CuGenDBv2

Gene ID	IVF0018664
Organism	Cucumis melo ssp. agrestis cv. IVF77 (Melon (IVF77) v1)
Description	Protein FAM33A
Genome location	chr07:909185..913548
RNA-Seq Expression	IVF0018664
Synteny	IVF0018664
Gene Ontology terms	GO:0000278 - mitotic cell cycle (biological process) GO:0007059 - chromosome segregation (biological process) GO:0051301 - cell division (biological process) GO:0000940 - condensed chromosome outer kinetochore (cellular component) GO:0005737 - cytoplasm (cellular component) GO:0005876 - spindle microtubule (cellular component) GO:0008017 - microtubule binding (molecular function)
InterPro domains	IPR026762 - Spindle and kinetochore-associated protein 2 IPR042091 - Ska2, N-terminal

Homology

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GenBank top hits

e value

%identity

Alignment

KAG6591515.1 hypothetical protein SDJN03_13861, partial [Cucurbita argyrosperma subsp. sororia]

2.17e-73

85.93

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Query:  MGIDHHLHQHHQAADGLMNLFTKANLDLSVVQYRLEKEFQQIYPESANPMKLVSRIKKIQDDISTLKEQCREVLTAKQDVIDKARTVLLGNRNMLQKMQA
        MG+DH LHQHHQAADGL NLFTKAN DLSVVQYRLEKEFQQIYP+SANPMKL  RIKKI+DDISTLKEQCREVL AKQDVIDKARTVL+GNRNM+ KMQA
Subjt:  MGIDHHLHQHHQAADGLMNLFTKANLDLSVVQYRLEKEFQQIYPESANPMKLVSRIKKIQDDISTLKEQCREVLTAKQDVIDKARTVLLGNRNMLQKMQA

Query:  SMGIPFVSDLDDPALAEFKQITEEWTTQVQSKFGK
        SMG PFVSD DDPA  +FKQITEEWTTQVQSK G+
Subjt:  SMGIPFVSDLDDPALAEFKQITEEWTTQVQSKFGK

XP_004145489.1 spindle and kinetochore-associated protein 2 [Cucumis sativus]

1.44e-83

96.24

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Query:  MGIDHHLHQHHQAADGLMNLFTKANLDLSVVQYRLEKEFQQIYPESANPMKLVSRIKKIQDDISTLKEQCREVLTAKQDVIDKARTVLLGNRNMLQKMQA
        MGIDHHL QHHQAADGLMNLFTKANLDLSVVQYRLEKEFQQIYPESANPMKLVSRIKKIQDDISTLKEQCREVL AKQDVID+ARTVLLGNRNMLQKMQA
Subjt:  MGIDHHLHQHHQAADGLMNLFTKANLDLSVVQYRLEKEFQQIYPESANPMKLVSRIKKIQDDISTLKEQCREVLTAKQDVIDKARTVLLGNRNMLQKMQA

Query:  SMGIPFVSDLDDPALAEFKQITEEWTTQVQSKF
        SMGIPFVSDLDDPA +EFKQITEEWTTQVQSKF
Subjt:  SMGIPFVSDLDDPALAEFKQITEEWTTQVQSKF

XP_008452819.1 PREDICTED: spindle and kinetochore-associated protein 2 [Cucumis melo]

1.30e-88

99.26

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Query:  MGIDHHLHQHHQAADGLMNLFTKANLDLSVVQYRLEKEFQQIYPESANPMKLVSRIKKIQDDISTLKEQCREVLTAKQDVIDKARTVLLGNRNMLQKMQA
        MGIDHHLHQHHQAADGLMNLFTKANLDLSVVQYRLEKEFQQIYPESANPMKLVSRIKKIQDDISTLKEQCREVLTAKQDVIDKARTVLLGNRNMLQKMQA
Subjt:  MGIDHHLHQHHQAADGLMNLFTKANLDLSVVQYRLEKEFQQIYPESANPMKLVSRIKKIQDDISTLKEQCREVLTAKQDVIDKARTVLLGNRNMLQKMQA

Query:  SMGIPFVSDLDDPALAEFKQITEEWTTQVQSKFGK
        SMGIPFVSDLDDPALAEFKQITEEWTTQVQSKFG+
Subjt:  SMGIPFVSDLDDPALAEFKQITEEWTTQVQSKFGK

XP_022141272.1 spindle and kinetochore-associated protein 2 [Momordica charantia]

2.42e-75

88.06

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Query:  MGIDHHLHQHHQAADGLMNLFTKANLDLSVVQYRLEKEFQQIYPESANPMKLVSRIKKIQDDISTLKEQCREVLTAKQDVIDKARTVLLGNRNMLQKMQA
        MG+ HHLHQHHQAADGL NLFTKAN DLSVVQYRLEKEFQQIYP+SANPMKLVSRIKKI+DDISTL+EQCRE+L AKQDVIDKARTVL+GNRNMLQKMQA
Subjt:  MGIDHHLHQHHQAADGLMNLFTKANLDLSVVQYRLEKEFQQIYPESANPMKLVSRIKKIQDDISTLKEQCREVLTAKQDVIDKARTVLLGNRNMLQKMQA

Query:  SMGIPFVSDLDDPALAEFKQITEEWTTQVQSKFG
        SMGIP VSDLDD A A+FK+ITEEWTTQVQSK G
Subjt:  SMGIPFVSDLDDPALAEFKQITEEWTTQVQSKFG

XP_038898183.1 spindle and kinetochore-associated protein 2 [Benincasa hispida]

7.11e-79

87.32

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Query:  HLHQHHQAADGLMNLFTKANLDLSVVQYRLEKEFQQIYPESANPMKLVSRIKKIQDDISTLKEQCREVLTAKQDVIDKARTVLLGNRNMLQKMQASMGIP
        HLHQHHQAADGL NLFTKAN DLSVVQYRLEKEFQQIYPESANPMKLVSRIKKI+DDISTLKEQCREVL AKQDVIDKARTVL+GNRNMLQK+QASMG+P
Subjt:  HLHQHHQAADGLMNLFTKANLDLSVVQYRLEKEFQQIYPESANPMKLVSRIKKIQDDISTLKEQCREVLTAKQDVIDKARTVLLGNRNMLQKMQASMGIP

Query:  FVSDLDDPALAEFKQITEEWTTQVQSKFGK-GSFQAFYRILN
        FVSDLDDPA AEFKQITEEWT QVQSKFG+ G   A Y  +N
Subjt:  FVSDLDDPALAEFKQITEEWTTQVQSKFGK-GSFQAFYRILN

TrEMBL top hits

e value

%identity

Alignment

A0A0A0L5I9 Protein FAM33A

2.7e-64

96.24

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Query:  MGIDHHLHQHHQAADGLMNLFTKANLDLSVVQYRLEKEFQQIYPESANPMKLVSRIKKIQDDISTLKEQCREVLTAKQDVIDKARTVLLGNRNMLQKMQA
        MGIDHHL QHHQAADGLMNLFTKANLDLSVVQYRLEKEFQQIYPESANPMKLVSRIKKIQDDISTLKEQCREVL AKQDVID+ARTVLLGNRNMLQKMQA
Subjt:  MGIDHHLHQHHQAADGLMNLFTKANLDLSVVQYRLEKEFQQIYPESANPMKLVSRIKKIQDDISTLKEQCREVLTAKQDVIDKARTVLLGNRNMLQKMQA

Query:  SMGIPFVSDLDDPALAEFKQITEEWTTQVQSKF
        SMGIPFVSDLDDPA +EFKQITEEWTTQVQSKF
Subjt:  SMGIPFVSDLDDPALAEFKQITEEWTTQVQSKF

A0A1S3BUQ8 Protein FAM33A

4.1e-68

99.26

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Query:  MGIDHHLHQHHQAADGLMNLFTKANLDLSVVQYRLEKEFQQIYPESANPMKLVSRIKKIQDDISTLKEQCREVLTAKQDVIDKARTVLLGNRNMLQKMQA
        MGIDHHLHQHHQAADGLMNLFTKANLDLSVVQYRLEKEFQQIYPESANPMKLVSRIKKIQDDISTLKEQCREVLTAKQDVIDKARTVLLGNRNMLQKMQA
Subjt:  MGIDHHLHQHHQAADGLMNLFTKANLDLSVVQYRLEKEFQQIYPESANPMKLVSRIKKIQDDISTLKEQCREVLTAKQDVIDKARTVLLGNRNMLQKMQA

Query:  SMGIPFVSDLDDPALAEFKQITEEWTTQVQSKFGK
        SMGIPFVSDLDDPALAEFKQITEEWTTQVQSKFG+
Subjt:  SMGIPFVSDLDDPALAEFKQITEEWTTQVQSKFGK

A0A5A7VFB8 Protein FAM33A

4.1e-68

99.26

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Query:  MGIDHHLHQHHQAADGLMNLFTKANLDLSVVQYRLEKEFQQIYPESANPMKLVSRIKKIQDDISTLKEQCREVLTAKQDVIDKARTVLLGNRNMLQKMQA
        MGIDHHLHQHHQAADGLMNLFTKANLDLSVVQYRLEKEFQQIYPESANPMKLVSRIKKIQDDISTLKEQCREVLTAKQDVIDKARTVLLGNRNMLQKMQA
Subjt:  MGIDHHLHQHHQAADGLMNLFTKANLDLSVVQYRLEKEFQQIYPESANPMKLVSRIKKIQDDISTLKEQCREVLTAKQDVIDKARTVLLGNRNMLQKMQA

Query:  SMGIPFVSDLDDPALAEFKQITEEWTTQVQSKFGK
        SMGIPFVSDLDDPALAEFKQITEEWTTQVQSKFG+
Subjt:  SMGIPFVSDLDDPALAEFKQITEEWTTQVQSKFGK

A0A6J1CJF1 Protein FAM33A

5.0e-58

88.06

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Query:  MGIDHHLHQHHQAADGLMNLFTKANLDLSVVQYRLEKEFQQIYPESANPMKLVSRIKKIQDDISTLKEQCREVLTAKQDVIDKARTVLLGNRNMLQKMQA
        MG+ HHLHQHHQAADGL NLFTKAN DLSVVQYRLEKEFQQIYP+SANPMKLVSRIKKI+DDISTL+EQCRE+L AKQDVIDKARTVL+GNRNMLQKMQA
Subjt:  MGIDHHLHQHHQAADGLMNLFTKANLDLSVVQYRLEKEFQQIYPESANPMKLVSRIKKIQDDISTLKEQCREVLTAKQDVIDKARTVLLGNRNMLQKMQA

Query:  SMGIPFVSDLDDPALAEFKQITEEWTTQVQSKFG
        SMGIP VSDLDD A A+FK+ITEEWTTQVQSK G
Subjt:  SMGIPFVSDLDDPALAEFKQITEEWTTQVQSKFG

A0A6J1F6V9 Protein FAM33A

1.2e-56

85.93

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Query:  MGIDHHLHQHHQAADGLMNLFTKANLDLSVVQYRLEKEFQQIYPESANPMKLVSRIKKIQDDISTLKEQCREVLTAKQDVIDKARTVLLGNRNMLQKMQA
        MG+D HLHQHHQAADGL NLFTKAN DLSVVQYRLEKEFQQIYP+SANPMKL  RIKKI+DDISTLKEQCREVL AKQDVIDKARTVL+GNRNM+ KMQA
Subjt:  MGIDHHLHQHHQAADGLMNLFTKANLDLSVVQYRLEKEFQQIYPESANPMKLVSRIKKIQDDISTLKEQCREVLTAKQDVIDKARTVLLGNRNMLQKMQA

Query:  SMGIPFVSDLDDPALAEFKQITEEWTTQVQSKFGK
        SMG PFVSD DDPA  +FKQITEEWTTQVQSK G+
Subjt:  SMGIPFVSDLDDPALAEFKQITEEWTTQVQSKFGK

SwissProt top hits

e value

%identity

Alignment

Q4R8E8 Spindle and kinetochore-associated protein 2

6.8e-04

26.89

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Query:  DGLMNLFTKANLDLSVVQYRLEKEFQQIYPESA---NPMKLVSRIKKIQDDISTLKEQCREVLTAKQDVIDKARTVLLGNRNMLQKMQASMGIPFVSDLD
        D L  +F KA  DL  +QYRLE E +  +P+SA   NP+ L+  +  ++    TL  + + V   +++   +    +    N++QK+Q        +DL+
Subjt:  DGLMNLFTKANLDLSVVQYRLEKEFQQIYPESA---NPMKLVSRIKKIQDDISTLKEQCREVLTAKQDVIDKARTVLLGNRNMLQKMQASMGIPFVSDLD

Query:  -DPALAEFKQITEEWTTQV
          P   E K   E++ + +
Subjt:  -DPALAEFKQITEEWTTQV

Q8WVK7 Spindle and kinetochore-associated protein 2

2.3e-04

30.33

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Query:  DGLMNLFTKANLDLSVVQYRLEKEFQQIYPESA---NPMKLVSRIKKIQDDISTLKEQCREVLTAKQDVIDKARTVLLGNRNMLQKMQASMGIPFVSDLD
        D L  +F KA  DL  +QYRLE E +  +P+SA   NP+ L+  +  I+    TL  + + V   +++   +    +    NM+QK+Q        +DL+
Subjt:  DGLMNLFTKANLDLSVVQYRLEKEFQQIYPESA---NPMKLVSRIKKIQDDISTLKEQCREVLTAKQDVIDKARTVLLGNRNMLQKMQASMGIPFVSDLD

Query:  DPALAEFKQITEEWTTQVQSKF
           L +     EE T   Q KF
Subjt:  DPALAEFKQITEEWTTQVQSKF

Arabidopsis top hits

e value

%identity

Alignment

AT2G24970.1 unknown protein

4.8e-37

57.6

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Query:  HQHHQAADGLMNLFTKANLDLSVVQYRLEKEFQQIYPESANPMKLVSRIKKIQDDISTLKEQCREVLTAKQDVIDKARTVLLGNRNMLQKMQASMGIPFV
        + HHQA D L+N+F++A+ DL+VV  +L+KEFQQ+YP +ANPMKL+ RIKK+Q+D++ LK QC ++L+AKQD+IDKA+T L+GN N++QKM AS+G    
Subjt:  HQHHQAADGLMNLFTKANLDLSVVQYRLEKEFQQIYPESANPMKLVSRIKKIQDDISTLKEQCREVLTAKQDVIDKARTVLLGNRNMLQKMQASMGIPFV

Query:  SDLDDPALAEFKQITEEWTTQVQSK
         D DD ALA+F QI +EWT QV+S+
Subjt:  SDLDDPALAEFKQITEEWTTQVQSK

Sequences

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CDS sequence

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ATGGGGATCGATCATCATCTGCATCAACATCATCAAGCGGCCGATGGATTGATGAATTTGTTCACGAAGGCCAATCTCGATCTCTCAGTAGTTCAGTACAGGCTCGAGAA
GGAGTTTCAGCAAATCTATCCTGAAAGCGCGAATCCAATGAAGTTAGTTTCTAGGATAAAGAAGATACAGGATGATATATCAACATTGAAAGAGCAGTGTCGTGAAGTTT
TGACAGCTAAACAGGATGTAATCGATAAGGCGCGGACGGTTCTGCTTGGGAACAGAAACATGCTGCAAAAAATGCAAGCATCTATGGGCATACCCTTTGTTAGCGACCTC
GATGATCCTGCATTGGCGGAATTCAAGCAGATTACTGAGGAGTGGACAACACAAGTTCAATCAAAATTTGGTAAGGGTTCTTTTCAAGCTTTCTACAGAATTCTTAATTC
AAATTTCACTCATCCTAGTAAAAACTCAAGGCACAACCATTGA

mRNA sequence

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GAGAGCGCGAAAACCCTAGCGGAGAGAGAGTATGGGGATCGATCATCATCTGCATCAACATCATCAAGCGGCCGATGGATTGATGAATTTGTTCACGAAGGCCAATCTCG
ATCTCTCAGTAGTTCAGTACAGGCTCGAGAAGGAGTTTCAGCAAATCTATCCTGAAAGCGCGAATCCAATGAAGTTAGTTTCTAGGATAAAGAAGATACAGGATGATATA
TCAACATTGAAAGAGCAGTGTCGTGAAGTTTTGACAGCTAAACAGGATGTAATCGATAAGGCGCGGACGGTTCTGCTTGGGAACAGAAACATGCTGCAAAAAATGCAAGC
ATCTATGGGCATACCCTTTGTTAGCGACCTCGATGATCCTGCATTGGCGGAATTCAAGCAGATTACTGAGGAGTGGACAACACAAGTTCAATCAAAATTTGGTAAGGGTT
CTTTTCAAGCTTTCTACAGAATTCTTAATTCAAATTTCACTCATCCTAGTAAAAACTCAAGGCACAACCATTGAACCGTTGATTTTTCTTTTTTTTTTTTATTTATGTTC
TTTGTAACAATACGTGG

Protein sequence

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MGIDHHLHQHHQAADGLMNLFTKANLDLSVVQYRLEKEFQQIYPESANPMKLVSRIKKIQDDISTLKEQCREVLTAKQDVIDKARTVLLGNRNMLQKMQASMGIPFVSDL
DDPALAEFKQITEEWTTQVQSKFGKGSFQAFYRILNSNFTHPSKNSRHNH

IVF0018664 (gene) of Melon (IVF77) v1 genome