAIINVDKGLLSVEFNGNVVSFKTIYDVKSSNDHVSLCALDTFESLKTLEEHDKFNELIDQATLEYVDNEFAKEKPSD
Subjt: MNNEFARTCPTILLGRPFLKTAKAIINVDKGLLSVEFNGNVVSFKTIYDVKSSNDHVSLCALDTFESLKTLEEHDKFNELIDQATLEYVDNEFAKEKPSD
Query: DLSIFLDFITSINDEHALVENVTTHEKHSLGIDNDHDISTHIKNFEKENDLENDSYEVYLHKECENSNSNELTLPLQENGIKLKVLPSHLEYVFLDEKNT
DLSIFLDFITSINDEHAL ENGIKLKVLPSHLEYVFLDEKNT
Subjt: DLSIFLDFITSINDEHALVENVTTHEKHSLGIDNDHDISTHIKNFEKENDLENDSYEVYLHKECENSNSNELTLPLQENGIKLKVLPSHLEYVFLDEKNT
Query: YLVISLKELIEEQEARLLKTLKRHRQAIG
YLVISLKELIEEQEARLLKTLKRHRQAIG
Subjt: YLVISLKELIEEQEARLLKTLKRHRQAIG
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| KAA0065429.1 Retrovirus-related Pol polyprotein from transposon 17.6 [Cucumis melo var. makuwa] | 3.13e-68 | 51.51 | Show/hide |
Query: MNNEFARTCPTILLGRPFLKTAKAIINVDKGLLSVEFNGNVVSFKTIYDVKSSNDHVSLCALDTFESLKTLEEHDKFNELIDQATLEYVDNEFAKEKPSD
MN EFART PTILLGRPFLKTAKAIINVDKGLLSVEF+GNV+SF I+D +VDNEFAKEKP+D
Subjt: MNNEFARTCPTILLGRPFLKTAKAIINVDKGLLSVEFNGNVVSFKTIYDVKSSNDHVSLCALDTFESLKTLEEHDKFNELIDQATLEYVDNEFAKEKPSD
Query: D-LSIFLDFITSINDEHALVENVTTHEKHSLG---------------------------IDNDHDISTHIKNFEKENDLENDSYEVYLHKECENSNSNEL
D LSIFL+F+TSINDEHALV+NVTTHE+H+LG IDNDHDI+THIKNFEKENDL+NDS CE
Subjt: D-LSIFLDFITSINDEHALVENVTTHEKHSLG---------------------------IDNDHDISTHIKNFEKENDLENDSYEVYLHKECENSNSNEL
Query: TLPLQENGIKLKVLPSHLEYVFLDEKNTYLVISLKELIEEQEARLLKTLKRHRQAIGA---------KREVLKLKDASIIYLVLHSTWLSPIHIVPKKI
EN I+LKVLP HL+YVFL EKNTY+V+S+ E + L K GA K+EVLKLKD IIYLVLH+TWL+PIH+V KKI
Subjt: TLPLQENGIKLKVLPSHLEYVFLDEKNTYLVISLKELIEEQEARLLKTLKRHRQAIGA---------KREVLKLKDASIIYLVLHSTWLSPIHIVPKKI
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| KAA0066992.1 Transposon Ty3-I Gag-Pol polyprotein [Cucumis melo var. makuwa] | 6.79e-70 | 50.34 | Show/hide |
Query: LKTAKAIINVDKGLLSVEFNGNVVSFKTIYDVKSSNDHVSLCALDTFESLKTLEEHDKFNELIDQATLEYVDNEFAKEKPSDD-LSIFLDFITSINDEHA
L AI ++ + LLSVEF+ +VVSF YDVKSSNDHVSLCALDT ESL+ LEEHD FNELIDQATLEYV+NEFAK KPSDD LSIFL F+ S+NDEH
Subjt: LKTAKAIINVDKGLLSVEFNGNVVSFKTIYDVKSSNDHVSLCALDTFESLKTLEEHDKFNELIDQATLEYVDNEFAKEKPSDD-LSIFLDFITSINDEHA
Query: LVENVTTHEKHSLGID----NDHDISTHIKNFEKENDLENDSYEVYLHKECENSNSNELTLPLQENGI---KLKVLPSHLEYVFLDEKNTYLVISLKELI
V+N+ T+E+H+L D N+HD+ +IK+ +NG KLKVLPSHL+Y FL EKNTY VI LKEL
Subjt: LVENVTTHEKHSLGID----NDHDISTHIKNFEKENDLENDSYEVYLHKECENSNSNELTLPLQENGI---KLKVLPSHLEYVFLDEKNTYLVISLKELI
Query: EEQEARLLKTLKRHRQAIG-----------------------------------------AKREVLKLKDASIIYLVLHSTWLSPIHIVPKK
+EQEARL +TLKR+RQA G K+EVLKLKD IIYLV HSTW+S IH+VPKK
Subjt: EEQEARLLKTLKRHRQAIG-----------------------------------------AKREVLKLKDASIIYLVLHSTWLSPIHIVPKK
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| KAE8647060.1 hypothetical protein Csa_022980 [Cucumis sativus] | 6.30e-105 | 61.23 | Show/hide |
Query: MNNEFARTCPTILLGRPFLKTAKAIINVDKGLLSVEFNGNVVSFKTIYDVKSSNDHVSLCALDTFESLKTLEEHDKFNELIDQATLEYVDNEFAKEKPSD
MN+EFART PTILLGRP LKTAKA+INVDKGLLSVEF+G+VVSF D+KSSNDHVSLCALDT ESL+TLEE DK NELIDQATLEYVDNEF+KEKPSD
Subjt: MNNEFARTCPTILLGRPFLKTAKAIINVDKGLLSVEFNGNVVSFKTIYDVKSSNDHVSLCALDTFESLKTLEEHDKFNELIDQATLEYVDNEFAKEKPSD
Query: D-LSIFLDFITSINDEHALVENVTTHEKHSLG---------------------------IDNDHDISTHIKNFEK-ENDLENDSYEVYLHKECEN----S
D LSIFL+F+ SINDEHALV+NVTTH++H+LG IDN+ D S HI+ +K ENDLEND EVYLHKECEN S
Subjt: D-LSIFLDFITSINDEHALVENVTTHEKHSLG---------------------------IDNDHDISTHIKNFEK-ENDLENDSYEVYLHKECEN----S
Query: NSNELTLPLQENGIKLKVLPSHLEYVFLDEKNTYLVISLKELIEEQEARLLKTLKRHRQAIG--------------------------------------
NSNELTLPLQ+NGI++KV PSHL+YVFL EKNTY I KEL EEQEARLL+TLKRH+QAIG
Subjt: NSNELTLPLQENGIKLKVLPSHLEYVFLDEKNTYLVISLKELIEEQEARLLKTLKRHRQAIG--------------------------------------
Query: ---AKREVLKLKDASIIYLVLHSTW
K+EVLKLK A IIY V HSTW
Subjt: ---AKREVLKLKDASIIYLVLHSTW
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| TrEMBL top hits | e value | %identity | Alignment |
|---|
| A0A5A7TE46 Uncharacterized protein | 1.7e-45 | 65.03 | Show/hide |
Query: MNNEFARTCPTILLGRPFLKTAKAIINVDKGLLSVEFNGNVVSFKTIYDVKSSNDHVSLCALDTFESLKTLEEHDKFNELIDQATLEYVDNEFAKEKPS-
MN+EF+RT PTILLG+ FLK AKA INVDKGLLSVEF+G++ SF + DV SSNDHVSLCALDT ESLKT EEHDKFNELIDQ TLEYV+NEFAK K S
Subjt: MNNEFARTCPTILLGRPFLKTAKAIINVDKGLLSVEFNGNVVSFKTIYDVKSSNDHVSLCALDTFESLKTLEEHDKFNELIDQATLEYVDNEFAKEKPS-
Query: DDLSIFLDFITSINDEHALVENVTTHEKHSLGID----NDHDISTHIKNFEKEN----DLEND
DD SIFLDF S+NDEHALV+N+ T+ H+L D N+H + +I N + D+END
Subjt: DDLSIFLDFITSINDEHALVENVTTHEKHSLGID----NDHDISTHIKNFEKEN----DLEND
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| A0A5A7VIZ2 Retrovirus-related Pol polyprotein from transposon 17.6 | 4.4e-57 | 51.51 | Show/hide |
Query: MNNEFARTCPTILLGRPFLKTAKAIINVDKGLLSVEFNGNVVSFKTIYDVKSSNDHVSLCALDTFESLKTLEEHDKFNELIDQATLEYVDNEFAKEKPS-
MN EFART PTILLGRPFLKTAKAIINVDKGLLSVEF+GNV+SF I+D +VDNEFAKEKP+
Subjt: MNNEFARTCPTILLGRPFLKTAKAIINVDKGLLSVEFNGNVVSFKTIYDVKSSNDHVSLCALDTFESLKTLEEHDKFNELIDQATLEYVDNEFAKEKPS-
Query: DDLSIFLDFITSINDEHALVENVTTHEKHSLG---------------------------IDNDHDISTHIKNFEKENDLENDSYEVYLHKECENSNSNEL
DDLSIFL+F+TSINDEHALV+NVTTHE+H+LG IDNDHDI+THIKNFEKENDL+NDS CE
Subjt: DDLSIFLDFITSINDEHALVENVTTHEKHSLG---------------------------IDNDHDISTHIKNFEKENDLENDSYEVYLHKECENSNSNEL
Query: TLPLQENGIKLKVLPSHLEYVFLDEKNTYLVISLKELIEEQEARLLKTLKRHRQAIGA---------KREVLKLKDASIIYLVLHSTWLSPIHIVPKKI
EN I+LKVLP HL+YVFL EKNTY+V+S+ E + L K GA K+EVLKLKD IIYLVLH+TWL+PIH+V KKI
Subjt: TLPLQENGIKLKVLPSHLEYVFLDEKNTYLVISLKELIEEQEARLLKTLKRHRQAIGA---------KREVLKLKDASIIYLVLHSTWLSPIHIVPKKI
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| A0A5D3BDS0 Transposon Ty3-I Gag-Pol polyprotein | 3.1e-58 | 50.34 | Show/hide |
Query: LKTAKAIINVDKGLLSVEFNGNVVSFKTIYDVKSSNDHVSLCALDTFESLKTLEEHDKFNELIDQATLEYVDNEFAKEKPS-DDLSIFLDFITSINDEHA
L AI ++ + LLSVEF+ +VVSF YDVKSSNDHVSLCALDT ESL+ LEEHD FNELIDQATLEYV+NEFAK KPS DDLSIFL F+ S+NDEH
Subjt: LKTAKAIINVDKGLLSVEFNGNVVSFKTIYDVKSSNDHVSLCALDTFESLKTLEEHDKFNELIDQATLEYVDNEFAKEKPS-DDLSIFLDFITSINDEHA
Query: LVENVTTHEKHSLGID----NDHDISTHIKNFEKENDLENDSYEVYLHKECENSNSNELTLPLQENG---IKLKVLPSHLEYVFLDEKNTYLVISLKELI
V+N+ T+E+H+L D N+HD+ +IK+ +NG KLKVLPSHL+Y FL EKNTY VI LKEL
Subjt: LVENVTTHEKHSLGID----NDHDISTHIKNFEKENDLENDSYEVYLHKECENSNSNELTLPLQENG---IKLKVLPSHLEYVFLDEKNTYLVISLKELI
Query: EEQEARLLKTLKRHRQAIG-----------------------------------------AKREVLKLKDASIIYLVLHSTWLSPIHIVPKK
+EQEARL +TLKR+RQA G K+EVLKLKD IIYLV HSTW+S IH+VPKK
Subjt: EEQEARLLKTLKRHRQAIG-----------------------------------------AKREVLKLKDASIIYLVLHSTWLSPIHIVPKK
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| A0A5D3CSW0 Retrovirus-related Pol polyprotein from transposon 297 family | 5.4e-79 | 70.56 | Show/hide |
Query: MNNEFARTCPTILLGRPFLKTAKAIINVDKGLLSVEFNGNVVSFKTIYDVKSSNDHVSLCALDTFESLKTLEEHDKFNELIDQATLEYVDNEFAKEKPSD
MNNEFARTCPTILLGRPFLKTAKAIINVDKGLLSVEFNGNVVSFKTIYDVKSSNDHVSLCALDTFESLKTLEEHDKFNELIDQATLEYVDNEFAKEKPSD
Subjt: MNNEFARTCPTILLGRPFLKTAKAIINVDKGLLSVEFNGNVVSFKTIYDVKSSNDHVSLCALDTFESLKTLEEHDKFNELIDQATLEYVDNEFAKEKPSD
Query: DLSIFLDFITSINDEHALVENVTTHEKHSLGIDNDHDISTHIKNFEKENDLENDSYEVYLHKECENSNSNELTLPLQENGIKLKVLPSHLEYVFLDEKNT
DLSIFLDFITSINDEHAL ENGIKLKVLPSHLEYVFLDEKNT
Subjt: DLSIFLDFITSINDEHALVENVTTHEKHSLGIDNDHDISTHIKNFEKENDLENDSYEVYLHKECENSNSNELTLPLQENGIKLKVLPSHLEYVFLDEKNT
Query: YLVISLKELIEEQEARLLKTLKRHRQAIGAKREVLKLKDASIIYLVLH
YLVISLKELIEEQEARLLKTLKRHRQAIG LK D S +H
Subjt: YLVISLKELIEEQEARLLKTLKRHRQAIGAKREVLKLKDASIIYLVLH
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| A0A5D3CW21 Retrovirus-related Pol polyprotein from transposon 297 family | 1.7e-80 | 60.13 | Show/hide |
Query: NEFARTCPTILLG--RPFLKTAKAIINVDKGLLSVEFNGNVVSFKTIYDVKSSNDHVSLCALDTFESLKTLEEHDKFNELIDQATLEYVDNEFAKEKPS-
N + R P + G P + + +GLLSVEF+GNVVS DVKSSN HVSLCALDT ESLK LEEHDKFNELIDQATLE+V+NEFAK KPS
Subjt: NEFARTCPTILLG--RPFLKTAKAIINVDKGLLSVEFNGNVVSFKTIYDVKSSNDHVSLCALDTFESLKTLEEHDKFNELIDQATLEYVDNEFAKEKPS-
Query: DDLSIFLDFITSINDEHALVENVTTHE-----------KHSLG---------------IDNDHDISTHIKNFEKENDLENDSYEVYLHKECENSNSNELT
DDLSIFLDF+TS+NDE+ LV+N+ T+E +H G I+NDHD S HIKNFEKENDLE D EV LHKECE+SN+NELT
Subjt: DDLSIFLDFITSINDEHALVENVTTHE-----------KHSLG---------------IDNDHDISTHIKNFEKENDLENDSYEVYLHKECENSNSNELT
Query: LPLQENGIKLKVLPSHLEYVFLDEKNTYLVISLKELIEEQEARLLKTLKRHRQAIGA------------------KREVLKLKDASIIYLVLHSTWLSPI
PLQENGIKLKVLPSHL+YVFL EKNTY VI KEL +EQEARLL+TLK HRQAIGA K+EV KLKD IIY V HSTW+S I
Subjt: LPLQENGIKLKVLPSHLEYVFLDEKNTYLVISLKELIEEQEARLLKTLKRHRQAIGA------------------KREVLKLKDASIIYLVLHSTWLSPI
Query: HIVPKK
++VPKK
Subjt: HIVPKK
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