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IVF0018610 (gene) of Melon (IVF77) v1 genome

Gene IDIVF0018610
OrganismCucumis melo ssp. agrestis cv. IVF77 (Melon (IVF77) v1)
DescriptionRetrotransposon protein
Genome locationchr01:7325000..7325167
RNA-Seq ExpressionIVF0018610
SyntenyIVF0018610
Gene Ontology termsGO:0016788 - hydrolase activity, acting on ester bonds (molecular function)
GO:0046872 - metal ion binding (molecular function)
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0052287.1 retrotransposon protein [Cucumis melo var. makuwa]3.00e-2587.27Show/hide
Query:  MTYCDDVEDVDEGDSAYATTTTTEDIHYIETTNKWSQWYNELAESMFTDWQLRNA
        MTYC+DV+DVDEGDS YATTT +EDIHYIETTNKWSQW N+LAESMFTDWQLRNA
Subjt:  MTYCDDVEDVDEGDSAYATTTTTEDIHYIETTNKWSQWYNELAESMFTDWQLRNA

KAA0054051.1 retrotransposon protein [Cucumis melo var. makuwa]2.09e-2887.27Show/hide
Query:  MTYCDDVEDVDEGDSAYATTTTTEDIHYIETTNKWSQWYNELAESMFTDWQLRNA
        MTYCDD++DVDEGDSAYATTT +EDIHYIETTN+WSQW +ELAESMFTDWQLRNA
Subjt:  MTYCDDVEDVDEGDSAYATTTTTEDIHYIETTNKWSQWYNELAESMFTDWQLRNA

KAA0059918.1 retrotransposon protein [Cucumis melo var. makuwa]2.94e-2683.64Show/hide
Query:  MTYCDDVEDVDEGDSAYATTTTTEDIHYIETTNKWSQWYNELAESMFTDWQLRNA
        MTYCDDV+DVDEG+SAYATTTTTED+HYIET N+WSQW++ELA+SMFTDWQL NA
Subjt:  MTYCDDVEDVDEGDSAYATTTTTEDIHYIETTNKWSQWYNELAESMFTDWQLRNA

KAA0066137.1 retrotransposon protein [Cucumis melo var. makuwa]5.09e-2787.27Show/hide
Query:  MTYCDDVEDVDEGDSAYATTTTTEDIHYIETTNKWSQWYNELAESMFTDWQLRNA
        MTYCD+V+DVDEGDSAYATTTT EDIHYIE TN+WSQW+N+LAESMFTDWQLRNA
Subjt:  MTYCDDVEDVDEGDSAYATTTTTEDIHYIETTNKWSQWYNELAESMFTDWQLRNA

KAA0066980.1 retrotransposon protein [Cucumis melo var. makuwa]3.92e-2581.82Show/hide
Query:  MTYCDDVEDVDEGDSAYATTTTTEDIHYIETTNKWSQWYNELAESMFTDWQLRNA
        MTYC++V+DVDEGDSAY TTT TEDI+YIETTN+WSQW++ELAES+FTDWQLRNA
Subjt:  MTYCDDVEDVDEGDSAYATTTTTEDIHYIETTNKWSQWYNELAESMFTDWQLRNA

TrEMBL top hitse value%identityAlignment
A0A5A7UCT7 Retrotransposon protein5.4e-2087.27Show/hide
Query:  MTYCDDVEDVDEGDSAYATTTTTEDIHYIETTNKWSQWYNELAESMFTDWQLRNA
        MTYC+DV+DVDEGDS YATTT +EDIHYIETTNKWSQW N+LAESMFTDWQLRNA
Subjt:  MTYCDDVEDVDEGDSAYATTTTTEDIHYIETTNKWSQWYNELAESMFTDWQLRNA

A0A5A7UXG4 Retrotransposon protein4.6e-1983.64Show/hide
Query:  MTYCDDVEDVDEGDSAYATTTTTEDIHYIETTNKWSQWYNELAESMFTDWQLRNA
        MTYCDDV+DVDEG+SAYATTTTTED+HYIET N+WSQW++ELA+SMFTDWQL NA
Subjt:  MTYCDDVEDVDEGDSAYATTTTTEDIHYIETTNKWSQWYNELAESMFTDWQLRNA

A0A5A7VGD3 Retrotransposon protein4.1e-2087.27Show/hide
Query:  MTYCDDVEDVDEGDSAYATTTTTEDIHYIETTNKWSQWYNELAESMFTDWQLRNA
        MTYCD+V+DVDEGDSAYATTTT EDIHYIE TN+WSQW+N+LAESMFTDWQLRNA
Subjt:  MTYCDDVEDVDEGDSAYATTTTTEDIHYIETTNKWSQWYNELAESMFTDWQLRNA

A0A5A7VL61 Retrotransposon protein2.7e-1985.45Show/hide
Query:  MTYCDDVEDVDEGDSAYATTTTTEDIHYIETTNKWSQWYNELAESMFTDWQLRNA
        MTYCDDVED DEGDS YATTTT+EDI YIETTN+WSQW+++LAESMFTDWQLRNA
Subjt:  MTYCDDVEDVDEGDSAYATTTTTEDIHYIETTNKWSQWYNELAESMFTDWQLRNA

A0A5D3BDZ0 Retrotransposon protein3.2e-2087.27Show/hide
Query:  MTYCDDVEDVDEGDSAYATTTTTEDIHYIETTNKWSQWYNELAESMFTDWQLRNA
        MTYCDD++DVDEGDSAYATTT +EDIHYIETTN+WSQW +ELAESMFTDWQLRNA
Subjt:  MTYCDDVEDVDEGDSAYATTTTTEDIHYIETTNKWSQWYNELAESMFTDWQLRNA

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGACATATTGCGACGACGTTGAAGACGTGGACGAGGGGGACTCCGCGTACGCGACAACCACCACTACAGAAGACATTCACTACATTGAGACGACAAACAAGTGGTCTCA
GTGGTACAATGAACTAGCCGAATCAATGTTCACAGATTGGCAGTTGCGTAATGCTTAG
mRNA sequenceShow/hide mRNA sequence
ATGACATATTGCGACGACGTTGAAGACGTGGACGAGGGGGACTCCGCGTACGCGACAACCACCACTACAGAAGACATTCACTACATTGAGACGACAAACAAGTGGTCTCA
GTGGTACAATGAACTAGCCGAATCAATGTTCACAGATTGGCAGTTGCGTAATGCTTAG
Protein sequenceShow/hide protein sequence
MTYCDDVEDVDEGDSAYATTTTTEDIHYIETTNKWSQWYNELAESMFTDWQLRNA