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IVF0018592 (gene) of Melon (IVF77) v1 genome

Gene IDIVF0018592
OrganismCucumis melo ssp. agrestis cv. IVF77 (Melon (IVF77) v1)
DescriptionRetrovirus-related Pol polyprotein from transposon 17.6
Genome locationchr08:27119135..27119918
RNA-Seq ExpressionIVF0018592
SyntenyIVF0018592
Gene Ontology termsNA
InterPro domainsIPR021109 - Aspartic peptidase domain superfamily


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0052866.1 uncharacterized protein E6C27_scaffold33G00230 [Cucumis melo var. makuwa]4.52e-4653.23Show/hide
Query:  LATSDVFKNGDLKKMTNLGSFTIPCYIGSMDLGRALCDLRASINLRLLFVFKNLGIGKVKPTTVALHLVDISIVQPKGRIENALVKVDKFIFPTD-----
        LATSD+FKNG  +KMTN  SFT+PC IG MDLGRALC+LR SINL LL +FK L I +V+PT + L+  D  I +P+ +I++         FPTD     
Subjt:  LATSDVFKNGDLKKMTNLGSFTIPCYIGSMDLGRALCDLRASINLRLLFVFKNLGIGKVKPTTVALHLVDISIVQPKGRIENALVKVDKFIFPTD-----

Query:  ---FIILDYEADREEEVIVELFSSEEFIKEC-PKDILEEVNVVSDVRKFEPLNLQNKGDKKIKPSFEKQPEFELKPLPTNLKYAYL
           F+  +Y    E+E   ELFS+EEF +E  P  IL+EVNVVS  +KFE L+LQ KG+KK KPS E+ PE ELK LP +LKY YL
Subjt:  ---FIILDYEADREEEVIVELFSSEEFIKEC-PKDILEEVNVVSDVRKFEPLNLQNKGDKKIKPSFEKQPEFELKPLPTNLKYAYL

KAA0059830.1 uncharacterized protein E6C27_scaffold108G001100 [Cucumis melo var. makuwa]2.02e-4367.21Show/hide
Query:  GKVKPTTVALHLVDISIVQPKGRIENALVKVDKFIFPTDFIILDYEADREEEVIVELFSSEEFIKECPKDILEEVNVVSDVRKFEPLNLQNKGDKKIKPS
         +VKPTT+ L LV  SI  P+G+ E+ LVKVDK IFP DFIILDYEADRE      LFSSEEF++E PK +LEEVNVVSDVRKFEPL+LQ KG+KKIK S
Subjt:  GKVKPTTVALHLVDISIVQPKGRIENALVKVDKFIFPTDFIILDYEADREEEVIVELFSSEEFIKECPKDILEEVNVVSDVRKFEPLNLQNKGDKKIKPS

Query:  FEKQPEFELKPLPTNLKYAYLG
         +  P+ ELK LPT+L YAYLG
Subjt:  FEKQPEFELKPLPTNLKYAYLG

KAA0067912.1 uncharacterized protein E6C27_scaffold138G00780 [Cucumis melo var. makuwa]4.16e-10393.53Show/hide
Query:  MNIRQIALTLATSDVFKNGDLKKMTNLGSFTIPCYIGSMDLGRALCDLRASINLRLLFVFKNLGIGKVKPTTVALHLVDISIVQPKGRIENALVKVDKFI
        MNIRQIALTLATSDVFKNGD KKMTNLGSFTIPCYIGSMDLGRALCDLRASINLRLLFVFKNLGIGKVKPTTVALHLVDISIVQPKGRIENALVKVDKFI
Subjt:  MNIRQIALTLATSDVFKNGDLKKMTNLGSFTIPCYIGSMDLGRALCDLRASINLRLLFVFKNLGIGKVKPTTVALHLVDISIVQPKGRIENALVKVDKFI

Query:  FPTDFIILDYEADREEEVIVELFSSEEFIKECPKDILEEVNVVSDVRKFEPLNLQNKGDKKIKPSFEKQP
        FPT+FIILDYEADREEEVIVELFSSEEFIKECPKDILEEVNVVSDVRKFEPLNLQNKG K      E  P
Subjt:  FPTDFIILDYEADREEEVIVELFSSEEFIKECPKDILEEVNVVSDVRKFEPLNLQNKGDKKIKPSFEKQP

TYK04302.1 uncharacterized protein E5676_scaffold527G00310 [Cucumis melo var. makuwa]6.17e-10594.71Show/hide
Query:  MNIRQIALTLATSDVFKNGDLKKMTNLGSFTIPCYIGSMDLGRALCDLRASINLRLLFVFKNLGIGKVKPTTVALHLVDISIVQPKGRIENALVKVDKFI
        MNIRQIALTLATSDVFKNGDLKKMTNLGSFTIPCYIGSMDLGRALCDLRASINLRLLFVFKNLGIGKVKPTTVALHLVDISIVQPKGRIENALVKVDKFI
Subjt:  MNIRQIALTLATSDVFKNGDLKKMTNLGSFTIPCYIGSMDLGRALCDLRASINLRLLFVFKNLGIGKVKPTTVALHLVDISIVQPKGRIENALVKVDKFI

Query:  FPTDFIILDYEADREEEVIVELFSSEEFIKECPKDILEEVNVVSDVRKFEPLNLQNKGDKKIKPSFEKQP
        FPTDFIILDYEADREEEVIVELFSSEEFIKECPKDILEEVNVVSDVRKFEPLNLQNKG K      E  P
Subjt:  FPTDFIILDYEADREEEVIVELFSSEEFIKECPKDILEEVNVVSDVRKFEPLNLQNKGDKKIKPSFEKQP

XP_038874990.1 uncharacterized protein LOC120067513 [Benincasa hispida]9.84e-4242.86Show/hide
Query:  IALTLATSDVFKNGDLKKMTNLGSFTIPCYIGSMDLGRALCDLRASINLRLLFVFKNLGIGKVKPTTVALHLVDISIVQPKGRIENALVKVDKFIFPTDF
        IALT   + +  N   KK  NLGSFT+PC IG +D+G ALCDL ASINL  L +FK LGIG+ +PT+V LHL D +I  P+G+IE+ LVKVD  IFP DF
Subjt:  IALTLATSDVFKNGDLKKMTNLGSFTIPCYIGSMDLGRALCDLRASINLRLLFVFKNLGIGKVKPTTVALHLVDISIVQPKGRIENALVKVDKFIFPTDF

Query:  IILDYEADREE------------EVIVELFSSEEFIK--------------------ECPKDILE----EVNVVS------DVRKFEPLNLQNKGDKKIK
        IILDYEADRE             +V++++   E  I+                    +C  + +E    E NV        ++++ EP +L  +  K  +
Subjt:  IILDYEADREE------------EVIVELFSSEEFIK--------------------ECPKDILE----EVNVVS------DVRKFEPLNLQNKGDKKIK

Query:  PSFEKQPEFELKPLPTNLKYAYLG
        PS E+ PE ELK LP +LKYA+LG
Subjt:  PSFEKQPEFELKPLPTNLKYAYLG

TrEMBL top hitse value%identityAlignment
A0A5A7UF79 Uncharacterized protein9.3e-3853.23Show/hide
Query:  LATSDVFKNGDLKKMTNLGSFTIPCYIGSMDLGRALCDLRASINLRLLFVFKNLGIGKVKPTTVALHLVDISIVQPKGRIENALVKVDKFIFPTD-----
        LATSD+FKNG  +KMTN  SFT+PC IG MDLGRALC+LR SINL LL +FK L I +V+PT + L+  D  I +P+ +I++         FPTD     
Subjt:  LATSDVFKNGDLKKMTNLGSFTIPCYIGSMDLGRALCDLRASINLRLLFVFKNLGIGKVKPTTVALHLVDISIVQPKGRIENALVKVDKFIFPTD-----

Query:  ---FIILDYEADREEEVIVELFSSEEFIKE-CPKDILEEVNVVSDVRKFEPLNLQNKGDKKIKPSFEKQPEFELKPLPTNLKYAYL
           F+  +Y    E+E   ELFS+EEF +E  P  IL+EVNVVS  +KFE L+LQ KG+KK KPS E+ PE ELK LP +LKY YL
Subjt:  ---FIILDYEADREEEVIVELFSSEEFIKE-CPKDILEEVNVVSDVRKFEPLNLQNKGDKKIKPSFEKQPEFELKPLPTNLKYAYL

A0A5A7VHV2 Uncharacterized protein7.5e-8093.53Show/hide
Query:  MNIRQIALTLATSDVFKNGDLKKMTNLGSFTIPCYIGSMDLGRALCDLRASINLRLLFVFKNLGIGKVKPTTVALHLVDISIVQPKGRIENALVKVDKFI
        MNIRQIALTLATSDVFKNGD KKMTNLGSFTIPCYIGSMDLGRALCDLRASINLRLLFVFKNLGIGKVKPTTVALHLVDISIVQPKGRIENALVKVDKFI
Subjt:  MNIRQIALTLATSDVFKNGDLKKMTNLGSFTIPCYIGSMDLGRALCDLRASINLRLLFVFKNLGIGKVKPTTVALHLVDISIVQPKGRIENALVKVDKFI

Query:  FPTDFIILDYEADREEEVIVELFSSEEFIKECPKDILEEVNVVSDVRKFEPLNLQNKGDKKIKPSFEKQP
        FPT+FIILDYEADREEEVIVELFSSEEFIKECPKDILEEVNVVSDVRKFEPLNLQNKG K      E  P
Subjt:  FPTDFIILDYEADREEEVIVELFSSEEFIKECPKDILEEVNVVSDVRKFEPLNLQNKGDKKIKPSFEKQP

A0A5D3BZI6 Uncharacterized protein3.1e-8194.71Show/hide
Query:  MNIRQIALTLATSDVFKNGDLKKMTNLGSFTIPCYIGSMDLGRALCDLRASINLRLLFVFKNLGIGKVKPTTVALHLVDISIVQPKGRIENALVKVDKFI
        MNIRQIALTLATSDVFKNGDLKKMTNLGSFTIPCYIGSMDLGRALCDLRASINLRLLFVFKNLGIGKVKPTTVALHLVDISIVQPKGRIENALVKVDKFI
Subjt:  MNIRQIALTLATSDVFKNGDLKKMTNLGSFTIPCYIGSMDLGRALCDLRASINLRLLFVFKNLGIGKVKPTTVALHLVDISIVQPKGRIENALVKVDKFI

Query:  FPTDFIILDYEADREEEVIVELFSSEEFIKECPKDILEEVNVVSDVRKFEPLNLQNKGDKKIKPSFEKQP
        FPTDFIILDYEADREEEVIVELFSSEEFIKECPKDILEEVNVVSDVRKFEPLNLQNKG K      E  P
Subjt:  FPTDFIILDYEADREEEVIVELFSSEEFIKECPKDILEEVNVVSDVRKFEPLNLQNKGDKKIKPSFEKQP

A0A5D3DNA6 Uncharacterized protein4.8e-3467.77Show/hide
Query:  KVKPTTVALHLVDISIVQPKGRIENALVKVDKFIFPTDFIILDYEADREEEVIVELFSSEEFIKECPKDILEEVNVVSDVRKFEPLNLQNKGDKKIKPSF
        +VKPTT+ L LV  SI  P+G+ E+ LVKVDK IFP DFIILDYEADR      ELFSSEEF++E PK +LEEVNVVSDVRKFEPL+LQ KG+KKIK S 
Subjt:  KVKPTTVALHLVDISIVQPKGRIENALVKVDKFIFPTDFIILDYEADREEEVIVELFSSEEFIKECPKDILEEVNVVSDVRKFEPLNLQNKGDKKIKPSF

Query:  EKQPEFELKPLPTNLKYAYLG
        +  P+ ELK LPT+L YAYLG
Subjt:  EKQPEFELKPLPTNLKYAYLG

A0A5D3E4P5 Retrovirus-related Pol polyprotein from transposon 17.61.9e-3552.47Show/hide
Query:  LKKMTNLGSFTIPCYIGSMDLGRALCDLRASINLRLLFVFKNLGIGKVKPTTVALHLVDISIVQPKGRIENALVKVDKFIFPTDFIILDYEADREEEVIV
        L+KM + G FT+ C IG MDL   LCD +A+IN   L +FK LGIG+ +P    L   D  I + + +IE  LVKVDKFIFPTD +ILDYEAD+E  +I+
Subjt:  LKKMTNLGSFTIPCYIGSMDLGRALCDLRASINLRLLFVFKNLGIGKVKPTTVALHLVDISIVQPKGRIENALVKVDKFIFPTDFIILDYEADREEEVIV

Query:  ELFSSEEFIKECPKDILEEVNVVSDVRKFEPLNLQNKGDKKIKPSFEKQPEFELKPLPTNLK
               F+   PK +LEE+N  S+ RKFEPLN Q KG+KK KPS EKQ E ELK L  +LK
Subjt:  ELFSSEEFIKECPKDILEEVNVVSDVRKFEPLNLQNKGDKKIKPSFEKQPEFELKPLPTNLK

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGAATATAAGACAAATAGCTCTAACACTAGCAACAAGTGATGTATTCAAGAATGGGGATCTAAAGAAGATGACAAATCTTGGAAGCTTCACTATACCCTGCTATATAGG
CAGTATGGATCTTGGTCGCGCACTATGCGACCTTAGAGCAAGTATCAACCTGAGGTTGCTCTTTGTTTTCAAGAACTTGGGGATTGGGAAGGTAAAACCTACTACAGTTG
CGCTCCACTTGGTTGACATATCCATTGTGCAGCCTAAGGGAAGGATTGAGAATGCGTTAGTTAAGGTGGACAAGTTCATATTTCCCACAGACTTCATCATTTTGGACTAT
GAAGCTGATCGGGAGGAAGAAGTCATTGTTGAGTTATTTAGCTCTGAAGAATTCATCAAAGAGTGCCCTAAAGATATTTTGGAGGAAGTGAACGTCGTGTCTGACGTGAG
AAAGTTCGAGCCTCTCAATCTGCAAAATAAAGGTGATAAAAAGATAAAGCCATCATTTGAGAAGCAACCAGAATTTGAGCTCAAGCCATTACCAACCAACCTGAAATATG
CATATTTGGGGAGAATGACACTTTTATTATCACCTTTGCCCACTTGA
mRNA sequenceShow/hide mRNA sequence
ATGAATATAAGACAAATAGCTCTAACACTAGCAACAAGTGATGTATTCAAGAATGGGGATCTAAAGAAGATGACAAATCTTGGAAGCTTCACTATACCCTGCTATATAGG
CAGTATGGATCTTGGTCGCGCACTATGCGACCTTAGAGCAAGTATCAACCTGAGGTTGCTCTTTGTTTTCAAGAACTTGGGGATTGGGAAGGTAAAACCTACTACAGTTG
CGCTCCACTTGGTTGACATATCCATTGTGCAGCCTAAGGGAAGGATTGAGAATGCGTTAGTTAAGGTGGACAAGTTCATATTTCCCACAGACTTCATCATTTTGGACTAT
GAAGCTGATCGGGAGGAAGAAGTCATTGTTGAGTTATTTAGCTCTGAAGAATTCATCAAAGAGTGCCCTAAAGATATTTTGGAGGAAGTGAACGTCGTGTCTGACGTGAG
AAAGTTCGAGCCTCTCAATCTGCAAAATAAAGGTGATAAAAAGATAAAGCCATCATTTGAGAAGCAACCAGAATTTGAGCTCAAGCCATTACCAACCAACCTGAAATATG
CATATTTGGGGAGAATGACACTTTTATTATCACCTTTGCCCACTTGA
Protein sequenceShow/hide protein sequence
MNIRQIALTLATSDVFKNGDLKKMTNLGSFTIPCYIGSMDLGRALCDLRASINLRLLFVFKNLGIGKVKPTTVALHLVDISIVQPKGRIENALVKVDKFIFPTDFIILDY
EADREEEVIVELFSSEEFIKECPKDILEEVNVVSDVRKFEPLNLQNKGDKKIKPSFEKQPEFELKPLPTNLKYAYLGRMTLLLSPLPT