CuGenDBv2

Gene ID	IVF0018700
Organism	Cucumis melo ssp. agrestis cv. IVF77 (Melon (IVF77) v1)
Description	chromosome transmission fidelity protein 8 homolog
Genome location	chr09:19728131..19730358
RNA-Seq Expression	IVF0018700
Synteny	IVF0018700
Gene Ontology terms	GO:0007064 - mitotic sister chromatid cohesion (biological process) GO:0031390 - Ctf18 RFC-like complex (cellular component)
InterPro domains	IPR018607 - Chromosome transmission fidelity protein 8

Homology

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GenBank top hits

e value

%identity

Alignment

KAA0055164.1 hypothetical protein E6C27_scaffold231G00960 [Cucumis melo var. makuwa]

4.27e-94

100

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Query:  MQIKLKCNCGETKCLEWALVELQGVVEPQSTFQDRIQNLEIGILCRPSAQEMYTFTVGYHELTGSKVSLKKPLLVLKKTRSVDEDQSSDIKSGNAELEVI
        MQIKLKCNCGETKCLEWALVELQGVVEPQSTFQDRIQNLEIGILCRPSAQEMYTFTVGYHELTGSKVSLKKPLLVLKKTRSVDEDQSSDIKSGNAELEVI
Subjt:  MQIKLKCNCGETKCLEWALVELQGVVEPQSTFQDRIQNLEIGILCRPSAQEMYTFTVGYHELTGSKVSLKKPLLVLKKTRSVDEDQSSDIKSGNAELEVI

Query:  GIIRQRILFKTRPKALISKPEPLVKERSRASGSAVKGQTT
        GIIRQRILFKTRPKALISKPEPLVKERSRASGSAVKGQTT
Subjt:  GIIRQRILFKTRPKALISKPEPLVKERSRASGSAVKGQTT

XP_004143632.1 putative uncharacterized protein DDB_G0287975 isoform X1 [Cucumis sativus]

5.61e-90

94.29

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Query:  MQIKLKCNCGETKCLEWALVELQGVVEPQSTFQDRIQNLEIGILCRPSAQEMYTFTVGYHELTGSKVSLKKPLLVLKKTRSVDEDQSSDIKSGNAELEVI
        M+IKLKCNCGETKCLEWA+VELQGVVEPQSTFQDR+QNLEIGILCRPSAQE+YTFTVGYHELTGSK+SLKKPLLVLKKTRSVDEDQSSD KSGNAELEVI
Subjt:  MQIKLKCNCGETKCLEWALVELQGVVEPQSTFQDRIQNLEIGILCRPSAQEMYTFTVGYHELTGSKVSLKKPLLVLKKTRSVDEDQSSDIKSGNAELEVI

Query:  GIIRQRILFKTRPKALISKPEPLVKERSRASGSAVKGQTT
        GIIRQRILFKTRPKALISKP+PLVKERSRASGSAV GQTT
Subjt:  GIIRQRILFKTRPKALISKPEPLVKERSRASGSAVKGQTT

XP_008467231.1 PREDICTED: putative uncharacterized protein DDB_G0287975 [Cucumis melo]

2.89e-92

98.57

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Query:  MQIKLKCNCGETKCLEWALVELQGVVEPQSTFQDRIQNLEIGILCRPSAQEMYTFTVGYHELTGSKVSLKKPLLVLKKTRSVDEDQSSDIKSGNAELEVI
        MQIKLKCNCGETKCLEWA+VELQGVVE QSTFQDRIQNLEIGILCRPSAQEMYTFTVGYHELTGSKVSLKKPLLVLKKTRSVDEDQSSDIKSGNAELEVI
Subjt:  MQIKLKCNCGETKCLEWALVELQGVVEPQSTFQDRIQNLEIGILCRPSAQEMYTFTVGYHELTGSKVSLKKPLLVLKKTRSVDEDQSSDIKSGNAELEVI

Query:  GIIRQRILFKTRPKALISKPEPLVKERSRASGSAVKGQTT
        GIIRQRILFKTRPKALISKPEPLVKERSRASGSAVKGQTT
Subjt:  GIIRQRILFKTRPKALISKPEPLVKERSRASGSAVKGQTT

XP_023551664.1 putative uncharacterized protein DDB_G0287975 [Cucurbita pepo subsp. pepo]

7.59e-79

83.57

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Query:  MQIKLKCNCGETKCLEWALVELQGVVEPQSTFQDRIQNLEIGILCRPSAQEMYTFTVGYHELTGSKVSLKKPLLVLKKTRSVDEDQSSDIKSGNAELEVI
        MQIK+KCNCGETKCLEWA+VELQG+VE Q +F+DR+Q LEIG+LCRPSAQE+YTFTVGYHELTGSKV LKKPLLVLKK + VDEDQS D KS  AELEVI
Subjt:  MQIKLKCNCGETKCLEWALVELQGVVEPQSTFQDRIQNLEIGILCRPSAQEMYTFTVGYHELTGSKVSLKKPLLVLKKTRSVDEDQSSDIKSGNAELEVI

Query:  GIIRQRILFKTRPKALISKPEPLVKERSRASGSAVKGQTT
        GIIRQRILFKTRPKALISKP+P VKERSRASGSAV GQ T
Subjt:  GIIRQRILFKTRPKALISKPEPLVKERSRASGSAVKGQTT

XP_038906846.1 putative uncharacterized protein DDB_G0287975 [Benincasa hispida]

5.39e-88

93.57

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Query:  MQIKLKCNCGETKCLEWALVELQGVVEPQSTFQDRIQNLEIGILCRPSAQEMYTFTVGYHELTGSKVSLKKPLLVLKKTRSVDEDQSSDIKSGNAELEVI
        MQIKLKCNCGETKCLEWA+VELQGVVEPQSTFQDR+QNLEIGILCRPSAQE+YTFTVGYHELTGSKV LKKPLLVLKK RSVDEDQSSD KS NAELEVI
Subjt:  MQIKLKCNCGETKCLEWALVELQGVVEPQSTFQDRIQNLEIGILCRPSAQEMYTFTVGYHELTGSKVSLKKPLLVLKKTRSVDEDQSSDIKSGNAELEVI

Query:  GIIRQRILFKTRPKALISKPEPLVKERSRASGSAVKGQTT
        GIIRQRILFKTRPKALISKP+PLVKERSRASGSAV GQTT
Subjt:  GIIRQRILFKTRPKALISKPEPLVKERSRASGSAVKGQTT

TrEMBL top hits

e value

%identity

Alignment

A0A0A0KPT4 Uncharacterized protein

6.1e-68

94.29

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Query:  MQIKLKCNCGETKCLEWALVELQGVVEPQSTFQDRIQNLEIGILCRPSAQEMYTFTVGYHELTGSKVSLKKPLLVLKKTRSVDEDQSSDIKSGNAELEVI
        M+IKLKCNCGETKCLEWA+VELQGVVEPQSTFQDR+QNLEIGILCRPSAQE+YTFTVGYHELTGSK+SLKKPLLVLKKTRSVDEDQSSD KSGNAELEVI
Subjt:  MQIKLKCNCGETKCLEWALVELQGVVEPQSTFQDRIQNLEIGILCRPSAQEMYTFTVGYHELTGSKVSLKKPLLVLKKTRSVDEDQSSDIKSGNAELEVI

Query:  GIIRQRILFKTRPKALISKPEPLVKERSRASGSAVKGQTT
        GIIRQRILFKTRPKALISKP+PLVKERSRASGSAV GQTT
Subjt:  GIIRQRILFKTRPKALISKPEPLVKERSRASGSAVKGQTT

A0A1S3CT18 Uncharacterized protein

1.1e-69

98.57

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Query:  MQIKLKCNCGETKCLEWALVELQGVVEPQSTFQDRIQNLEIGILCRPSAQEMYTFTVGYHELTGSKVSLKKPLLVLKKTRSVDEDQSSDIKSGNAELEVI
        MQIKLKCNCGETKCLEWA+VELQGVVE QSTFQDRIQNLEIGILCRPSAQEMYTFTVGYHELTGSKVSLKKPLLVLKKTRSVDEDQSSDIKSGNAELEVI
Subjt:  MQIKLKCNCGETKCLEWALVELQGVVEPQSTFQDRIQNLEIGILCRPSAQEMYTFTVGYHELTGSKVSLKKPLLVLKKTRSVDEDQSSDIKSGNAELEVI

Query:  GIIRQRILFKTRPKALISKPEPLVKERSRASGSAVKGQTT
        GIIRQRILFKTRPKALISKPEPLVKERSRASGSAVKGQTT
Subjt:  GIIRQRILFKTRPKALISKPEPLVKERSRASGSAVKGQTT

A0A5A7UJ36 Uncharacterized protein

4.5e-71

100

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Query:  MQIKLKCNCGETKCLEWALVELQGVVEPQSTFQDRIQNLEIGILCRPSAQEMYTFTVGYHELTGSKVSLKKPLLVLKKTRSVDEDQSSDIKSGNAELEVI
        MQIKLKCNCGETKCLEWALVELQGVVEPQSTFQDRIQNLEIGILCRPSAQEMYTFTVGYHELTGSKVSLKKPLLVLKKTRSVDEDQSSDIKSGNAELEVI
Subjt:  MQIKLKCNCGETKCLEWALVELQGVVEPQSTFQDRIQNLEIGILCRPSAQEMYTFTVGYHELTGSKVSLKKPLLVLKKTRSVDEDQSSDIKSGNAELEVI

Query:  GIIRQRILFKTRPKALISKPEPLVKERSRASGSAVKGQTT
        GIIRQRILFKTRPKALISKPEPLVKERSRASGSAVKGQTT
Subjt:  GIIRQRILFKTRPKALISKPEPLVKERSRASGSAVKGQTT

A0A5D3BQB7 Uncharacterized protein

1.1e-69

98.57

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Query:  MQIKLKCNCGETKCLEWALVELQGVVEPQSTFQDRIQNLEIGILCRPSAQEMYTFTVGYHELTGSKVSLKKPLLVLKKTRSVDEDQSSDIKSGNAELEVI
        MQIKLKCNCGETKCLEWA+VELQGVVE QSTFQDRIQNLEIGILCRPSAQEMYTFTVGYHELTGSKVSLKKPLLVLKKTRSVDEDQSSDIKSGNAELEVI
Subjt:  MQIKLKCNCGETKCLEWALVELQGVVEPQSTFQDRIQNLEIGILCRPSAQEMYTFTVGYHELTGSKVSLKKPLLVLKKTRSVDEDQSSDIKSGNAELEVI

Query:  GIIRQRILFKTRPKALISKPEPLVKERSRASGSAVKGQTT
        GIIRQRILFKTRPKALISKPEPLVKERSRASGSAVKGQTT
Subjt:  GIIRQRILFKTRPKALISKPEPLVKERSRASGSAVKGQTT

A0A6J1I4S6 Uncharacterized protein

2.3e-59

83.57

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Query:  MQIKLKCNCGETKCLEWALVELQGVVEPQSTFQDRIQNLEIGILCRPSAQEMYTFTVGYHELTGSKVSLKKPLLVLKKTRSVDEDQSSDIKSGNAELEVI
        MQIK+KCNCGETKCLEWA+VELQG+VE Q +F+DR Q LEIG+LCRPSAQE+YTFTVGYHELTGSKV LKKPLLVLKK + VDEDQS D KS  AELEVI
Subjt:  MQIKLKCNCGETKCLEWALVELQGVVEPQSTFQDRIQNLEIGILCRPSAQEMYTFTVGYHELTGSKVSLKKPLLVLKKTRSVDEDQSSDIKSGNAELEVI

Query:  GIIRQRILFKTRPKALISKPEPLVKERSRASGSAVKGQTT
        GIIRQR LFKTRPKALISKP+P VKERSRASGSAV GQTT
Subjt:  GIIRQRILFKTRPKALISKPEPLVKERSRASGSAVKGQTT

SwissProt top hits

e value

%identity

Alignment

P0C6T1 Chromosome transmission fidelity protein 8 homolog

8.3e-06

32.04

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Query:  EWALVELQGVVEPQSTFQDRIQNLEIGILCRPSAQEMYTFTVGYHELTGSKVSLKKPLLVLKKTRSVDEDQSSDIKSGNAELEVIGIIRQRILFKTRPKA
        EW L+ELQG +E  + +   +    +G L   + + +    VG+H L G  + L+KP  VL K     +D     +    +  V  +I+ +ILFKTRPK 
Subjt:  EWALVELQGVVEPQSTFQDRIQNLEIGILCRPSAQEMYTFTVGYHELTGSKVSLKKPLLVLKKTRSVDEDQSSDIKSGNAELEVIGIIRQRILFKTRPKA

Query:  LIS
        +I+
Subjt:  LIS

P0CG13 Chromosome transmission fidelity protein 8 homolog

2.2e-06

33.01

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Query:  EWALVELQGVVEPQSTFQDRIQNLEIGILCRPSAQEMYTFTVGYHELTGSKVSLKKPLLVLKKTRSVDEDQSSDIKSGNAELEVIGIIRQRILFKTRPKA
        EW L+ELQG +E  + +   +    +G L   + + +    VG+H L G  + L+KP  VL K    D+D     +       V  +I+ +ILFKTRPK 
Subjt:  EWALVELQGVVEPQSTFQDRIQNLEIGILCRPSAQEMYTFTVGYHELTGSKVSLKKPLLVLKKTRSVDEDQSSDIKSGNAELEVIGIIRQRILFKTRPKA

Query:  LIS
        +I+
Subjt:  LIS

P0CG15 Chromosome transmission fidelity protein 8 homolog

2.2e-06

32.04

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Query:  EWALVELQGVVEPQSTFQDRIQNLEIGILCRPSAQEMYTFTVGYHELTGSKVSLKKPLLVLKKTRSVDEDQSSDIKSGNAELEVIGIIRQRILFKTRPKA
        EW L+ELQG +E  + +   +    +G L   + + +    VG+H L G  + L+KP  VL K     +D     +    +  V  +I+ +ILFKTRPK 
Subjt:  EWALVELQGVVEPQSTFQDRIQNLEIGILCRPSAQEMYTFTVGYHELTGSKVSLKKPLLVLKKTRSVDEDQSSDIKSGNAELEVIGIIRQRILFKTRPKA

Query:  LIS
        +I+
Subjt:  LIS

Q54JL4 Putative uncharacterized protein DDB_G0287975

1.8e-08

32.58

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Query:  MQIKLKCNCGETKCLEWALVELQGVVEPQSTFQDRIQNLEIGILC-RPSAQEMYTFTVGYHELTGSKVSLKKPLLVLKKTR-------------SVD-ED
        MQI +K     T   EW +++LQG +E    +   ++N  +GIL  +P+ ++ ++F +G   L G +V LKKPLLV+KK++             +VD +D
Subjt:  MQIKLKCNCGETKCLEWALVELQGVVEPQSTFQDRIQNLEIGILC-RPSAQEMYTFTVGYHELTGSKVSLKKPLLVLKKTR-------------SVD-ED

Query:  QSSDIKSGNAELEVIGIIRQRILFKTRPKALI
           + K    E  + GI   +I F TRP   I
Subjt:  QSSDIKSGNAELEVIGIIRQRILFKTRPKALI

Q65ZA6 Chromosome transmission fidelity protein 8

4.9e-06

39.78

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Query:  VVEPQSTFQDRIQNLEIG----ILCRPSAQEMYTFTVGYHELTGSKVSLKKPLLVLKKTRSVDEDQSSDIKSGNAELEVIGIIRQRILFKTRP
        +VE Q+T + +  +L IG    I  + S ++  T TVG   + G   SLKKPL VL+KT +   D  S   S + EL+   IIR+RI F +RP
Subjt:  VVEPQSTFQDRIQNLEIG----ILCRPSAQEMYTFTVGYHELTGSKVSLKKPLLVLKKTRSVDEDQSSDIKSGNAELEVIGIIRQRILFKTRP

Arabidopsis top hits

e value

%identity

Alignment

AT5G52220.1 CONTAINS InterPro DOMAIN/s: Chromosome transmission fidelity protein 8 (InterPro:IPR018607); Has 127 Blast hits to 127 proteins in 63 species: Archae - 0; Bacteria - 0; Metazoa - 70; Fungi - 17; Plants - 31; Viruses - 0; Other Eukaryotes - 9 (source: NCBI BLink).

2.7e-36

64.71

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Query:  MQIKLKCNCGETKCLEWALVELQGVVEPQSTFQDRIQNLEIGILCR-PSAQEMYTFTVGYHELTGSKVSLKKPLLVLKKTRSVDEDQSSDIKSGNAELEV
        M+I++KC CGE +C EWA+VELQGVVE Q++FQ  IQNLEIG LC   S+Q  YTFTVGYHEL GSKV+LKKPLLVLKK       Q  ++     ELEV
Subjt:  MQIKLKCNCGETKCLEWALVELQGVVEPQSTFQDRIQNLEIGILCR-PSAQEMYTFTVGYHELTGSKVSLKKPLLVLKKTRSVDEDQSSDIKSGNAELEV

Query:  IGIIRQRILFKTRPKALIS
        +GIIR +ILFKTRPK LIS
Subjt:  IGIIRQRILFKTRPKALIS

AT5G52220.2 FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: cellular_component unknown; EXPRESSED IN: 18 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Chromosome transmission fidelity protein 8 (InterPro:IPR018607).

2.7e-36

64.71

Show/hide

Query:  MQIKLKCNCGETKCLEWALVELQGVVEPQSTFQDRIQNLEIGILCR-PSAQEMYTFTVGYHELTGSKVSLKKPLLVLKKTRSVDEDQSSDIKSGNAELEV
        M+I++KC CGE +C EWA+VELQGVVE Q++FQ  IQNLEIG LC   S+Q  YTFTVGYHEL GSKV+LKKPLLVLKK       Q  ++     ELEV
Subjt:  MQIKLKCNCGETKCLEWALVELQGVVEPQSTFQDRIQNLEIGILCR-PSAQEMYTFTVGYHELTGSKVSLKKPLLVLKKTRSVDEDQSSDIKSGNAELEV

Query:  IGIIRQRILFKTRPKALIS
        +GIIR +ILFKTRPK LIS
Subjt:  IGIIRQRILFKTRPKALIS

Sequences

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CDS sequence

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ATGCAGATTAAGCTGAAATGTAACTGTGGCGAAACCAAATGCTTGGAATGGGCCCTCGTTGAGTTACAAGGCGTAGTTGAACCTCAATCCACCTTCCAAGATCGCATTCA
AAACCTCGAAATCGGCATTCTATGTCGGCCGTCTGCTCAGGAAATGTATACTTTTACGGTAGGGTACCATGAGCTGACAGGAAGCAAAGTTTCTTTGAAGAAGCCATTGT
TGGTGTTGAAGAAAACGAGGTCTGTGGATGAGGATCAGAGTAGCGATATTAAATCGGGTAATGCAGAGTTGGAAGTGATTGGGATAATCAGGCAGCGGATTCTGTTTAAG
ACCAGACCAAAGGCACTCATATCCAAACCAGAGCCATTGGTTAAGGAAAGATCCCGTGCTTCAGGATCTGCAGTGAAAGGCCAAACAACATGA

mRNA sequence

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GTTATTTCCAAAAGAGCGGGAAGAGCTCCCTTATTTCCCGCCATTTTCCATCTTCTCGTCGGAGCTTCACAATTCTTTATGTTTTTCTCTCTCAGAGCTGAGGAACCTTA
AATCGGAAGCCGTAGAAAGATGCAGATTAAGCTGAAATGTAACTGTGGCGAAACCAAATGCTTGGAATGGGCCCTCGTTGAGTTACAAGGCGTAGTTGAACCTCAATCCA
CCTTCCAAGATCGCATTCAAAACCTCGAAATCGGCATTCTATGTCGGCCGTCTGCTCAGGAAATGTATACTTTTACGGTAGGGTACCATGAGCTGACAGGAAGCAAAGTT
TCTTTGAAGAAGCCATTGTTGGTGTTGAAGAAAACGAGGTCTGTGGATGAGGATCAGAGTAGCGATATTAAATCGGGTAATGCAGAGTTGGAAGTGATTGGGATAATCAG
GCAGCGGATTCTGTTTAAGACCAGACCAAAGGCACTCATATCCAAACCAGAGCCATTGGTTAAGGAAAGATCCCGTGCTTCAGGATCTGCAGTGAAAGGCCAAACAACAT
GA

Protein sequence

Show/hide protein sequence

MQIKLKCNCGETKCLEWALVELQGVVEPQSTFQDRIQNLEIGILCRPSAQEMYTFTVGYHELTGSKVSLKKPLLVLKKTRSVDEDQSSDIKSGNAELEVIGIIRQRILFK
TRPKALISKPEPLVKERSRASGSAVKGQTT

IVF0018700 (gene) of Melon (IVF77) v1 genome