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IVF0018643 (gene) of Melon (IVF77) v1 genome

Gene IDIVF0018643
OrganismCucumis melo ssp. agrestis cv. IVF77 (Melon (IVF77) v1)
DescriptionPMD domain-containing protein
Genome locationchr08:22856518..22856976
RNA-Seq ExpressionIVF0018643
SyntenyIVF0018643
Gene Ontology termsGO:0016021 - integral component of membrane (cellular component)
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0041757.1 putative mitochondrial protein [Cucumis melo var. makuwa]1.15e-112100Show/hide
Query:  MIYFTERFLFGVRHLVVFYDRNQLREDGLSLLVEKPWTGSFADHWPRLDNSSILPRLSVEIPLFEGKTAWVLQSSIHNEDPNSDRVLTLGQHLIEGQTRW
        MIYFTERFLFGVRHLVVFYDRNQLREDGLSLLVEKPWTGSFADHWPRLDNSSILPRLSVEIPLFEGKTAWVLQSSIHNEDPNSDRVLTLGQHLIEGQTRW
Subjt:  MIYFTERFLFGVRHLVVFYDRNQLREDGLSLLVEKPWTGSFADHWPRLDNSSILPRLSVEIPLFEGKTAWVLQSSIHNEDPNSDRVLTLGQHLIEGQTRW

Query:  GTMTKVPREFCFTDCYWEWLELVVGRNARLLYSACLYDVVTTYFYTYDRNSD
        GTMTKVPREFCFTDCYWEWLELVVGRNARLLYSACLYDVVTTYFYTYDRNSD
Subjt:  GTMTKVPREFCFTDCYWEWLELVVGRNARLLYSACLYDVVTTYFYTYDRNSD

KAA0053734.1 putative mitochondrial protein [Cucumis melo var. makuwa]8.24e-8680.92Show/hide
Query:  MIYFTERFLFGVRHLVVFYDRNQLREDGLSLLVEKPWTGSFADHWPRLDNSSILPRLSVEIPLFEGKTAWVLQSSIHNEDPNSDRVLTLGQHLIEGQTRW
        M+YFTERFL GVRHLV+  DRNQ REDGLSL+VEKPW G+FADHWPRLDN+S+LPRLSVEIPL EGK+AW+LQSSIHNE PNS R LTLGQ LIEGQTRW
Subjt:  MIYFTERFLFGVRHLVVFYDRNQLREDGLSLLVEKPWTGSFADHWPRLDNSSILPRLSVEIPLFEGKTAWVLQSSIHNEDPNSDRVLTLGQHLIEGQTRW

Query:  GTMTKVPREFCFTDCYWEWLELVVGRNARLLYSACLYDVVTTYFYTYDRNSD
        GT+TKVP EFCFTDCYWEWLELVVGRN RLLYS  LY  VT   Y+YDRNSD
Subjt:  GTMTKVPREFCFTDCYWEWLELVVGRNARLLYSACLYDVVTTYFYTYDRNSD

KAA0058006.1 uncharacterized protein E6C27_scaffold274G003110 [Cucumis melo var. makuwa]1.83e-8480.26Show/hide
Query:  MIYFTERFLFGVRHLVVFYDRNQLREDGLSLLVEKPWTGSFADHWPRLDNSSILPRLSVEIPLFEGKTAWVLQSSIHNEDPNSDRVLTLGQHLIEGQTRW
        M+YFTERFL GVRHL++ Y++NQ REDGLSL+VEKPW  +FADHWPRLDN+S+LPRLSVEIPL EGK+AWVLQSSIHNE PNS R LTLGQ LIEGQTRW
Subjt:  MIYFTERFLFGVRHLVVFYDRNQLREDGLSLLVEKPWTGSFADHWPRLDNSSILPRLSVEIPLFEGKTAWVLQSSIHNEDPNSDRVLTLGQHLIEGQTRW

Query:  GTMTKVPREFCFTDCYWEWLELVVGRNARLLYSACLYDVVTTYFYTYDRNSD
        GTMTKVP EF FTDCYWEWLELVVGRN RLLYS  LY  VT   YTYDRNSD
Subjt:  GTMTKVPREFCFTDCYWEWLELVVGRNARLLYSACLYDVVTTYFYTYDRNSD

KAA0061098.1 putative mitochondrial protein [Cucumis melo var. makuwa]5.00e-8578.29Show/hide
Query:  MIYFTERFLFGVRHLVVFYDRNQLREDGLSLLVEKPWTGSFADHWPRLDNSSILPRLSVEIPLFEGKTAWVLQSSIHNEDPNSDRVLTLGQHLIEGQTRW
        M+YFTERFL GVRHLV+  DRNQ REDGLSL+VEKPW G+FADHWPRLDN+S+L RLSVEIPL EGK+AWVLQS IH+E PNS R LT GQ LIEGQT W
Subjt:  MIYFTERFLFGVRHLVVFYDRNQLREDGLSLLVEKPWTGSFADHWPRLDNSSILPRLSVEIPLFEGKTAWVLQSSIHNEDPNSDRVLTLGQHLIEGQTRW

Query:  GTMTKVPREFCFTDCYWEWLELVVGRNARLLYSACLYDVVTTYFYTYDRNSD
        GT+TKVP EFCFTDCYWEWLELVVGRN RLLYS  LY  VT   YTYDRN+D
Subjt:  GTMTKVPREFCFTDCYWEWLELVVGRNARLLYSACLYDVVTTYFYTYDRNSD

XP_008442010.1 PREDICTED: uncharacterized protein LOC103486002 [Cucumis melo]5.71e-113100Show/hide
Query:  MIYFTERFLFGVRHLVVFYDRNQLREDGLSLLVEKPWTGSFADHWPRLDNSSILPRLSVEIPLFEGKTAWVLQSSIHNEDPNSDRVLTLGQHLIEGQTRW
        MIYFTERFLFGVRHLVVFYDRNQLREDGLSLLVEKPWTGSFADHWPRLDNSSILPRLSVEIPLFEGKTAWVLQSSIHNEDPNSDRVLTLGQHLIEGQTRW
Subjt:  MIYFTERFLFGVRHLVVFYDRNQLREDGLSLLVEKPWTGSFADHWPRLDNSSILPRLSVEIPLFEGKTAWVLQSSIHNEDPNSDRVLTLGQHLIEGQTRW

Query:  GTMTKVPREFCFTDCYWEWLELVVGRNARLLYSACLYDVVTTYFYTYDRNSD
        GTMTKVPREFCFTDCYWEWLELVVGRNARLLYSACLYDVVTTYFYTYDRNSD
Subjt:  GTMTKVPREFCFTDCYWEWLELVVGRNARLLYSACLYDVVTTYFYTYDRNSD

TrEMBL top hitse value%identityAlignment
A0A1S3B4Q9 uncharacterized protein LOC1034860028.3e-87100Show/hide
Query:  MIYFTERFLFGVRHLVVFYDRNQLREDGLSLLVEKPWTGSFADHWPRLDNSSILPRLSVEIPLFEGKTAWVLQSSIHNEDPNSDRVLTLGQHLIEGQTRW
        MIYFTERFLFGVRHLVVFYDRNQLREDGLSLLVEKPWTGSFADHWPRLDNSSILPRLSVEIPLFEGKTAWVLQSSIHNEDPNSDRVLTLGQHLIEGQTRW
Subjt:  MIYFTERFLFGVRHLVVFYDRNQLREDGLSLLVEKPWTGSFADHWPRLDNSSILPRLSVEIPLFEGKTAWVLQSSIHNEDPNSDRVLTLGQHLIEGQTRW

Query:  GTMTKVPREFCFTDCYWEWLELVVGRNARLLYSACLYDVVTTYFYTYDRNSD
        GTMTKVPREFCFTDCYWEWLELVVGRNARLLYSACLYDVVTTYFYTYDRNSD
Subjt:  GTMTKVPREFCFTDCYWEWLELVVGRNARLLYSACLYDVVTTYFYTYDRNSD

A0A5A7TX42 Uncharacterized protein1.2e-6981.58Show/hide
Query:  MIYFTERFLFGVRHLVVFYDRNQLREDGLSLLVEKPWTGSFADHWPRLDNSSILPRLSVEIPLFEGKTAWVLQSSIHNEDPNSDRVLTLGQHLIEGQTRW
        M+YFTERFL GVRHLV+  DRNQ REDGLSL+VEKPW G+FADHWPRLDN+S+LPRLSVE+PL EGK+AWVLQSSIHNE PNS R LTLGQ LIEGQTRW
Subjt:  MIYFTERFLFGVRHLVVFYDRNQLREDGLSLLVEKPWTGSFADHWPRLDNSSILPRLSVEIPLFEGKTAWVLQSSIHNEDPNSDRVLTLGQHLIEGQTRW

Query:  GTMTKVPREFCFTDCYWEWLELVVGRNARLLYSACLYDVVTTYFYTYDRNSD
        GT+TKVP EFCFTDCYWEWLELVVGRN RLLYS  LY  VT   YTYDRNSD
Subjt:  GTMTKVPREFCFTDCYWEWLELVVGRNARLLYSACLYDVVTTYFYTYDRNSD

A0A5A7U8L3 PMD domain-containing protein2.4e-7082.24Show/hide
Query:  MIYFTERFLFGVRHLVVFYDRNQLREDGLSLLVEKPWTGSFADHWPRLDNSSILPRLSVEIPLFEGKTAWVLQSSIHNEDPNSDRVLTLGQHLIEGQTRW
        M+YFTERFL GVRHLV+  DRNQ REDGLSL++EKPW G+FADHWPRLDN+S+LPRLSVEIPL EGK+AW+LQSSIHNE PNS R LTLGQ LIEGQTRW
Subjt:  MIYFTERFLFGVRHLVVFYDRNQLREDGLSLLVEKPWTGSFADHWPRLDNSSILPRLSVEIPLFEGKTAWVLQSSIHNEDPNSDRVLTLGQHLIEGQTRW

Query:  GTMTKVPREFCFTDCYWEWLELVVGRNARLLYSACLYDVVTTYFYTYDRNSD
        GTMTKVP EFCFTDCYWEWLELVVGRN RLLYS  LY  VTT  YTYDRNSD
Subjt:  GTMTKVPREFCFTDCYWEWLELVVGRNARLLYSACLYDVVTTYFYTYDRNSD

A0A5A7VHW8 PMD domain-containing protein7.1e-7081.58Show/hide
Query:  MIYFTERFLFGVRHLVVFYDRNQLREDGLSLLVEKPWTGSFADHWPRLDNSSILPRLSVEIPLFEGKTAWVLQSSIHNEDPNSDRVLTLGQHLIEGQTRW
        M+YFTERFL GVRHLV+  DRNQ REDGLSL+VEKPW G+FADHWPRLDN+S+LPRLSVEIPL EGK+AW+LQSSIH+E PNS R LTLGQ LIEGQTRW
Subjt:  MIYFTERFLFGVRHLVVFYDRNQLREDGLSLLVEKPWTGSFADHWPRLDNSSILPRLSVEIPLFEGKTAWVLQSSIHNEDPNSDRVLTLGQHLIEGQTRW

Query:  GTMTKVPREFCFTDCYWEWLELVVGRNARLLYSACLYDVVTTYFYTYDRNSD
        GT+TKVPREFCFTDCYWEWLELVVGRN RLLYS  LY  VT   YTYDRNSD
Subjt:  GTMTKVPREFCFTDCYWEWLELVVGRNARLLYSACLYDVVTTYFYTYDRNSD

A0A5D3DTH1 Putative mitochondrial protein8.3e-87100Show/hide
Query:  MIYFTERFLFGVRHLVVFYDRNQLREDGLSLLVEKPWTGSFADHWPRLDNSSILPRLSVEIPLFEGKTAWVLQSSIHNEDPNSDRVLTLGQHLIEGQTRW
        MIYFTERFLFGVRHLVVFYDRNQLREDGLSLLVEKPWTGSFADHWPRLDNSSILPRLSVEIPLFEGKTAWVLQSSIHNEDPNSDRVLTLGQHLIEGQTRW
Subjt:  MIYFTERFLFGVRHLVVFYDRNQLREDGLSLLVEKPWTGSFADHWPRLDNSSILPRLSVEIPLFEGKTAWVLQSSIHNEDPNSDRVLTLGQHLIEGQTRW

Query:  GTMTKVPREFCFTDCYWEWLELVVGRNARLLYSACLYDVVTTYFYTYDRNSD
        GTMTKVPREFCFTDCYWEWLELVVGRNARLLYSACLYDVVTTYFYTYDRNSD
Subjt:  GTMTKVPREFCFTDCYWEWLELVVGRNARLLYSACLYDVVTTYFYTYDRNSD

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGATTTACTTCACAGAACGATTCTTGTTTGGAGTCCGACACCTTGTAGTATTTTATGATAGAAATCAACTAAGAGAAGATGGACTTAGTCTCCTTGTGGAGAAGCCATG
GACTGGCTCTTTTGCAGATCATTGGCCACGCTTAGACAACAGCTCAATTCTTCCCAGATTGTCTGTGGAGATACCTTTATTTGAGGGAAAAACTGCATGGGTCCTACAGT
CTTCTATCCATAACGAGGATCCTAATTCTGACAGAGTTCTCACTCTCGGACAACATTTAATTGAAGGCCAAACACGTTGGGGCACTATGACCAAGGTCCCTAGAGAGTTC
TGCTTTACTGATTGCTATTGGGAGTGGCTAGAGCTTGTAGTTGGTCGAAATGCGCGACTTCTTTATAGTGCTTGTTTATATGATGTCGTAACAACTTATTTCTACACTTA
TGATCGTAATAGTGATTAG
mRNA sequenceShow/hide mRNA sequence
ATGATTTACTTCACAGAACGATTCTTGTTTGGAGTCCGACACCTTGTAGTATTTTATGATAGAAATCAACTAAGAGAAGATGGACTTAGTCTCCTTGTGGAGAAGCCATG
GACTGGCTCTTTTGCAGATCATTGGCCACGCTTAGACAACAGCTCAATTCTTCCCAGATTGTCTGTGGAGATACCTTTATTTGAGGGAAAAACTGCATGGGTCCTACAGT
CTTCTATCCATAACGAGGATCCTAATTCTGACAGAGTTCTCACTCTCGGACAACATTTAATTGAAGGCCAAACACGTTGGGGCACTATGACCAAGGTCCCTAGAGAGTTC
TGCTTTACTGATTGCTATTGGGAGTGGCTAGAGCTTGTAGTTGGTCGAAATGCGCGACTTCTTTATAGTGCTTGTTTATATGATGTCGTAACAACTTATTTCTACACTTA
TGATCGTAATAGTGATTAG
Protein sequenceShow/hide protein sequence
MIYFTERFLFGVRHLVVFYDRNQLREDGLSLLVEKPWTGSFADHWPRLDNSSILPRLSVEIPLFEGKTAWVLQSSIHNEDPNSDRVLTLGQHLIEGQTRWGTMTKVPREF
CFTDCYWEWLELVVGRNARLLYSACLYDVVTTYFYTYDRNSD