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IVF0018617 (gene) of Melon (IVF77) v1 genome

Gene IDIVF0018617
OrganismCucumis melo ssp. agrestis cv. IVF77 (Melon (IVF77) v1)
DescriptionTranscription factor bHLH36-like
Genome locationchr07:20308204..20308506
RNA-Seq ExpressionIVF0018617
SyntenyIVF0018617
Gene Ontology termsGO:0006357 - regulation of transcription by RNA polymerase II (biological process)
GO:2000112 - regulation of cellular macromolecule biosynthetic process (biological process)
GO:0005634 - nucleus (cellular component)
GO:0003677 - DNA binding (molecular function)
GO:0003700 - DNA-binding transcription factor activity (molecular function)
GO:0046872 - metal ion binding (molecular function)
GO:0046983 - protein dimerization activity (molecular function)
InterPro domainsIPR011598 - Myc-type, basic helix-loop-helix (bHLH) domain


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0033316.1 transcription factor bHLH36-like [Cucumis melo var. makuwa]2.79e-3671.84Show/hide
Query:  MDKGVVELGRERERQRRQEISALYMSLRTLLPLEFIKVICGTVHMERDKWREKKRKNKDQELTSDAMS------PRRRSLSPRRKDVEMRRMELRLGFSS
        MDK VVELGRERERQRRQEISALYM LR LLPLEFIKVICGTVH  RDK REKKRK KDQELT D +        R  S   RRKD+EMRR+ LRLGFS 
Subjt:  MDKGVVELGRERERQRRQEISALYMSLRTLLPLEFIKVICGTVHMERDKWREKKRKNKDQELTSDAMS------PRRRSLSPRRKDVEMRRMELRLGFSS

Query:  CIV
        C++
Subjt:  CIV
KAA0044825.1 transcription factor bHLH36-like [Cucumis melo var. makuwa]9.99e-15100Show/hide
Query:  MDKGVVELGRERERQRRQEISALYMSLRTLLPLEFIKV
        MDKGVVELGRERERQRRQEISALYMSLRTLLPLEFIKV
Subjt:  MDKGVVELGRERERQRRQEISALYMSLRTLLPLEFIKV
KAA0065871.1 retrotransposon protein [Cucumis melo var. makuwa]6.63e-2582.09Show/hide
Query:  MDKGVVELGRERERQRRQEISALYMSLRTLLPLEFIKVICGTVHMERDKWREKKRKNKDQELTSDAM
        MDKGVV+L RERERQRRQEI ALYM++RTLL LEFIKVICG VH ERDKWREKKRK KDQEL  D M
Subjt:  MDKGVVELGRERERQRRQEISALYMSLRTLLPLEFIKVICGTVHMERDKWREKKRKNKDQELTSDAM
TYK30150.1 transcription factor bHLH36 [Cucumis melo var. makuwa]2.15e-3188.06Show/hide
Query:  MDKGVVELGRERERQRRQEISALYMSLRTLLPLEFIKVICGTVHMERDKWREKKRKNKDQELTSDAM
        MDKG+VELGRERERQRRQEI ALYMSLRTLLPLEFIKVI GT+H  RDKWREKKRK KDQELT DAM
Subjt:  MDKGVVELGRERERQRRQEISALYMSLRTLLPLEFIKVICGTVHMERDKWREKKRKNKDQELTSDAM
XP_022967981.1 transcription factor bHLH118-like [Cucurbita maxima]1.77e-0592.86Show/hide
Query:  RERERQRRQEISALYMSLRTLLPLEFIK
        RERERQRRQE+ ALYMSLRTLLPLEFIK
Subjt:  RERERQRRQEISALYMSLRTLLPLEFIK
TrEMBL top hitse value%identityAlignment
A0A5A7STJ5 Transcription factor bHLH36-like3.7e-2771.43Show/hide
Query:  MDKGVVELGRERERQRRQEISALYMSLRTLLPLEFIKVICGTVHMERDKWREKKRKNKDQELTSDAMS------PRRRSLSPRRKDVEMRRMELRLGFSS
        MDK VVELGRERERQRRQEISALYM LR LLPLEFIKVICGTVH  RDK REKKRK KDQELT D +        R  S   RRKD+EMRR+ LRLGFS 
Subjt:  MDKGVVELGRERERQRRQEISALYMSLRTLLPLEFIKVICGTVHMERDKWREKKRKNKDQELTSDAMS------PRRRSLSPRRKDVEMRRMELRLGFSS

Query:  CIVRR
        C++ R
Subjt:  CIVRR
A0A5A7TTV0 Transcription factor bHLH36-like4.1e-10100Show/hide
Query:  MDKGVVELGRERERQRRQEISALYMSLRTLLPLEFIKV
        MDKGVVELGRERERQRRQEISALYMSLRTLLPLEFIKV
Subjt:  MDKGVVELGRERERQRRQEISALYMSLRTLLPLEFIKV
A0A5A7VJK9 Retrotransposon protein1.5e-2082.09Show/hide
Query:  MDKGVVELGRERERQRRQEISALYMSLRTLLPLEFIKVICGTVHMERDKWREKKRKNKDQELTSDAM
        MDKGVV+L RERERQRRQEI ALYM++RTLL LEFIKVICG VH ERDKWREKKRK KDQEL  D M
Subjt:  MDKGVVELGRERERQRRQEISALYMSLRTLLPLEFIKVICGTVHMERDKWREKKRKNKDQELTSDAM
A0A5D3E3K5 Transcription factor bHLH365.6e-2388.06Show/hide
Query:  MDKGVVELGRERERQRRQEISALYMSLRTLLPLEFIKVICGTVHMERDKWREKKRKNKDQELTSDAM
        MDKG+VELGRERERQRRQEI ALYMSLRTLLPLEFIKVI GT+H  RDKWREKKRK KDQELT DAM
Subjt:  MDKGVVELGRERERQRRQEISALYMSLRTLLPLEFIKVICGTVHMERDKWREKKRKNKDQELTSDAM
SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
AT5G51780.1 basic helix-loop-helix (bHLH) DNA-binding superfamily protein1.5e-0475Show/hide
Query:  RERERQRRQEISALYMSLRTLLPLEFIK
        RE ERQRRQE+++LY SLR+LLPL FIK
Subjt:  RERERQRRQEISALYMSLRTLLPLEFIK

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGACAAAGGCGTTGTTGAGTTAGGGAGAGAAAGAGAGAGACAAAGAAGACAAGAAATCAGTGCTCTTTATATGTCTCTAAGAACCCTACTTCCTCTTGAATTTATCAA
GGTAATTTGTGGGACTGTGCACATGGAAAGAGATAAATGGAGGGAGAAGAAACGAAAAAATAAAGATCAAGAACTCACAAGTGATGCTATGTCTCCTCGCCGTAGGTCTC
TGTCGCCAAGAAGAAAGGACGTGGAGATGAGAAGAATGGAGTTAAGGTTGGGGTTTTCGTCATGCATCGTTCGTCGTTCGTGA
mRNA sequenceShow/hide mRNA sequence
ATGGACAAAGGCGTTGTTGAGTTAGGGAGAGAAAGAGAGAGACAAAGAAGACAAGAAATCAGTGCTCTTTATATGTCTCTAAGAACCCTACTTCCTCTTGAATTTATCAA
GGTAATTTGTGGGACTGTGCACATGGAAAGAGATAAATGGAGGGAGAAGAAACGAAAAAATAAAGATCAAGAACTCACAAGTGATGCTATGTCTCCTCGCCGTAGGTCTC
TGTCGCCAAGAAGAAAGGACGTGGAGATGAGAAGAATGGAGTTAAGGTTGGGGTTTTCGTCATGCATCGTTCGTCGTTCGTGA
Protein sequenceShow/hide protein sequence
MDKGVVELGRERERQRRQEISALYMSLRTLLPLEFIKVICGTVHMERDKWREKKRKNKDQELTSDAMSPRRRSLSPRRKDVEMRRMELRLGFSSCIVRRS