CuGenDBv2

Gene ID	IVF0018695
Organism	Cucumis melo ssp. agrestis cv. IVF77 (Melon (IVF77) v1)
Description	U3 small nucleolar RNA-associated protein 6 homolog
Genome location	chr08:2505827..2508885
RNA-Seq Expression	IVF0018695
Synteny	IVF0018695
Gene Ontology terms	GO:0000462 - maturation of SSU-rRNA from tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA) (biological process) GO:0032040 - small-subunit processome (cellular component) GO:0034388 - Pwp2p-containing subcomplex of 90S preribosome (cellular component) GO:0005515 - protein binding (molecular function) GO:0030515 - snoRNA binding (molecular function)
InterPro domains	IPR003107 - HAT (Half-A-TPR) repeat IPR011990 - Tetratricopeptide-like helical domain superfamily IPR013949 - U3 small nucleolar RNA-associated protein 6

Homology

Show/hide homology

GenBank top hits

e value

%identity

Alignment

XP_004134769.1 U3 small nucleolar RNA-associated protein 6 homolog [Cucumis sativus]

0.0

92.78

Show/hide

Query:  MADVVQFRLEGMVDELDDLEKRGLFSRREIAEIVKQRRKFEYRLKRPCPLKQDYLTYIDYEIQLDSLRHLRRKAVARELKKQGNKKMRISISDFAGVKRI
        MADVVQFRLEGMVDELDD EKRGLFSRREIAEIVKQRRKFEYRLKRPCPLKQDYLTYIDYEIQL+SLR LR+KAVARELKKQG+KKM+ SISDFAGVKRI
Subjt:  MADVVQFRLEGMVDELDDLEKRGLFSRREIAEIVKQRRKFEYRLKRPCPLKQDYLTYIDYEIQLDSLRHLRRKAVARELKKQGNKKMRISISDFAGVKRI

Query:  LYIYRLAVSRYKGDIDLWFRYLEFCRARKNGRMKKVLAQLIRFHPKVPGVWIYAAAWEFDHNINVDAARSLMLSGLRVCPTSEDLWIEYLRMELTYLNKL
        LYIYRLAV+RYKGDIDLWFRYLEFCRARKNG MKKVLAQLIRFHPKVPGVWIYAAAWEFDHNINVDAARSLMLSGLRVCPTSEDLWIEYLRMELTYLNKL
Subjt:  LYIYRLAVSRYKGDIDLWFRYLEFCRARKNGRMKKVLAQLIRFHPKVPGVWIYAAAWEFDHNINVDAARSLMLSGLRVCPTSEDLWIEYLRMELTYLNKL

Query:  KARKVALGEDEGSLVRENITAVEKQWREENKDLFMSMGETRGDSDGSSVETVSKNKLDLFREKGSNILETIYNGAIEALPSSFSLRKRVLEILEAMDLAH
        KARKVALGEDEGSLVRENITA EKQWREENKDLFMSMGETRGD+D S VET+SK+KLDLFREKGSN+LETIY+GAIEALPSSFSLRKRVLEILEAMDLAH
Subjt:  KARKVALGEDEGSLVRENITAVEKQWREENKDLFMSMGETRGDSDGSSVETVSKNKLDLFREKGSNILETIYNGAIEALPSSFSLRKRVLEILEAMDLAH

Query:  SEEMQSKILQDIKRDFASQPQYWDWLARLKYNPENVQGTSDIKEISRIEEAVKVYEEGLECMPSSALFSLYVKFLRSIIVPVKGEQTLGLSSHTENITSR
        SEEMQSKILQDIKRDFASQPQYWDWLARL  NPENVQGTSDIKEISRIE+AVKVYEEGLEC+PSSA+FSLYV+FLRSIIVPVKGEQTLGLSSHT+NITSR
Subjt:  SEEMQSKILQDIKRDFASQPQYWDWLARLKYNPENVQGTSDIKEISRIEEAVKVYEEGLECMPSSALFSLYVKFLRSIIVPVKGEQTLGLSSHTENITSR

Query:  LLMVYEKALTLGHITDDLACQYVF-----------TGLAQRLCSGKFSNSVKLWELRVSTEIKCSSKDSPSPSKNDLKSIFELTKEVLKKFSVSESGSLW
        LLMVYEKALTLGHITDDLACQYV              LA+RLCSGKFSNSVKLW LRVSTEIKC  KDSPSPSK+DLKSIFELTKEVLKKFSVSESGSLW
Subjt:  LLMVYEKALTLGHITDDLACQYVF-----------TGLAQRLCSGKFSNSVKLWELRVSTEIKCSSKDSPSPSKNDLKSIFELTKEVLKKFSVSESGSLW

Query:  LKVLKFFANQSYYFDKLVEISLLALAKSGGNEDGFSLSSVIVDFVLQKDGIQHTREVYKKFLGLPHPGLAMYQTCIQLESNLATAGDKDGLANARKLFES
        LKVLKFFANQSYYFDKLVEISL ALAKSGGNEDGFSLSSVIVDFVLQKDGIQ TREVYKKFLGLPHPGLAMYQTCIQLESNLATAGDKDGLANARKLFES
Subjt:  LKVLKFFANQSYYFDKLVEISLLALAKSGGNEDGFSLSSVIVDFVLQKDGIQHTREVYKKFLGLPHPGLAMYQTCIQLESNLATAGDKDGLANARKLFES

Query:  ALTTYGQNVSLWQEYYTLESKIGSSETAAAVRWRARKTLKDATALATSSDL
        AL TYGQNV LWQEYYTLESKIGSSETAAAVRWRARKTLKDATALATSSDL
Subjt:  ALTTYGQNVSLWQEYYTLESKIGSSETAAAVRWRARKTLKDATALATSSDL

XP_008440018.1 PREDICTED: U3 small nucleolar RNA-associated protein 6 homolog [Cucumis melo]

0.0

97.85

Show/hide

Query:  MADVVQFRLEGMVDELDDLEKRGLFSRREIAEIVKQRRKFEYRLKRPCPLKQDYLTYIDYEIQLDSLRHLRRKAVARELKKQGNKKMRISISDFAGVKRI
        MADVVQFRLEGMVDELDDLEKRGLFSRREIAEIVKQRRKFEYRLKRPCPLKQDYLTYIDYEIQLDSLRHLRRKAVARELKKQGNKKMRISISDFAGVKRI
Subjt:  MADVVQFRLEGMVDELDDLEKRGLFSRREIAEIVKQRRKFEYRLKRPCPLKQDYLTYIDYEIQLDSLRHLRRKAVARELKKQGNKKMRISISDFAGVKRI

Query:  LYIYRLAVSRYKGDIDLWFRYLEFCRARKNGRMKKVLAQLIRFHPKVPGVWIYAAAWEFDHNINVDAARSLMLSGLRVCPTSEDLWIEYLRMELTYLNKL
        LYIYRLAVSRYKGDIDLWFRYLEFCRARKNGRMKKVLAQLIRFHPKVPGVWIYAAAWEFDHNINVDAARSLMLSGLRVCPTSEDLWIEYLRMELTYLNKL
Subjt:  LYIYRLAVSRYKGDIDLWFRYLEFCRARKNGRMKKVLAQLIRFHPKVPGVWIYAAAWEFDHNINVDAARSLMLSGLRVCPTSEDLWIEYLRMELTYLNKL

Query:  KARKVALGEDEGSLVRENITAVEKQWREENKDLFMSMGETRGDSDGSSVETVSKNKLDLFREKGSNILETIYNGAIEALPSSFSLRKRVLEILEAMDLAH
        KARKVALGEDEGSLVRENITAVEKQWREENKDLFMSMGETRGDSDGSSVETVSKNKLDLFREKGSNILETIYNGAIEALPSSFSLRKRVLEILEAMDLAH
Subjt:  KARKVALGEDEGSLVRENITAVEKQWREENKDLFMSMGETRGDSDGSSVETVSKNKLDLFREKGSNILETIYNGAIEALPSSFSLRKRVLEILEAMDLAH

Query:  SEEMQSKILQDIKRDFASQPQYWDWLARLKYNPENVQGTSDIKEISRIEEAVKVYEEGLECMPSSALFSLYVKFLRSIIVPVKGEQTLGLSSHTENITSR
        SEEMQSKILQDIKRDFASQPQYWDWLARLKYNPENVQGTSDIKEISRIEEAVKVYEEGLECMPSSALFSLYVKFLRSIIVPVKGEQTLGLSSHTENITSR
Subjt:  SEEMQSKILQDIKRDFASQPQYWDWLARLKYNPENVQGTSDIKEISRIEEAVKVYEEGLECMPSSALFSLYVKFLRSIIVPVKGEQTLGLSSHTENITSR

Query:  LLMVYEKALTLGHITDDLACQYVF-----------TGLAQRLCSGKFSNSVKLWELRVSTEIKCSSKDSPSPSKNDLKSIFELTKEVLKKFSVSESGSLW
        LLMVYEKALTLGHITDDLACQYV              LAQRLCSGKFSNSVKLWELRVSTEIKCSSKDSPSPSKNDLKSIFELTKEVLKKFSVSESGSLW
Subjt:  LLMVYEKALTLGHITDDLACQYVF-----------TGLAQRLCSGKFSNSVKLWELRVSTEIKCSSKDSPSPSKNDLKSIFELTKEVLKKFSVSESGSLW

Query:  LKVLKFFANQSYYFDKLVEISLLALAKSGGNEDGFSLSSVIVDFVLQKDGIQHTREVYKKFLGLPHPGLAMYQTCIQLESNLATAGDKDGLANARKLFES
        LKVLKFFANQSYYFDKLVEISLLALAKSGGNEDGFSLSSVIVDFVLQKDGIQHTREVYKKFLGLPHPGLAMYQTCIQLESNLATAGDKDGLANARKLFES
Subjt:  LKVLKFFANQSYYFDKLVEISLLALAKSGGNEDGFSLSSVIVDFVLQKDGIQHTREVYKKFLGLPHPGLAMYQTCIQLESNLATAGDKDGLANARKLFES

Query:  ALTTYGQNVSLWQEYYTLESKIGSSETAAAVRWRARKTLKDATALATSSDL
        ALTTYGQNVSLWQEYYTLESKIGSSETAAAVRWRARKTLKDATALATSSDL
Subjt:  ALTTYGQNVSLWQEYYTLESKIGSSETAAAVRWRARKTLKDATALATSSDL

XP_022142158.1 U3 small nucleolar RNA-associated protein 6 homolog [Momordica charantia]

0.0

84.64

Show/hide

Query:  MADVVQFRLEGMVDELDDLEKRGLFSRREIAEIVKQRRKFEYRLKRPCPLKQDYLTYIDYEIQLDSLRHLRRKAVARELKKQGNKKMRISISDFAGVKRI
        MADVVQFRLEGMVDELDDLE+RGLFSRREIAEIVKQRRKFEYRLKRPCPLKQDYL Y+DYE  LDSLR+LR+KAVARELKKQGNKKMR SISDFAGVKRI
Subjt:  MADVVQFRLEGMVDELDDLEKRGLFSRREIAEIVKQRRKFEYRLKRPCPLKQDYLTYIDYEIQLDSLRHLRRKAVARELKKQGNKKMRISISDFAGVKRI

Query:  LYIYRLAVSRYKGDIDLWFRYLEFCRARKNGRMKKVLAQLIRFHPKVPGVWIYAAAWEFDHNINVDAARSLMLSGLRVCPTSEDLWIEYLRMELTYLNKL
        LYIYRLAV+RYKGDIDLWFRYLEFCR ++NGRMKKVLAQLIRFHPKVPGVWIYAAAWEFDHN NVDAARSLMLSGLRVCPTSEDLW+EYLRMELTYLNKL
Subjt:  LYIYRLAVSRYKGDIDLWFRYLEFCRARKNGRMKKVLAQLIRFHPKVPGVWIYAAAWEFDHNINVDAARSLMLSGLRVCPTSEDLWIEYLRMELTYLNKL

Query:  KARKVALGEDEGSLVRENITAVEKQWREENKDLFMSMGETRGDSDGSSVETVSKNKLDLFREKGSNILETIYNGAIEALPSSFSLRKRVLEILEAMDLAH
        KARKVALGED+GSLVREN  A EKQWREENKDLFMS+GE R ++DGS VET SK++LDLFRE+GSNILETIYNGAIEALPSSFSLRKRVLEILEAMDL+H
Subjt:  KARKVALGEDEGSLVRENITAVEKQWREENKDLFMSMGETRGDSDGSSVETVSKNKLDLFREKGSNILETIYNGAIEALPSSFSLRKRVLEILEAMDLAH

Query:  SEEMQSKILQDIKRDFASQPQYWDWLARLKYNPENVQGTSDIKEISRIEEAVKVYEEGLECMPSSALFSLYVKFLRSIIVPVKGEQTLGLSSHTENITSR
        SEEM SKILQD+KRDF +QPQYWDWLARL+ NPENVQG SD KEIS+IE+AV+VYEE LEC+PSS +FSLYV+FL +II PVKG+ T GLSS+T NITSR
Subjt:  SEEMQSKILQDIKRDFASQPQYWDWLARLKYNPENVQGTSDIKEISRIEEAVKVYEEGLECMPSSALFSLYVKFLRSIIVPVKGEQTLGLSSHTENITSR

Query:  LLMVYEKALTLGHITDDLACQYVF-----------TGLAQRLCSGKFSNSVKLWELRVSTEIKCSSKDSPSPSKNDLKSIFELTKEVLKKFSVSESGSLW
        LL+VYEKALTLGHIT+DL CQYV              LA+RLCSGK SNSVKLW LRVS EIKC  KDSPSPSK+D+KSIFELTK+VL+ FSVSES SLW
Subjt:  LLMVYEKALTLGHITDDLACQYVF-----------TGLAQRLCSGKFSNSVKLWELRVSTEIKCSSKDSPSPSKNDLKSIFELTKEVLKKFSVSESGSLW

Query:  LKVLKFFANQSYYFDKLVEISLLALAKSGGNEDGFSLSSVIVDFVLQKDGIQHTREVYKKFLGLPHPGLAMYQTCIQLESNLATAGDKDGLANARKLFES
        L VL FFANQSYYFDKL+EISLLALAK GG+EDGFSLSS IVDFVLQKDGIQ TREVYKKFLGLPHPG AMY+TCIQLESNLA+AGDKDGLANARKLFES
Subjt:  LKVLKFFANQSYYFDKLVEISLLALAKSGGNEDGFSLSSVIVDFVLQKDGIQHTREVYKKFLGLPHPGLAMYQTCIQLESNLATAGDKDGLANARKLFES

Query:  ALTTYGQNVSLWQEYYTLESKIGSSETAAAVRWRARKTLKDATALATSSDL
        ALTTY Q+VSLWQEY  +E+KIGSSETAAA+RWRARKTLKDATAL TSSDL
Subjt:  ALTTYGQNVSLWQEYYTLESKIGSSETAAAVRWRARKTLKDATALATSSDL

XP_023517938.1 U3 small nucleolar RNA-associated protein 6 homolog [Cucurbita pepo subsp. pepo]

0.0

85.1

Show/hide

Query:  MADVVQFRLEGMVDELDDLEKRGLFSRREIAEIVKQRRKFEYRLKRPCPLKQDYLTYIDYEIQLDSLRHLRRKAVARELKKQGNKKMRISISDFAGVKRI
        MADVVQFRLEGM+DELDDLE+RGLFSRREIAEIVKQRRKFEYRLKRPCPLKQDY+ YIDYE  LDSLR LR+KAV+RELKKQGNKKMR S SDFA VKRI
Subjt:  MADVVQFRLEGMVDELDDLEKRGLFSRREIAEIVKQRRKFEYRLKRPCPLKQDYLTYIDYEIQLDSLRHLRRKAVARELKKQGNKKMRISISDFAGVKRI

Query:  LYIYRLAVSRYKGDIDLWFRYLEFCRARKNGRMKKVLAQLIRFHPKVPGVWIYAAAWEFDHNINVDAARSLMLSGLRVCPTSEDLWIEYLRMELTYLNKL
        LYIYRLAVSRYKGDIDLWFRYLEFCRA+KNGRMKKVLAQLIRFHPKVPGVWIYAAAWEFDH+ NVDAARSLMLSGLRVCPTSEDLW+EYLRMELTYLNKL
Subjt:  LYIYRLAVSRYKGDIDLWFRYLEFCRARKNGRMKKVLAQLIRFHPKVPGVWIYAAAWEFDHNINVDAARSLMLSGLRVCPTSEDLWIEYLRMELTYLNKL

Query:  KARKVALGEDEGSLVRENITAVEKQWREENKDLFMSMGETRGDSDGSSVETVSKNKLDLFREKGSNILETIYNGAIEALPSSFSLRKRVLEILEAMDLAH
        KARKVALGEDEGSLVREN  A +KQWREENKDLFMS+GE R D+DGS  ET SKNKLDLFRE+GSNILETIYNGAIEALPSSFSLRKRVLEILEAMDLAH
Subjt:  KARKVALGEDEGSLVRENITAVEKQWREENKDLFMSMGETRGDSDGSSVETVSKNKLDLFREKGSNILETIYNGAIEALPSSFSLRKRVLEILEAMDLAH

Query:  SEEMQSKILQDIKRDFASQPQYWDWLARLKYNPENVQGTSDIKEISRIEEAVKVYEEGLECMPSSALFSLYVKFLRSIIVPVKGEQTLGLSSHTENITSR
        SEE+ SKILQDIKRDF ++PQYWDWLARL+YNP++VQG SD KE SRIE+AV+VYEEGLE +PSSA+FSLYV+FL ++I  VKGEQ+ GLSS T N TSR
Subjt:  SEEMQSKILQDIKRDFASQPQYWDWLARLKYNPENVQGTSDIKEISRIEEAVKVYEEGLECMPSSALFSLYVKFLRSIIVPVKGEQTLGLSSHTENITSR

Query:  LLMVYEKALTLGHITDDLACQYVF-----------TGLAQRLCSGKFSNSVKLWELRVSTEIKCSSKDSPSPSKNDLKSIFELTKEVLKKFSVSESGSLW
        LLMVYEKALTLGHITDDLACQYV              LA+RLCSGK SNSVKLW LRVSTEIK   KDSPSPSK+DL SIFELTKE+L+ FSVSESGSLW
Subjt:  LLMVYEKALTLGHITDDLACQYVF-----------TGLAQRLCSGKFSNSVKLWELRVSTEIKCSSKDSPSPSKNDLKSIFELTKEVLKKFSVSESGSLW

Query:  LKVLKFFANQSYYFDKLVEISLLALAKSGGNEDGFSLSSVIVDFVLQKDGIQHTREVYKKFLGLPHPGLAMYQTCIQLESNLATAGDKDGLANARKLFES
        L VLKFFANQS+YFD+LVEISLLALAKSGG+EDGFSLSS IVDFVLQKDGIQ TREVYKKFLGLPHPGLA+Y+TCIQLESNLA+AGDK+GLA+ARKLFES
Subjt:  LKVLKFFANQSYYFDKLVEISLLALAKSGGNEDGFSLSSVIVDFVLQKDGIQHTREVYKKFLGLPHPGLAMYQTCIQLESNLATAGDKDGLANARKLFES

Query:  ALTTYGQNVSLWQEYYTLESKIGSSETAAAVRWRARKTLKDATALATSSDL
        AL TYGQ+VSLWQEYY +ESK+GSSETAAA+RWRARKTLKDATALATSSDL
Subjt:  ALTTYGQNVSLWQEYYTLESKIGSSETAAAVRWRARKTLKDATALATSSDL

XP_038883020.1 U3 small nucleolar RNA-associated protein 6 homolog [Benincasa hispida]

0.0

88.96

Show/hide

Query:  MADVVQFRLEGMVDELDDLEKRGLFSRREIAEIVKQRRKFEYRLKRPCPLKQDYLTYIDYEIQLDSLRHLRRKAVARELKKQGNKKMRISISDFAGVKRI
        MADVVQFRLE MVDELDDLE+RGLFSRREIAEIVKQRRKFEYRLKRPCPLKQDYL YIDYEI L+SLRHLR+KAVARELKKQGNKKMR SISDFAGVKRI
Subjt:  MADVVQFRLEGMVDELDDLEKRGLFSRREIAEIVKQRRKFEYRLKRPCPLKQDYLTYIDYEIQLDSLRHLRRKAVARELKKQGNKKMRISISDFAGVKRI

Query:  LYIYRLAVSRYKGDIDLWFRYLEFCRARKNGRMKKVLAQLIRFHPKVPGVWIYAAAWEFDHNINVDAARSLMLSGLRVCPTSEDLWIEYLRMELTYLNKL
        LYIYRLAV+RYKGDIDLWFRYLEFCRARKNGRMKKVLAQLIRFHPKVPGVWIYAAAWEFDHN NVDAARSLMLSGLRVCPTSEDLW+EYLRMELTYLNKL
Subjt:  LYIYRLAVSRYKGDIDLWFRYLEFCRARKNGRMKKVLAQLIRFHPKVPGVWIYAAAWEFDHNINVDAARSLMLSGLRVCPTSEDLWIEYLRMELTYLNKL

Query:  KARKVALGEDEGSLVRENITAVEKQWREENKDLFMSMGETRGDSDGSSVETVSKNKLDLFREKGSNILETIYNGAIEALPSSFSLRKRVLEILEAMDLAH
        KARKVALGEDEGSLVREN+ A EKQWREE+KDLFM MGE R D+DGS VET SKNKLDLFRE+GSNILETIYNGAIEALPSSFSLRKRVLEILEAMDLAH
Subjt:  KARKVALGEDEGSLVRENITAVEKQWREENKDLFMSMGETRGDSDGSSVETVSKNKLDLFREKGSNILETIYNGAIEALPSSFSLRKRVLEILEAMDLAH

Query:  SEEMQSKILQDIKRDFASQPQYWDWLARLKYNPENVQGTSDIKEISRIEEAVKVYEEGLECMPSSALFSLYVKFLRSIIVPVKGEQTLGLSSHTENITSR
        SEEMQSKILQDIKRDF ++PQYWDWLARL+YNPEN+QG S IKEISRIE+AV+VYEEGLEC+PSS +FSLYVKFL  +I PVKGE+T GLS+HTENITSR
Subjt:  SEEMQSKILQDIKRDFASQPQYWDWLARLKYNPENVQGTSDIKEISRIEEAVKVYEEGLECMPSSALFSLYVKFLRSIIVPVKGEQTLGLSSHTENITSR

Query:  LLMVYEKALTLGHITDDLACQYVF-----------TGLAQRLCSGKFSNSVKLWELRVSTEIKCSSKDSPSPSKNDLKSIFELTKEVLKKFSVSESGSLW
        LLMVYEKALTLGHITDDLACQYV              LA+RLCSG+FSNSVKLW LRVSTEIKC SKDSPSPSK+DLK IFELTKEVLK FSVSESGSLW
Subjt:  LLMVYEKALTLGHITDDLACQYVF-----------TGLAQRLCSGKFSNSVKLWELRVSTEIKCSSKDSPSPSKNDLKSIFELTKEVLKKFSVSESGSLW

Query:  LKVLKFFANQSYYFDKLVEISLLALAKSGGNEDGFSLSSVIVDFVLQKDGIQHTREVYKKFLGLPHPGLAMYQTCIQLESNLATAGDKDGLANARKLFES
        L VLKFFANQSYYFDKLVEISLLALAKSGGNEDGFSLSS IVDFVLQKDGIQ TREVYKKFLGLPHPGLAMYQTCIQLESNLA+ GDKDGLANARKLFES
Subjt:  LKVLKFFANQSYYFDKLVEISLLALAKSGGNEDGFSLSSVIVDFVLQKDGIQHTREVYKKFLGLPHPGLAMYQTCIQLESNLATAGDKDGLANARKLFES

Query:  ALTTYGQN-VSLWQEYYTLESKIGSSETAAAVRWRARKTLKDATALATSSDL
        ALTTYG + VSLWQEYYT+ESKIGSSETAAA+RWRARKTLKDATAL TSSDL
Subjt:  ALTTYGQN-VSLWQEYYTLESKIGSSETAAAVRWRARKTLKDATALATSSDL

TrEMBL top hits

e value

%identity

Alignment

A0A0A0KJV9 Uncharacterized protein

0.0e+00

92.78

Show/hide

Query:  MADVVQFRLEGMVDELDDLEKRGLFSRREIAEIVKQRRKFEYRLKRPCPLKQDYLTYIDYEIQLDSLRHLRRKAVARELKKQGNKKMRISISDFAGVKRI
        MADVVQFRLEGMVDELDD EKRGLFSRREIAEIVKQRRKFEYRLKRPCPLKQDYLTYIDYEIQL+SLR LR+KAVARELKKQG+KKM+ SISDFAGVKRI
Subjt:  MADVVQFRLEGMVDELDDLEKRGLFSRREIAEIVKQRRKFEYRLKRPCPLKQDYLTYIDYEIQLDSLRHLRRKAVARELKKQGNKKMRISISDFAGVKRI

Query:  LYIYRLAVSRYKGDIDLWFRYLEFCRARKNGRMKKVLAQLIRFHPKVPGVWIYAAAWEFDHNINVDAARSLMLSGLRVCPTSEDLWIEYLRMELTYLNKL
        LYIYRLAV+RYKGDIDLWFRYLEFCRARKNG MKKVLAQLIRFHPKVPGVWIYAAAWEFDHNINVDAARSLMLSGLRVCPTSEDLWIEYLRMELTYLNKL
Subjt:  LYIYRLAVSRYKGDIDLWFRYLEFCRARKNGRMKKVLAQLIRFHPKVPGVWIYAAAWEFDHNINVDAARSLMLSGLRVCPTSEDLWIEYLRMELTYLNKL

Query:  KARKVALGEDEGSLVRENITAVEKQWREENKDLFMSMGETRGDSDGSSVETVSKNKLDLFREKGSNILETIYNGAIEALPSSFSLRKRVLEILEAMDLAH
        KARKVALGEDEGSLVRENITA EKQWREENKDLFMSMGETRGD+D S VET+SK+KLDLFREKGSN+LETIY+GAIEALPSSFSLRKRVLEILEAMDLAH
Subjt:  KARKVALGEDEGSLVRENITAVEKQWREENKDLFMSMGETRGDSDGSSVETVSKNKLDLFREKGSNILETIYNGAIEALPSSFSLRKRVLEILEAMDLAH

Query:  SEEMQSKILQDIKRDFASQPQYWDWLARLKYNPENVQGTSDIKEISRIEEAVKVYEEGLECMPSSALFSLYVKFLRSIIVPVKGEQTLGLSSHTENITSR
        SEEMQSKILQDIKRDFASQPQYWDWLARL  NPENVQGTSDIKEISRIE+AVKVYEEGLEC+PSSA+FSLYV+FLRSIIVPVKGEQTLGLSSHT+NITSR
Subjt:  SEEMQSKILQDIKRDFASQPQYWDWLARLKYNPENVQGTSDIKEISRIEEAVKVYEEGLECMPSSALFSLYVKFLRSIIVPVKGEQTLGLSSHTENITSR

Query:  LLMVYEKALTLGHITDDLACQYVF-----------TGLAQRLCSGKFSNSVKLWELRVSTEIKCSSKDSPSPSKNDLKSIFELTKEVLKKFSVSESGSLW
        LLMVYEKALTLGHITDDLACQYV              LA+RLCSGKFSNSVKLW LRVSTEIKC  KDSPSPSK+DLKSIFELTKEVLKKFSVSESGSLW
Subjt:  LLMVYEKALTLGHITDDLACQYVF-----------TGLAQRLCSGKFSNSVKLWELRVSTEIKCSSKDSPSPSKNDLKSIFELTKEVLKKFSVSESGSLW

Query:  LKVLKFFANQSYYFDKLVEISLLALAKSGGNEDGFSLSSVIVDFVLQKDGIQHTREVYKKFLGLPHPGLAMYQTCIQLESNLATAGDKDGLANARKLFES
        LKVLKFFANQSYYFDKLVEISL ALAKSGGNEDGFSLSSVIVDFVLQKDGIQ TREVYKKFLGLPHPGLAMYQTCIQLESNLATAGDKDGLANARKLFES
Subjt:  LKVLKFFANQSYYFDKLVEISLLALAKSGGNEDGFSLSSVIVDFVLQKDGIQHTREVYKKFLGLPHPGLAMYQTCIQLESNLATAGDKDGLANARKLFES

Query:  ALTTYGQNVSLWQEYYTLESKIGSSETAAAVRWRARKTLKDATALATSSDL
        AL TYGQNV LWQEYYTLESKIGSSETAAAVRWRARKTLKDATALATSSDL
Subjt:  ALTTYGQNVSLWQEYYTLESKIGSSETAAAVRWRARKTLKDATALATSSDL

A0A1S3B0R2 U3 small nucleolar RNA-associated protein 6 homolog

0.0e+00

97.85

Show/hide

Query:  MADVVQFRLEGMVDELDDLEKRGLFSRREIAEIVKQRRKFEYRLKRPCPLKQDYLTYIDYEIQLDSLRHLRRKAVARELKKQGNKKMRISISDFAGVKRI
        MADVVQFRLEGMVDELDDLEKRGLFSRREIAEIVKQRRKFEYRLKRPCPLKQDYLTYIDYEIQLDSLRHLRRKAVARELKKQGNKKMRISISDFAGVKRI
Subjt:  MADVVQFRLEGMVDELDDLEKRGLFSRREIAEIVKQRRKFEYRLKRPCPLKQDYLTYIDYEIQLDSLRHLRRKAVARELKKQGNKKMRISISDFAGVKRI

Query:  LYIYRLAVSRYKGDIDLWFRYLEFCRARKNGRMKKVLAQLIRFHPKVPGVWIYAAAWEFDHNINVDAARSLMLSGLRVCPTSEDLWIEYLRMELTYLNKL
        LYIYRLAVSRYKGDIDLWFRYLEFCRARKNGRMKKVLAQLIRFHPKVPGVWIYAAAWEFDHNINVDAARSLMLSGLRVCPTSEDLWIEYLRMELTYLNKL
Subjt:  LYIYRLAVSRYKGDIDLWFRYLEFCRARKNGRMKKVLAQLIRFHPKVPGVWIYAAAWEFDHNINVDAARSLMLSGLRVCPTSEDLWIEYLRMELTYLNKL

Query:  KARKVALGEDEGSLVRENITAVEKQWREENKDLFMSMGETRGDSDGSSVETVSKNKLDLFREKGSNILETIYNGAIEALPSSFSLRKRVLEILEAMDLAH
        KARKVALGEDEGSLVRENITAVEKQWREENKDLFMSMGETRGDSDGSSVETVSKNKLDLFREKGSNILETIYNGAIEALPSSFSLRKRVLEILEAMDLAH
Subjt:  KARKVALGEDEGSLVRENITAVEKQWREENKDLFMSMGETRGDSDGSSVETVSKNKLDLFREKGSNILETIYNGAIEALPSSFSLRKRVLEILEAMDLAH

Query:  SEEMQSKILQDIKRDFASQPQYWDWLARLKYNPENVQGTSDIKEISRIEEAVKVYEEGLECMPSSALFSLYVKFLRSIIVPVKGEQTLGLSSHTENITSR
        SEEMQSKILQDIKRDFASQPQYWDWLARLKYNPENVQGTSDIKEISRIEEAVKVYEEGLECMPSSALFSLYVKFLRSIIVPVKGEQTLGLSSHTENITSR
Subjt:  SEEMQSKILQDIKRDFASQPQYWDWLARLKYNPENVQGTSDIKEISRIEEAVKVYEEGLECMPSSALFSLYVKFLRSIIVPVKGEQTLGLSSHTENITSR

Query:  LLMVYEKALTLGHITDDLACQYVF-----------TGLAQRLCSGKFSNSVKLWELRVSTEIKCSSKDSPSPSKNDLKSIFELTKEVLKKFSVSESGSLW
        LLMVYEKALTLGHITDDLACQYV              LAQRLCSGKFSNSVKLWELRVSTEIKCSSKDSPSPSKNDLKSIFELTKEVLKKFSVSESGSLW
Subjt:  LLMVYEKALTLGHITDDLACQYVF-----------TGLAQRLCSGKFSNSVKLWELRVSTEIKCSSKDSPSPSKNDLKSIFELTKEVLKKFSVSESGSLW

Query:  LKVLKFFANQSYYFDKLVEISLLALAKSGGNEDGFSLSSVIVDFVLQKDGIQHTREVYKKFLGLPHPGLAMYQTCIQLESNLATAGDKDGLANARKLFES
        LKVLKFFANQSYYFDKLVEISLLALAKSGGNEDGFSLSSVIVDFVLQKDGIQHTREVYKKFLGLPHPGLAMYQTCIQLESNLATAGDKDGLANARKLFES
Subjt:  LKVLKFFANQSYYFDKLVEISLLALAKSGGNEDGFSLSSVIVDFVLQKDGIQHTREVYKKFLGLPHPGLAMYQTCIQLESNLATAGDKDGLANARKLFES

Query:  ALTTYGQNVSLWQEYYTLESKIGSSETAAAVRWRARKTLKDATALATSSDL
        ALTTYGQNVSLWQEYYTLESKIGSSETAAAVRWRARKTLKDATALATSSDL
Subjt:  ALTTYGQNVSLWQEYYTLESKIGSSETAAAVRWRARKTLKDATALATSSDL

A0A5D3CNA4 U3 small nucleolar RNA-associated protein 6-like protein

0.0e+00

97.85

Show/hide

Query:  MADVVQFRLEGMVDELDDLEKRGLFSRREIAEIVKQRRKFEYRLKRPCPLKQDYLTYIDYEIQLDSLRHLRRKAVARELKKQGNKKMRISISDFAGVKRI
        MADVVQFRLEGMVDELDDLEKRGLFSRREIAEIVKQRRKFEYRLKRPCPLKQDYLTYIDYEIQLDSLRHLRRKAVARELKKQGNKKMRISISDFAGVKRI
Subjt:  MADVVQFRLEGMVDELDDLEKRGLFSRREIAEIVKQRRKFEYRLKRPCPLKQDYLTYIDYEIQLDSLRHLRRKAVARELKKQGNKKMRISISDFAGVKRI

Query:  LYIYRLAVSRYKGDIDLWFRYLEFCRARKNGRMKKVLAQLIRFHPKVPGVWIYAAAWEFDHNINVDAARSLMLSGLRVCPTSEDLWIEYLRMELTYLNKL
        LYIYRLAVSRYKGDIDLWFRYLEFCRARKNGRMKKVLAQLIRFHPKVPGVWIYAAAWEFDHNINVDAARSLMLSGLRVCPTSEDLWIEYLRMELTYLNKL
Subjt:  LYIYRLAVSRYKGDIDLWFRYLEFCRARKNGRMKKVLAQLIRFHPKVPGVWIYAAAWEFDHNINVDAARSLMLSGLRVCPTSEDLWIEYLRMELTYLNKL

Query:  KARKVALGEDEGSLVRENITAVEKQWREENKDLFMSMGETRGDSDGSSVETVSKNKLDLFREKGSNILETIYNGAIEALPSSFSLRKRVLEILEAMDLAH
        KARKVALGEDEGSLVRENITAVEKQWREENKDLFMSMGETRGDSDGSSVETVSKNKLDLFREKGSNILETIYNGAIEALPSSFSLRKRVLEILEAMDLAH
Subjt:  KARKVALGEDEGSLVRENITAVEKQWREENKDLFMSMGETRGDSDGSSVETVSKNKLDLFREKGSNILETIYNGAIEALPSSFSLRKRVLEILEAMDLAH

Query:  SEEMQSKILQDIKRDFASQPQYWDWLARLKYNPENVQGTSDIKEISRIEEAVKVYEEGLECMPSSALFSLYVKFLRSIIVPVKGEQTLGLSSHTENITSR
        SEEMQSKILQDIKRDFASQPQYWDWLARLKYNPENVQGTSDIKEISRIEEAVKVYEEGLECMPSSALFSLYVKFLRSIIVPVKGEQTLGLSSHTENITSR
Subjt:  SEEMQSKILQDIKRDFASQPQYWDWLARLKYNPENVQGTSDIKEISRIEEAVKVYEEGLECMPSSALFSLYVKFLRSIIVPVKGEQTLGLSSHTENITSR

Query:  LLMVYEKALTLGHITDDLACQYVF-----------TGLAQRLCSGKFSNSVKLWELRVSTEIKCSSKDSPSPSKNDLKSIFELTKEVLKKFSVSESGSLW
        LLMVYEKALTLGHITDDLACQYV              LAQRLCSGKFSNSVKLWELRVSTEIKCSSKDSPSPSKNDLKSIFELTKEVLKKFSVSESGSLW
Subjt:  LLMVYEKALTLGHITDDLACQYVF-----------TGLAQRLCSGKFSNSVKLWELRVSTEIKCSSKDSPSPSKNDLKSIFELTKEVLKKFSVSESGSLW

Query:  LKVLKFFANQSYYFDKLVEISLLALAKSGGNEDGFSLSSVIVDFVLQKDGIQHTREVYKKFLGLPHPGLAMYQTCIQLESNLATAGDKDGLANARKLFES
        LKVLKFFANQSYYFDKLVEISLLALAKSGGNEDGFSLSSVIVDFVLQKDGIQHTREVYKKFLGLPHPGLAMYQTCIQLESNLATAGDKDGLANARKLFES
Subjt:  LKVLKFFANQSYYFDKLVEISLLALAKSGGNEDGFSLSSVIVDFVLQKDGIQHTREVYKKFLGLPHPGLAMYQTCIQLESNLATAGDKDGLANARKLFES

Query:  ALTTYGQNVSLWQEYYTLESKIGSSETAAAVRWRARKTLKDATALATSSDL
        ALTTYGQNVSLWQEYYTLESKIGSSETAAAVRWRARKTLKDATALATSSDL
Subjt:  ALTTYGQNVSLWQEYYTLESKIGSSETAAAVRWRARKTLKDATALATSSDL

A0A6J1CMJ8 U3 small nucleolar RNA-associated protein 6 homolog

0.0e+00

84.64

Show/hide

Query:  MADVVQFRLEGMVDELDDLEKRGLFSRREIAEIVKQRRKFEYRLKRPCPLKQDYLTYIDYEIQLDSLRHLRRKAVARELKKQGNKKMRISISDFAGVKRI
        MADVVQFRLEGMVDELDDLE+RGLFSRREIAEIVKQRRKFEYRLKRPCPLKQDYL Y+DYE  LDSLR+LR+KAVARELKKQGNKKMR SISDFAGVKRI
Subjt:  MADVVQFRLEGMVDELDDLEKRGLFSRREIAEIVKQRRKFEYRLKRPCPLKQDYLTYIDYEIQLDSLRHLRRKAVARELKKQGNKKMRISISDFAGVKRI

Query:  LYIYRLAVSRYKGDIDLWFRYLEFCRARKNGRMKKVLAQLIRFHPKVPGVWIYAAAWEFDHNINVDAARSLMLSGLRVCPTSEDLWIEYLRMELTYLNKL
        LYIYRLAV+RYKGDIDLWFRYLEFCR ++NGRMKKVLAQLIRFHPKVPGVWIYAAAWEFDHN NVDAARSLMLSGLRVCPTSEDLW+EYLRMELTYLNKL
Subjt:  LYIYRLAVSRYKGDIDLWFRYLEFCRARKNGRMKKVLAQLIRFHPKVPGVWIYAAAWEFDHNINVDAARSLMLSGLRVCPTSEDLWIEYLRMELTYLNKL

Query:  KARKVALGEDEGSLVRENITAVEKQWREENKDLFMSMGETRGDSDGSSVETVSKNKLDLFREKGSNILETIYNGAIEALPSSFSLRKRVLEILEAMDLAH
        KARKVALGED+GSLVREN  A EKQWREENKDLFMS+GE R ++DGS VET SK++LDLFRE+GSNILETIYNGAIEALPSSFSLRKRVLEILEAMDL+H
Subjt:  KARKVALGEDEGSLVRENITAVEKQWREENKDLFMSMGETRGDSDGSSVETVSKNKLDLFREKGSNILETIYNGAIEALPSSFSLRKRVLEILEAMDLAH

Query:  SEEMQSKILQDIKRDFASQPQYWDWLARLKYNPENVQGTSDIKEISRIEEAVKVYEEGLECMPSSALFSLYVKFLRSIIVPVKGEQTLGLSSHTENITSR
        SEEM SKILQD+KRDF +QPQYWDWLARL+ NPENVQG SD KEIS+IE+AV+VYEE LEC+PSS +FSLYV+FL +II PVKG+ T GLSS+T NITSR
Subjt:  SEEMQSKILQDIKRDFASQPQYWDWLARLKYNPENVQGTSDIKEISRIEEAVKVYEEGLECMPSSALFSLYVKFLRSIIVPVKGEQTLGLSSHTENITSR

Query:  LLMVYEKALTLGHITDDLACQYV-----------FTGLAQRLCSGKFSNSVKLWELRVSTEIKCSSKDSPSPSKNDLKSIFELTKEVLKKFSVSESGSLW
        LL+VYEKALTLGHIT+DL CQYV              LA+RLCSGK SNSVKLW LRVS EIKC  KDSPSPSK+D+KSIFELTK+VL+ FSVSES SLW
Subjt:  LLMVYEKALTLGHITDDLACQYV-----------FTGLAQRLCSGKFSNSVKLWELRVSTEIKCSSKDSPSPSKNDLKSIFELTKEVLKKFSVSESGSLW

Query:  LKVLKFFANQSYYFDKLVEISLLALAKSGGNEDGFSLSSVIVDFVLQKDGIQHTREVYKKFLGLPHPGLAMYQTCIQLESNLATAGDKDGLANARKLFES
        L VL FFANQSYYFDKL+EISLLALAK GG+EDGFSLSS IVDFVLQKDGIQ TREVYKKFLGLPHPG AMY+TCIQLESNLA+AGDKDGLANARKLFES
Subjt:  LKVLKFFANQSYYFDKLVEISLLALAKSGGNEDGFSLSSVIVDFVLQKDGIQHTREVYKKFLGLPHPGLAMYQTCIQLESNLATAGDKDGLANARKLFES

Query:  ALTTYGQNVSLWQEYYTLESKIGSSETAAAVRWRARKTLKDATALATSSDL
        ALTTY Q+VSLWQEY  +E+KIGSSETAAA+RWRARKTLKDATAL TSSDL
Subjt:  ALTTYGQNVSLWQEYYTLESKIGSSETAAAVRWRARKTLKDATALATSSDL

A0A6J1KQP1 U3 small nucleolar RNA-associated protein 6 homolog

0.0e+00

84.79

Show/hide

Query:  MADVVQFRLEGMVDELDDLEKRGLFSRREIAEIVKQRRKFEYRLKRPCPLKQDYLTYIDYEIQLDSLRHLRRKAVARELKKQGNKKMRISISDFAGVKRI
        MADVVQFRLEGM+DELDDLE+RGLFSRREIAEIVKQRRKFEYRLKRPCPLKQDY+ YIDYE  LDSLR LR+KAV+RELKKQGNKKMR S+SDFA VKRI
Subjt:  MADVVQFRLEGMVDELDDLEKRGLFSRREIAEIVKQRRKFEYRLKRPCPLKQDYLTYIDYEIQLDSLRHLRRKAVARELKKQGNKKMRISISDFAGVKRI

Query:  LYIYRLAVSRYKGDIDLWFRYLEFCRARKNGRMKKVLAQLIRFHPKVPGVWIYAAAWEFDHNINVDAARSLMLSGLRVCPTSEDLWIEYLRMELTYLNKL
        LYIYRLAVSRYKGDIDLWFRYLEFCRA+KNGRMKKVLAQLIRFHPKVPGVWIYAAAWEFDH+ NVDAARSLMLSGLRVCPTSEDLW+EYLRMELTYLNKL
Subjt:  LYIYRLAVSRYKGDIDLWFRYLEFCRARKNGRMKKVLAQLIRFHPKVPGVWIYAAAWEFDHNINVDAARSLMLSGLRVCPTSEDLWIEYLRMELTYLNKL

Query:  KARKVALGEDEGSLVRENITAVEKQWREENKDLFMSMGETRGDSDGSSVETVSKNKLDLFREKGSNILETIYNGAIEALPSSFSLRKRVLEILEAMDLAH
        KARKVALGEDEGSLVREN  A +KQWREENKDLFMS+GE R D+DGS  ET SKNKLDLFREKGSNILETIYNGAIEALPSSFSLRKRVLEILEAMDLAH
Subjt:  KARKVALGEDEGSLVRENITAVEKQWREENKDLFMSMGETRGDSDGSSVETVSKNKLDLFREKGSNILETIYNGAIEALPSSFSLRKRVLEILEAMDLAH

Query:  SEEMQSKILQDIKRDFASQPQYWDWLARLKYNPENVQGTSDIKEISRIEEAVKVYEEGLECMPSSALFSLYVKFLRSIIVPVKGEQTLGLSSHTENITSR
        SEE+ SKILQDIKRDF ++PQYWDWLARL+YNP++VQG SD K+ SRIE+AV+VYEEGLE +PSSA+FSLYV+FL ++I  VKGEQ+ GLSS T N TSR
Subjt:  SEEMQSKILQDIKRDFASQPQYWDWLARLKYNPENVQGTSDIKEISRIEEAVKVYEEGLECMPSSALFSLYVKFLRSIIVPVKGEQTLGLSSHTENITSR

Query:  LLMVYEKALTLGHITDDLACQYV-----------FTGLAQRLCSGKFSNSVKLWELRVSTEIKCSSKDSPSPSKNDLKSIFELTKEVLKKFSVSESGSLW
        LLMVYEKALT GHITDDLACQYV              LA+RLCSGK SNSVKLW LRVSTEIK   KDSPSPSK+DLKSIFELTKEVL+ FSVSESGSLW
Subjt:  LLMVYEKALTLGHITDDLACQYV-----------FTGLAQRLCSGKFSNSVKLWELRVSTEIKCSSKDSPSPSKNDLKSIFELTKEVLKKFSVSESGSLW

Query:  LKVLKFFANQSYYFDKLVEISLLALAKSGGNEDGFSLSSVIVDFVLQKDGIQHTREVYKKFLGLPHPGLAMYQTCIQLESNLATAGDKDGLANARKLFES
        L VLKFFANQS+YFD+LVEISL ALAKSGG+EDGFSLSS IVDF+LQKDGIQ TREVYKKFL LPHPGLA+Y+TCIQLESNLA+AGDK+GLA+ARKLFES
Subjt:  LKVLKFFANQSYYFDKLVEISLLALAKSGGNEDGFSLSSVIVDFVLQKDGIQHTREVYKKFLGLPHPGLAMYQTCIQLESNLATAGDKDGLANARKLFES

Query:  ALTTYGQNVSLWQEYYTLESKIGSSETAAAVRWRARKTLKDATALATSSDL
        AL TYGQ+VSLWQEYY +ESK+GSSETAAA+RWRARKTLKDATALATSSDL
Subjt:  ALTTYGQNVSLWQEYYTLESKIGSSETAAAVRWRARKTLKDATALATSSDL

SwissProt top hits

e value

%identity

Alignment

O60188 U3 small nucleolar RNA-associated protein 6

6.9e-31

35.11

Show/hide

Query:  MADVVQFRLEGMVDELDDLEKRGLFSRREIAEIVKQRRKFEYRLKRPCPLKQDYLTYIDYEIQLDSLRHLRRKAVARELKKQGNKKMRISISDFAGVKRI
        MA+ VQ+ +E  V EL+DL ++ +F+R EI  I+K RR FE +L R      D+L+YI YEI L++LR  R K +        N   +I+ISD+AG +++
Subjt:  MADVVQFRLEGMVDELDDLEKRGLFSRREIAEIVKQRRKFEYRLKRPCPLKQDYLTYIDYEIQLDSLRHLRRKAVARELKKQGNKKMRISISDFAGVKRI

Query:  LYIYRLAVSRYKGDIDLWFRYLEFCRARKN-GRMKKVLAQLIRFHPKVPGVWIYAAAWEFDHNINVDAARSLMLSGLRVCPTSEDLWIEYLRMELTYLNK
        L+++  A +++ GD+ LW  Y+ + +  K    + K+    ++ HP    +W+ A   EF  N NV AAR+LM   LR+   +  +W  Y R+EL+Y+ K
Subjt:  LYIYRLAVSRYKGDIDLWFRYLEFCRARKN-GRMKKVLAQLIRFHPKVPGVWIYAAAWEFDHNINVDAARSLMLSGLRVCPTSEDLWIEYLRMELTYLNK

Query:  LKARKVALGEDEGSLVRENIT--AVEKQWREENKDLFMSMGETRGDSDGSSVETVSKNKLDL
        L AR   L  +  S   ENIT    E      + D       +  +  GSS   V KN  DL
Subjt:  LKARKVALGEDEGSLVRENIT--AVEKQWREENKDLFMSMGETRGDSDGSSVETVSKNKLDL

Q02354 U3 small nucleolar RNA-associated protein 6

7.9e-27

29.21

Show/hide

Query:  QFRLEGMVDELDDLEKRGLFSRREIAEIVKQRRKFEYRLKRPCPLKQDYLTYIDYEIQLDSLRHLRRKAVARELKKQGNKKMRISISDFAGVKRILYIYR
        ++ LE  + E+DDL ++GLF++ E++ I+K+R  FE+RL        DY+ YI+YE  ++ LR  R K +  ++KK        S+SD++  +RI +IY+
Subjt:  QFRLEGMVDELDDLEKRGLFSRREIAEIVKQRRKFEYRLKRPCPLKQDYLTYIDYEIQLDSLRHLRRKAVARELKKQGNKKMRISISDFAGVKRILYIYR

Query:  LAVSRYKGDIDLWFRYLEFCRARKN----GRMKKVLAQLIRFHPKVPGVWIYAAAWEFDHNINVDAARSLMLSGLRVCPTSEDLWIEYLRMELTYLNKLK
           +++  D+  W  YL + +AR N     ++  +  QL++ HP    +WI  A +E++ + N  + R++  +GLR  P    LW EY++ EL ++ KL 
Subjt:  LAVSRYKGDIDLWFRYLEFCRARKN----GRMKKVLAQLIRFHPKVPGVWIYAAAWEFDHNINVDAARSLMLSGLRVCPTSEDLWIEYLRMELTYLNKLK

Query:  ARKVALGEDEGSLVRENITAVEKQWREENKDLFMSMGETRGDSDGSSVETVSKNKLDLFREKGSNIL
         R+  +G     L+ E    ++ Q  ++N     +  E +      S     K+KL+   E   ++L
Subjt:  ARKVALGEDEGSLVRENITAVEKQWREENKDLFMSMGETRGDSDGSSVETVSKNKLDLFREKGSNIL

Q54WN5 U3 small nucleolar RNA-associated protein 6 homolog

9.0e-31

23.56

Show/hide

Query:  DVVQFRLEGMVDELDDLEKRGLFSRREIAEIVKQRRKFEYRLKRPCPLKQDYLTYIDYEIQLDSLRHLRRKAVARELKKQGNKKMRISISDFAGVKRILY
        D V F ++ +++E   L   G+ S++E  +I+K+R   E ++      K D+LTYI YE++LD L H R KA          K +       + ++  + 
Subjt:  DVVQFRLEGMVDELDDLEKRGLFSRREIAEIVKQRRKFEYRLKRPCPLKQDYLTYIDYEIQLDSLRHLRRKAVARELKKQGNKKMRISISDFAGVKRILY

Query:  IYRLAVSRYKGDIDLWFRYL--EFCRARKNGRMKKVLAQLIRFHPKVPGVWIYAAAWEFDHNINVDAARSLMLSGLRVCPTSEDLWIEYLRMELTYLNKL
        ++  A  ++  D  LW   L     RA K G  +     L    P+   +W  AA +EF+ N N+  AR+L+ +G++   T + LW  +  MELTY++ L
Subjt:  IYRLAVSRYKGDIDLWFRYL--EFCRARKNGRMKKVLAQLIRFHPKVPGVWIYAAAWEFDHNINVDAARSLMLSGLRVCPTSEDLWIEYLRMELTYLNKL

Query:  KAR----KVALGEDEGSLVRENITAVEKQWREENKDLFMSMGETRGDSDGSSVETVSKNKLDLFREKGSNILETIYNGAIE-ALPSSFSLRKRVLEIL-E
         +        + E+E   ++ N+ ++ K  + E KD F++ G+          E +S +KL         I + ++  AI+ ++   F  RK   +I  +
Subjt:  KAR----KVALGEDEGSLVRENITAVEKQWREENKDLFMSMGETRGDSDGSSVETVSKNKLDLFREKGSNILETIYNGAIE-ALPSSFSLRKRVLEIL-E

Query:  AMDLAHSEE--------MQSKILQDIKRDFASQPQYWDWLARLKYNPENVQGTSDIKEISRIEEAVKVYEEGLECMPSSALFSLYVKFLRSIIVPVKGEQ
         +D+    E        +Q +IL+ +  DF +  + + +LA ++ +      +S+   + R+  + K+  +GL  + S +    Y+ F+R IIV +K   
Subjt:  AMDLAHSEE--------MQSKILQDIKRDFASQPQYWDWLARLKYNPENVQGTSDIKEISRIEEAVKVYEEGLECMPSSALFSLYVKFLRSIIVPVKGEQ

Query:  TLGLSSHTENITSRLLMVYEKALTLGHITDDLACQYVFTGLAQRLCSGKFSNSVKLWELRVSTEIKCSSKDSPSPSKNDLKSIFELTKEVLKKFSVSESG
         L  +   ENIT  LL  Y+ ++   +I  +   QY    L +    GK ++++K+            S++S    KN  +   +    ++K   V    
Subjt:  TLGLSSHTENITSRLLMVYEKALTLGHITDDLACQYVFTGLAQRLCSGKFSNSVKLWELRVSTEIKCSSKDSPSPSKNDLKSIFELTKEVLKKFSVSESG

Query:  SLWLKVLKFFANQSYY------FDKLVEISLLALAKSGGNEDGFSLSSVIVDFVLQKDGIQHTREVYKKFLGLPHPGL----AMYQTCIQLESNLATAGD
           +K+    +N + Y      F+  V+    +   +  +    S S++ +++   +   +  ++ YKK + L    L      YQ CI  E        
Subjt:  SLWLKVLKFFANQSYY------FDKLVEISLLALAKSGGNEDGFSLSSVIVDFVLQKDGIQHTREVYKKFLGLPHPGL----AMYQTCIQLESNLATAGD

Query:  KDGLANARKLFESALT---TYGQNVSLWQEYYTLESK-IGSSETAAAVRWRARKTLKDATAL
        +  + + R L+E  L+      ++V +W  Y   E K  G  E A  +  R +K+L D   L
Subjt:  KDGLANARKLFESALT---TYGQNVSLWQEYYTLESK-IGSSETAAAVRWRARKTLKDATAL

Q8VCY6 U3 small nucleolar RNA-associated protein 6 homolog

2.1e-43

24.21

Show/hide

Query:  MADVVQFRLEGMVDELDDLEKRGLFSRREIAEIVKQRRKFEYRLKRPCPLKQDYLTYIDYEIQLDSLRHLRRKAVARELKKQGNKKMRISISDFAGVKRI
        MA+++Q R+E  + EL+ LE+ GLFS  EI  I+K+    EY++ R   LK+D++ Y+ YEI L  L   RR  +    KK           +++ V R+
Subjt:  MADVVQFRLEGMVDELDDLEKRGLFSRREIAEIVKQRRKFEYRLKRPCPLKQDYLTYIDYEIQLDSLRHLRRKAVARELKKQGNKKMRISISDFAGVKRI

Query:  LYIYRLAVSRYKGDIDLWFRYLEFCRA-RKNGRMKKVLAQLIRFHPKVPGVWIYAAAWEFDHNINVDAARSLMLSGLRVCPTSEDLWIEYLRMELTYLNK
          ++  A +++K D+ LW  Y+ FC+       + K+ + ++  H   P +WI AA WE +  ++ ++AR L L  LR  P    L+ EY RMEL +  K
Subjt:  LYIYRLAVSRYKGDIDLWFRYLEFCRA-RKNGRMKKVLAQLIRFHPKVPGVWIYAAAWEFDHNINVDAARSLMLSGLRVCPTSEDLWIEYLRMELTYLNK

Query:  LKARKVALGEDEGSLVRENITAVEKQWREENKDLFMSMGETRGDSDGSSVETVSKNKLDLFREKGSNILETIYNGAIEALPSSFSLRKRVLEILEAMDLA
        L+  K                       +E +   M MG      D    E + K +L             IY  +I  +  +      +L I +  D A
Subjt:  LKARKVALGEDEGSLVRENITAVEKQWREENKDLFMSMGETRGDSDGSSVETVSKNKLDLFREKGSNILETIYNGAIEALPSSFSLRKRVLEILEAMDLA

Query:  HSEEMQSKILQDIKRDFASQPQYWDWLARLKYNPENVQGTSD--------IKEISRIEEAVKVYEEGLECMPSSALFSLYVKFL------RSIIVPVKGE
          +++Q +I  D++      P  WD++AR +   E+  G           ++   R E    VYEE ++ +P+ A++  Y+ F       ++  VP++G+
Subjt:  HSEEMQSKILQDIKRDFASQPQYWDWLARLKYNPENVQGTSD--------IKEISRIEEAVKVYEEGLECMPSSALFSLYVKFL------RSIIVPVKGE

Query:  QTLGLSSHTENITSRLLMVYEKALTLGHITDDLACQYVFTGLAQRLC----------SGKFSNSVKLWELRVSTEIKCSSKDSPSPSKNDLKSIFELTKE
        +             R ++ + KA  L  +++    Q++   L Q L           +  F +SV +W+ ++   I     DS SP   D++  FE   E
Subjt:  QTLGLSSHTENITSRLLMVYEKALTLGHITDDLACQYVFTGLAQRLC----------SGKFSNSVKLWELRVSTEIKCSSKDSPSPSKNDLKSIFELTKE

Query:  VLKKFSVSESGSLWLKVLKFFANQSYYFDKLVEISLLALAKSGGNEDGFSLSSVIVDFVLQKDGIQHTREVYKKFLGLPHPGLAMYQTCIQLESNLATAG
                    LW+   ++  +     D         +A +G +    +L    +D+  +  G +  R V+K         +  ++  +Q E       
Subjt:  VLKKFSVSESGSLWLKVLKFFANQSYYFDKLVEISLLALAKSGGNEDGFSLSSVIVDFVLQKDGIQHTREVYKKFLGLPHPGLAMYQTCIQLESNLATAG

Query:  DKDGLANARKLFESALTTYGQNVS-LWQEYY--TLESKIGSSETAAAVRWRARKTLKDATA
        +   + N R+ +E AL  +G + S LW +Y    L    G  E    + WRA K L+  +A
Subjt:  DKDGLANARKLFESALTTYGQNVS-LWQEYY--TLESKIGSSETAAAVRWRARKTLKDATA

Q9NYH9 U3 small nucleolar RNA-associated protein 6 homolog

1.9e-41

Show/hide

Query:  MADVVQFRLEGMVDELDDLEKRGLFSRREIAEIVKQRRKFEYRLKRPCPLKQDYLTYIDYEIQLDSLRHLRRKAVARELKKQGNKKMRISISDFAGVKRI
        MA+++Q R+E  + EL+ LE+ GLFS  EI  I+K+    EY+++R    K+D++ Y+ YEI L  L   RR  +    KK    ++  SI     V R+
Subjt:  MADVVQFRLEGMVDELDDLEKRGLFSRREIAEIVKQRRKFEYRLKRPCPLKQDYLTYIDYEIQLDSLRHLRRKAVARELKKQGNKKMRISISDFAGVKRI

Query:  LYIYRLAVSRYKGDIDLWFRYLEFCRA-RKNGRMKKVLAQLIRFHPKVPGVWIYAAAWEFDHNINVDAARSLMLSGLRVCPTSEDLWIEYLRMELTYLNK
          +++ A +++K D+ LW  Y+ FC+      R+ KV + ++  H   P +WI AA WE +  ++ ++AR L L  LR  P    L+ EY RMEL +  K
Subjt:  LYIYRLAVSRYKGDIDLWFRYLEFCRA-RKNGRMKKVLAQLIRFHPKVPGVWIYAAAWEFDHNINVDAARSLMLSGLRVCPTSEDLWIEYLRMELTYLNK

Query:  LKARKVALGEDEGSLVRENITAVEKQWREENKDLFMSMGETRGDSDGSSVETVSKNKLDLFREKGSNILETIYNGAIEALPSSFSLRKRVLEILEAMDLA
        L+  K     ++ S+  EN    E+  + E                                     +   IY  ++  +  +      +L I +  D A
Subjt:  LKARKVALGEDEGSLVRENITAVEKQWREENKDLFMSMGETRGDSDGSSVETVSKNKLDLFREKGSNILETIYNGAIEALPSSFSLRKRVLEILEAMDLA

Query:  HSEEMQSKILQDIKRDFASQPQYWDWLAR----LKYNPENVQGTSDIK--EISRIEE-AVKVYEEGLECMPSSALFSLYVKFLRSIIVPVKGEQTLGLSS
          +++Q +I  D++      P  WD++AR    ++   E    T   K  E+ R EE    VYEE ++ +P+ A++  Y+ F             L    
Subjt:  HSEEMQSKILQDIKRDFASQPQYWDWLAR----LKYNPENVQGTSDIK--EISRIEE-AVKVYEEGLECMPSSALFSLYVKFLRSIIVPVKGEQTLGLSS

Query:  HTENITSRLLMVYEKALTLGHITDDLACQYVFTGLAQRLC--------------SGKFSNSVKLWELRVSTEIKCSSKDSPSPSKNDLKSIFELTKEVLK
               R + V+ KA  L  +++   CQY    ++  LC              +  F +S  +W+L++   I     +S SP   D+  +FE   E   
Subjt:  HTENITSRLLMVYEKALTLGHITDDLACQYVFTGLAQRLC--------------SGKFSNSVKLWELRVSTEIKCSSKDSPSPSKNDLKSIFELTKEVLK

Query:  KFSVSESGSLWLKVLKFFANQSYYFDKLVEISLLALAKSGGNEDGFSLSSVIVDFVLQKDGIQHTREVYKKFLGLPHPGLAMYQTCIQLESNLATAGDKD
                 LW+   ++        D         LA  G   D  +L +  +D+  +  G +  R V+K         +  ++  IQ E    +     
Subjt:  KFSVSESGSLWLKVLKFFANQSYYFDKLVEISLLALAKSGGNEDGFSLSSVIVDFVLQKDGIQHTREVYKKFLGLPHPGLAMYQTCIQLESNLATAGDKD

Query:  GLANARKLFESALTTYGQ-NVSLWQEYY--TLESKIGSSETAAAVRWRARKTLKDATALA
         +AN R+ +E AL  +G  +  LW +Y    L   +G  E    + WRA K L+  +A A
Subjt:  GLANARKLFESALTTYGQ-NVSLWQEYY--TLESKIGSSETAAAVRWRARKTLKDATALA

Arabidopsis top hits

e value

%identity

Alignment

AT4G28200.1 FUNCTIONS IN: molecular_function unknown; INVOLVED IN: RNA processing; LOCATED IN: intracellular; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: RNA-processing protein, HAT helix (InterPro:IPR003107), U3 small nucleolar RNA-associated protein 6 (InterPro:IPR013949); Has 492 Blast hits to 480 proteins in 206 species: Archae - 0; Bacteria - 2; Metazoa - 128; Fungi - 191; Plants - 60; Viruses - 0; Other Eukaryotes - 111 (source: NCBI BLink).

3.6e-208

57.21

Show/hide

Query:  MADVVQFRLEGMVDELDDLEKRGLFSRREIAEIVKQRRKFEYRLKRPCPLKQDYLTYIDYEIQLDSLRHLRRKAVARELKKQGNKKMRISISDFAGVKRI
        MADVVQ+RLE MVDELDDLE+R +F+R EIAEIVKQRRKFEYRLKRP PLK+D++ YIDYE++LD LR LRRK+VAR  KK+  K    S+SDFAGV RI
Subjt:  MADVVQFRLEGMVDELDDLEKRGLFSRREIAEIVKQRRKFEYRLKRPCPLKQDYLTYIDYEIQLDSLRHLRRKAVARELKKQGNKKMRISISDFAGVKRI

Query:  LYIYRLAVSRYKGDIDLWFRYLEFCRARKNGRMKKVLAQLIRFHPKVPGVWIYAAAWEFDHNINVDAARSLMLSGLRVCPTSEDLWIEYLRMELTYLNKL
        + IYRLA  RYKGDI+LWFRYLEFC+ +++GRMKK LAQ IRFHPKV GVWIYAA+WEFD N+NV AAR+LML+GLRVC  SEDLW+EYLRMELT+LNKL
Subjt:  LYIYRLAVSRYKGDIDLWFRYLEFCRARKNGRMKKVLAQLIRFHPKVPGVWIYAAAWEFDHNINVDAARSLMLSGLRVCPTSEDLWIEYLRMELTYLNKL

Query:  KARKVALGEDEGSLVRENITAVEKQWREENKDLFMSMGETRG--------DSDGSSVETVSKNKLDLFREKGSNILETIYNGAIEALPSSFSLRKRVLEI
        KARKVALGED+GSLVR+  T  ++QW++ENK+LFMS+ E  G        DS    VE V++ K+D  +EKGSN+L+TIY+GA+EA+PSSF LRKR LEI
Subjt:  KARKVALGEDEGSLVRENITAVEKQWREENKDLFMSMGETRG--------DSDGSSVETVSKNKLDLFREKGSNILETIYNGAIEALPSSFSLRKRVLEI

Query:  LEAMDLAHSEEMQSKILQDIKRDFASQPQYWDWLARLKYNP--ENVQGTSDIKEISRIEEAVKVYEEGLECMPSSALFSLYVKFLRSIIVPVKGEQTLGL
        LEA DLAHS+EM++ IL D+KRDF ++P+YW+WLAR + +    N  G        ++++A++V+EEGL+ + SS++F +Y+ FL   IV   G++   +
Subjt:  LEAMDLAHSEEMQSKILQDIKRDFASQPQYWDWLARLKYNP--ENVQGTSDIKEISRIEEAVKVYEEGLECMPSSALFSLYVKFLRSIIVPVKGEQTLGL

Query:  SSHTENITSRLLMVYEKALTLGHITDDLACQYV-----------FTGLAQRLCSGKFSNSVKLWELRVSTEIKCSSKDSPSPSKNDLKSIFELTKEVLKK
        SS +  I S ++ VY+KA   G +T++LA +YV              LA++LCS KF+ S KLW  RVS EI+  S++S SPSK D +++FEL    L+K
Subjt:  SSHTENITSRLLMVYEKALTLGHITDDLACQYV-----------FTGLAQRLCSGKFSNSVKLWELRVSTEIKCSSKDSPSPSKNDLKSIFELTKEVLKK

Query:  FSVSESGSLWLKVLKFFANQSYYFDKLVEISLLALAKSGGNEDGFSLSSVIVDFVLQKDGIQHTREVYKKFLGLPHPGLAMYQTCIQLESNLATAGDKDG
          +SES SLWL    FFA+Q  Y DKLVE+S+L+  KS G++  FSL+S +V FVL+  G    R++YK+FL LP P L +Y+ CI++E+NL + GDKDG
Subjt:  FSVSESGSLWLKVLKFFANQSYYFDKLVEISLLALAKSGGNEDGFSLSSVIVDFVLQKDGIQHTREVYKKFLGLPHPGLAMYQTCIQLESNLATAGDKDG

Query:  LANARKLFESALTTYGQNVSLWQEYYTLESKIGSSETAAAVRWRARKTLKDA
        L+NARKL++SA+ +YGQ+V LW+ YY+LE+K+G+SETA  V WRARKTL ++
Subjt:  LANARKLFESALTTYGQNVSLWQEYYTLESKIGSSETAAAVRWRARKTLKDA

Sequences

Show/hide sequences

CDS sequence

Show/hide CDS sequence

ATGGCGGACGTTGTGCAGTTCCGTCTCGAGGGCATGGTCGACGAGCTCGATGACCTCGAGAAACGTGGCCTCTTCTCCCGGCGAGAGATTGCTGAGATTGTCAAGCAACG
GCGCAAGTTCGAGTACCGTCTGAAGCGCCCTTGTCCACTTAAGCAGGACTATCTGACTTATATCGATTATGAGATTCAGTTGGACTCGCTTCGTCATCTAAGGAGGAAGG
CAGTGGCTCGCGAACTTAAGAAACAGGGAAATAAAAAGATGAGAATTTCTATTTCCGACTTTGCCGGTGTGAAGAGGATCTTGTACATTTATCGGCTTGCGGTTTCTAGG
TATAAGGGTGATATTGATCTTTGGTTTCGCTATCTCGAGTTTTGTAGAGCACGAAAGAACGGGAGAATGAAAAAGGTTCTAGCTCAGCTGATTAGATTCCACCCAAAAGT
TCCTGGGGTTTGGATATATGCTGCTGCTTGGGAGTTCGACCATAATATCAATGTGGATGCAGCACGTTCTCTTATGTTAAGTGGTTTGAGAGTTTGCCCAACTTCAGAGG
ATCTTTGGATAGAATATTTGCGGATGGAACTTACTTATCTTAATAAGTTGAAGGCTCGGAAGGTTGCCCTTGGAGAGGACGAGGGAAGTCTGGTACGTGAAAATATAACT
GCTGTGGAGAAACAGTGGAGAGAAGAAAATAAAGATTTGTTTATGTCAATGGGTGAAACAAGGGGAGATAGTGATGGATCAAGTGTCGAGACGGTGTCAAAGAATAAATT
GGATTTGTTTCGAGAAAAGGGTTCAAACATTTTAGAAACTATCTACAATGGAGCAATTGAAGCTCTACCTTCTAGTTTTAGTTTGAGAAAGCGTGTCTTAGAGATACTGG
AAGCAATGGATTTAGCTCATTCAGAAGAAATGCAGTCAAAAATATTACAGGATATAAAAAGAGACTTCGCTTCACAACCACAATATTGGGACTGGCTAGCTAGACTTAAG
TATAATCCTGAAAATGTGCAGGGAACGAGTGATATAAAGGAAATTTCTCGGATTGAAGAGGCTGTCAAGGTCTACGAGGAAGGCCTGGAGTGTATGCCTTCATCTGCTCT
TTTTAGCTTGTATGTGAAGTTTTTGAGGAGCATCATTGTCCCTGTTAAGGGTGAACAAACGTTGGGGCTATCTAGTCATACTGAAAACATTACTTCGCGACTCTTGATGG
TTTATGAAAAGGCTCTAACTTTAGGACATATTACAGACGATTTAGCATGCCAATATGTTTTCACAGGACTTGCACAAAGACTCTGTAGTGGAAAATTTTCTAATTCTGTG
AAGTTATGGGAATTGAGAGTCTCTACAGAGATAAAATGCTCTTCGAAGGATTCCCCTTCTCCAAGTAAGAATGATCTGAAGTCCATTTTTGAACTGACAAAAGAGGTTCT
GAAAAAATTTTCAGTTTCGGAATCTGGGAGCCTGTGGCTAAAGGTCCTCAAATTTTTTGCCAATCAGAGTTATTATTTTGACAAATTGGTGGAAATTTCACTTTTAGCAT
TGGCTAAATCTGGTGGAAATGAGGATGGATTTTCACTCTCCTCAGTCATTGTTGATTTTGTTCTACAAAAAGATGGAATTCAGCATACAAGAGAAGTGTATAAAAAATTT
CTTGGCTTACCCCATCCAGGGCTTGCTATGTACCAAACATGTATTCAGCTGGAATCCAACCTTGCAACTGCAGGGGATAAAGATGGTCTTGCAAATGCTCGAAAGCTATT
TGAATCTGCACTTACAACTTATGGCCAAAATGTTAGTTTGTGGCAAGAGTACTACACATTGGAATCTAAGATAGGATCATCGGAAACAGCAGCAGCAGTTCGTTGGCGTG
CAAGGAAAACATTAAAAGATGCTACAGCCCTTGCTACATCCTCTGATTTGTGA

mRNA sequence

Show/hide mRNA sequence

Protein sequence

Show/hide protein sequence

MADVVQFRLEGMVDELDDLEKRGLFSRREIAEIVKQRRKFEYRLKRPCPLKQDYLTYIDYEIQLDSLRHLRRKAVARELKKQGNKKMRISISDFAGVKRILYIYRLAVSR
YKGDIDLWFRYLEFCRARKNGRMKKVLAQLIRFHPKVPGVWIYAAAWEFDHNINVDAARSLMLSGLRVCPTSEDLWIEYLRMELTYLNKLKARKVALGEDEGSLVRENIT
AVEKQWREENKDLFMSMGETRGDSDGSSVETVSKNKLDLFREKGSNILETIYNGAIEALPSSFSLRKRVLEILEAMDLAHSEEMQSKILQDIKRDFASQPQYWDWLARLK
YNPENVQGTSDIKEISRIEEAVKVYEEGLECMPSSALFSLYVKFLRSIIVPVKGEQTLGLSSHTENITSRLLMVYEKALTLGHITDDLACQYVFTGLAQRLCSGKFSNSV
KLWELRVSTEIKCSSKDSPSPSKNDLKSIFELTKEVLKKFSVSESGSLWLKVLKFFANQSYYFDKLVEISLLALAKSGGNEDGFSLSSVIVDFVLQKDGIQHTREVYKKF
LGLPHPGLAMYQTCIQLESNLATAGDKDGLANARKLFESALTTYGQNVSLWQEYYTLESKIGSSETAAAVRWRARKTLKDATALATSSDL

IVF0018695 (gene) of Melon (IVF77) v1 genome