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IVF0018684 (gene) of Melon (IVF77) v1 genome

Gene IDIVF0018684
OrganismCucumis melo ssp. agrestis cv. IVF77 (Melon (IVF77) v1)
DescriptionReverse transcriptase
Genome locationchr09:14813861..14815307
RNA-Seq ExpressionIVF0018684
SyntenyIVF0018684
Gene Ontology termsGO:0090304 - nucleic acid metabolic process (biological process)
GO:0016740 - transferase activity (molecular function)
GO:0016787 - hydrolase activity (molecular function)
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0047209.1 ty3-gypsy retrotransposon protein [Cucumis melo var. makuwa]1.68e-0760Show/hide
Query:  HVIATRRHPAMAHLRPFFFFVSRARPTVGRLCLGRTVSATVHLVIDKGNHVVFSA
        H+I  + HPA A LRP FFFV  ARPT+ RLCLGR VS  VHL   K    VFSA
Subjt:  HVIATRRHPAMAHLRPFFFFVSRARPTVGRLCLGRTVSATVHLVIDKGNHVVFSA
KAA0048100.1 putative 22 kDa kafirin cluster [Cucumis melo var. makuwa]2.48e-0552.73Show/hide
Query:  HVIATRRHPAMA--------HLRPFFFFVSRARPTVGRLCLGRTVSATVHLVIDK
        H+   RR P  +        HL+P F F+ R RPT+ RLCLGRTVSA V LVIDK
Subjt:  HVIATRRHPAMA--------HLRPFFFFVSRARPTVGRLCLGRTVSATVHLVIDK
KAA0068152.1 hypothetical protein E6C27_scaffold238G001190 [Cucumis melo var. makuwa]1.25e-2675Show/hide
Query:  EKRQLSSPPIFIPLPFSVPRTVTSVHASYVVSHVIATRRHPAMAHLRPFFFFVSRARPTVGRLCLGRTVSATVHLVIDKG
        ++ +L SPPI IPLPFS P T   + ASY VS VIATRRHPAMAHL PFFFFVSRARPTV  LCLGR VSA VHLVIDKG
Subjt:  EKRQLSSPPIFIPLPFSVPRTVTSVHASYVVSHVIATRRHPAMAHLRPFFFFVSRARPTVGRLCLGRTVSATVHLVIDKG
TrEMBL top hitse value%identityAlignment
A0A5A7TY13 Putative 22 kDa kafirin cluster2.2e-0452.73Show/hide
Query:  HVIATRRHPAMA--------HLRPFFFFVSRARPTVGRLCLGRTVSATVHLVIDK
        H+   RR P  +        HL+P F F+ R RPT+ RLCLGRTVSA V LVIDK
Subjt:  HVIATRRHPAMA--------HLRPFFFFVSRARPTVGRLCLGRTVSATVHLVIDK
A0A5A7U149 Reverse transcriptase2.3e-0660Show/hide
Query:  HVIATRRHPAMAHLRPFFFFVSRARPTVGRLCLGRTVSATVHLVIDKGNHVVFSA
        H+I   +HPA A LRP FFFV  ARPT+ RLCLGR VS  VHL   K    VFSA
Subjt:  HVIATRRHPAMAHLRPFFFFVSRARPTVGRLCLGRTVSATVHLVIDKGNHVVFSA
A0A5A7VII9 Uncharacterized protein1.4e-2275Show/hide
Query:  EKRQLSSPPIFIPLPFSVPRTVTSVHASYVVSHVIATRRHPAMAHLRPFFFFVSRARPTVGRLCLGRTVSATVHLVIDKG
        ++ +L SPPI IPLPFS P T   + ASY VS VIATRRHPAMAHL PFFFFVSRARPTV  LCLGR VSA VHLVIDKG
Subjt:  EKRQLSSPPIFIPLPFSVPRTVTSVHASYVVSHVIATRRHPAMAHLRPFFFFVSRARPTVGRLCLGRTVSATVHLVIDKG
SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGCTTGGCTTGGGAGGCAACTTGGCTCAGACTCGGCTCGGCTCGGCTCGACTCAGTTCTCGACTCAGCTCGGCTCACGGCTTGGTTCAGCTCAGCTTGCAACTCTGTC
TGGCTCGTTTCGTGGCTCAGTTCACGGGTCGGATAAAAAGAGAGGATGGCTCGGAAGGTCGAAGGTGAAAGAAGAAAGCACGACGACGGCGACGACTAGGCGTACGCAAC
TGGACGAGGTCGGGGCGATCAATGGCCTTCGGATCTATGGATGGAAAAGGAAGACAGAAGGATTGGAGGCGGCGACGAATTCGAACGTACGAACGGAAGAAGTCGAACGA
TGGGCGGCTAGGCTTCAACTATTGCGGACGAACGAGGCAGCTCAGGTGGGGGCGTCGGAGAACCGCAGCTGCTGGAAGGTGGGGGCAGATGGCTTGCGCGGGCGAAGGAA
GAAGGAGAAAGAGAAACGCCAACTGTCGTCCCCTCCGATCTTCATTCCTCTTCCATTTAGCGTACCGCGCACCGTCACTTCCGTCCATGCCTCGTACGTCGTCAGCCACG
TAATAGCGACGCGAAGACATCCAGCGATGGCCCATCTCCGACCGTTTTTCTTCTTCGTTTCACGTGCACGACCAACCGTCGGCCGTCTCTGCCTCGGTCGTACAGTGTCA
GCCACCGTGCATCTTGTCATCGACAAAGGTAACCATGTAGTCTTCTCCGCTCACCGCCATCGTACGCTCGAAAACTAG
mRNA sequenceShow/hide mRNA sequence
ATGGCTTGGCTTGGGAGGCAACTTGGCTCAGACTCGGCTCGGCTCGGCTCGACTCAGTTCTCGACTCAGCTCGGCTCACGGCTTGGTTCAGCTCAGCTTGCAACTCTGTC
TGGCTCGTTTCGTGGCTCAGTTCACGGGTCGGATAAAAAGAGAGGATGGCTCGGAAGGTCGAAGGTGAAAGAAGAAAGCACGACGACGGCGACGACTAGGCGTACGCAAC
TGGACGAGGTCGGGGCGATCAATGGCCTTCGGATCTATGGATGGAAAAGGAAGACAGAAGGATTGGAGGCGGCGACGAATTCGAACGTACGAACGGAAGAAGTCGAACGA
TGGGCGGCTAGGCTTCAACTATTGCGGACGAACGAGGCAGCTCAGGTGGGGGCGTCGGAGAACCGCAGCTGCTGGAAGGTGGGGGCAGATGGCTTGCGCGGGCGAAGGAA
GAAGGAGAAAGAGAAACGCCAACTGTCGTCCCCTCCGATCTTCATTCCTCTTCCATTTAGCGTACCGCGCACCGTCACTTCCGTCCATGCCTCGTACGTCGTCAGCCACG
TAATAGCGACGCGAAGACATCCAGCGATGGCCCATCTCCGACCGTTTTTCTTCTTCGTTTCACGTGCACGACCAACCGTCGGCCGTCTCTGCCTCGGTCGTACAGTGTCA
GCCACCGTGCATCTTGTCATCGACAAAGGTAACCATGTAGTCTTCTCCGCTCACCGCCATCGTACGCTCGAAAACTAG
Protein sequenceShow/hide protein sequence
MAWLGRQLGSDSARLGSTQFSTQLGSRLGSAQLATLSGSFRGSVHGSDKKRGWLGRSKVKEESTTTATTRRTQLDEVGAINGLRIYGWKRKTEGLEAATNSNVRTEEVER
WAARLQLLRTNEAAQVGASENRSCWKVGADGLRGRRKKEKEKRQLSSPPIFIPLPFSVPRTVTSVHASYVVSHVIATRRHPAMAHLRPFFFFVSRARPTVGRLCLGRTVS
ATVHLVIDKGNHVVFSAHRHRTLEN