; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

IVF0018710 (gene) of Melon (IVF77) v1 genome

Gene IDIVF0018710
OrganismCucumis melo ssp. agrestis cv. IVF77 (Melon (IVF77) v1)
DescriptionRibonuclease H
Genome locationchr03:15146168..15148464
RNA-Seq ExpressionIVF0018710
SyntenyIVF0018710
Gene Ontology termsGO:0015074 - DNA integration (biological process)
GO:0090502 - RNA phosphodiester bond hydrolysis, endonucleolytic (biological process)
GO:0030430 - host cell cytoplasm (cellular component)
GO:0003676 - nucleic acid binding (molecular function)
GO:0004523 - RNA-DNA hybrid ribonuclease activity (molecular function)
InterPro domainsIPR021109 - Aspartic peptidase domain superfamily
IPR043502 - DNA/RNA polymerase superfamily


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0033221.1 uncharacterized protein E6C27_scaffold845G00100 [Cucumis melo var. makuwa]1.42e-28479.65Show/hide
Query:  YTPDNLKDVTKEDEVRRRKGKAIEMADE---------------------------------EIPPEGTGHTKALHISVKCKDHHVARVLVDN--------
        YTPDNLKDV+KEDEVRRRKGKAIEMA E                                 EIPPEGTGHTKALHISVKCKDHHVARVLVDN        
Subjt:  YTPDNLKDVTKEDEVRRRKGKAIEMADE---------------------------------EIPPEGTGHTKALHISVKCKDHHVARVLVDN--------

Query:  ---------DPSYLRPSTMVVRAFDGARREVIGDIDIPLKIGPSTFNVSFQVMDINSSYSCLLGRPWIHSAGAVPSSLHQRLKFSVEGGQAIVYGEEDMF
                 DPSYLRPSTMVVRAFD A REVIGDIDIPLKIGPSTFNVSFQVMDINS YSCLLGRPWIHSAGAVPSSLHQRLKFSVEGGQAIVYGEEDMF
Subjt:  ---------DPSYLRPSTMVVRAFDGARREVIGDIDIPLKIGPSTFNVSFQVMDINSSYSCLLGRPWIHSAGAVPSSLHQRLKFSVEGGQAIVYGEEDMF

Query:  VTKTSVLPYVEATEEALECSYRSFEIANATIFPTEGLSMDRYVSKTSLMIAKTMIKSGFQMHKGLGKDNQGDSEVISLPKAKEKFGLGYKPVTSEWEK--
        VTKTSVLPYVEATEEALECSYRSFE ANATIFPTEGLSMDRYVSKTSLMIAKTMIKSGFQMHKGLGKDNQGDSEVISLPKAKEKFGLGYKPVTSE EK  
Subjt:  VTKTSVLPYVEATEEALECSYRSFEIANATIFPTEGLSMDRYVSKTSLMIAKTMIKSGFQMHKGLGKDNQGDSEVISLPKAKEKFGLGYKPVTSEWEK--

Query:  -----------------------------------------RKRHNEDSEISIAVVSENISLPHPLVHKCPPGFELNNWEIKKTLKVTKGSQKNTRVEGD
                                                 RKRHNEDSEI IAVVSEN SLPHPLVHKCPPGFELNNWEIKKTLKVTKGSQKNTRVEGD
Subjt:  -----------------------------------------RKRHNEDSEISIAVVSENISLPHPLVHKCPPGFELNNWEIKKTLKVTKGSQKNTRVEGD

Query:  VDDAVDFEVPICNLEQNIGEGESDISPELLRLIEREEKKTMPYQETLKVINLGTPGEVKEVRIGTLASEQDQSELVTLLHEFKDIFAWSYQDMPGLDTEI
        VDDAVDFEVPICNLEQNIGEGESDISPELLRLIE+EEKKTM YQETL VIN GTP EVKEVRIGTLASEQDQSELVTLLHEFKDIFAWSYQDM GLDTEI
Subjt:  VDDAVDFEVPICNLEQNIGEGESDISPELLRLIEREEKKTMPYQETLKVINLGTPGEVKEVRIGTLASEQDQSELVTLLHEFKDIFAWSYQDMPGLDTEI

Query:  VTHRLPLKPECKPIRQKLRKLKPEMLIKIKEEVKKQFDAGFLAVAKYPIWVANIVPFQRKTGRLE
        VTHRLPLKPECKPIRQKLRKLKPEMLIKIKEEVKKQFDAGFLAVAKYPIWVANIVP  +K G++ 
Subjt:  VTHRLPLKPECKPIRQKLRKLKPEMLIKIKEEVKKQFDAGFLAVAKYPIWVANIVPFQRKTGRLE

KAA0043020.1 uncharacterized protein E6C27_scaffold75G00990 [Cucumis melo var. makuwa]9.57e-25872.08Show/hide
Query:  MTVEIPGPFAYKDNHAVPWKYECQFITDNVV-------------YTPDNLKDVTKEDEVRRRKGKAIEMA------------------------------
        MTVEIPGPFAYKDNH VPWKYECQFITDNVV             YTPDNLKDV KEDEVRRRKGKAIEMA                              
Subjt:  MTVEIPGPFAYKDNHAVPWKYECQFITDNVV-------------YTPDNLKDVTKEDEVRRRKGKAIEMA------------------------------

Query:  -----------------DEEIPPEGTGHTKALHISVKCKDHHVARVLVDN-----------------DPSYLRPSTMVVRAFDGARREVIGDIDIPLKIG
                         DEEIPP+GTGHTKALHISVKCKDHHVARVLVDN                 DPSYLR S MVVRAFDGARREVI DIDIPLKIG
Subjt:  -----------------DEEIPPEGTGHTKALHISVKCKDHHVARVLVDN-----------------DPSYLRPSTMVVRAFDGARREVIGDIDIPLKIG

Query:  PSTFNVSFQVMDINSSYSCLLGRPWIHSAGAVPSSLHQRLKFSVEGGQAIVYGEEDMFVTKTSVLPYVEATEEALECSYRSFEIANATIFPTEGLSMDRY
        PSTFNVS QVMD+NSSYSCLLGRPWIHSAGAVPS LHQRLKFSVEGGQAIVYGE++MFVTK S LPYVEATEEALECSYRSFEIANATIFP EGLSMDRY
Subjt:  PSTFNVSFQVMDINSSYSCLLGRPWIHSAGAVPSSLHQRLKFSVEGGQAIVYGEEDMFVTKTSVLPYVEATEEALECSYRSFEIANATIFPTEGLSMDRY

Query:  VSKTSLMIAKTMIKSGFQMHKGLGKDNQGDSEVISLPKAKEKFGLGYKPVTSEWEK-------------------------------------------R
        VSKTSLMIAKTMIKS FQMHKGLGKDNQGDS+VISLPKAKEKFGLGYKP  SEWEK                                           R
Subjt:  VSKTSLMIAKTMIKSGFQMHKGLGKDNQGDSEVISLPKAKEKFGLGYKPVTSEWEK-------------------------------------------R

Query:  KRHNEDSEISIAVVSENISLPHPLVHKCPPGFELNNWEIKKTLKVTKGSQKNTRVEGDVDDAVDFEVPICNLEQNIGEGESDISPELLRLIEREEKKTMP
        KR NEDSEISIAVVSEN SL HPLVH+CPPGFELNNWEIKKTL+VTKGSQK+TRVEGDVDD VDF+VPICNLEQNI  GE DISPELLRLIE+EEKKTM 
Subjt:  KRHNEDSEISIAVVSENISLPHPLVHKCPPGFELNNWEIKKTLKVTKGSQKNTRVEGDVDDAVDFEVPICNLEQNIGEGESDISPELLRLIEREEKKTMP

Query:  YQETLKVINLGTPGEVKEVRIGTLASEQDQSELVTLLHEFKDIFAWSY
        YQETLKVINLGT  EVKEVRIGTLASEQDQSELVTLLHEFKDIFAWSY
Subjt:  YQETLKVINLGTPGEVKEVRIGTLASEQDQSELVTLLHEFKDIFAWSY

KAA0049671.1 uncharacterized protein E6C27_scaffold76G00060 [Cucumis melo var. makuwa]3.61e-20861.91Show/hide
Query:  MTVEIPGPFAYKDNHAVPWKYECQFITDNVV-------------YTPDNLKDVTKEDEVRRRKGKAIEMADE----------------------------
        MTVEIPGPFAYKDNH VPWKYECQFITDNVV             YTPDNLKDV+KEDEVRRRKGKAIEMA E                            
Subjt:  MTVEIPGPFAYKDNHAVPWKYECQFITDNVV-------------YTPDNLKDVTKEDEVRRRKGKAIEMADE----------------------------

Query:  --------------EIPPEGTGHTKALHISVKCKDHHVARVLVDN-----------------DPSYLRPSTMVVRAFDGARREVIGDIDIPLKIGPSTFN
                      EIPP+GTGHTK LHISVKCKDHHVARVLVDN                 DPSYLRPSTMVV AFDGARREVIGDIDIPLKIGPSTFN
Subjt:  --------------EIPPEGTGHTKALHISVKCKDHHVARVLVDN-----------------DPSYLRPSTMVVRAFDGARREVIGDIDIPLKIGPSTFN

Query:  VSFQVMDINSSYSCLLGRPWIHSAGAVPSSLHQRLKFSVEGGQAIVYGEEDMFVTKTSVLPYVEATEEALECSYRSFEIANATIFPTEGLSMDRYVSKTS
        VSFQVMD+NSSY+ LLG+PWIHSAGAVPSSLHQRLKFS+EGGQAIVYGE+DMFVTKTS LPYVEA EEALE S   F           GL      S+  
Subjt:  VSFQVMDINSSYSCLLGRPWIHSAGAVPSSLHQRLKFSVEGGQAIVYGEEDMFVTKTSVLPYVEATEEALECSYRSFEIANATIFPTEGLSMDRYVSKTS

Query:  LMIAKTMIKSGFQMHKGLGKDNQGDSEVISLPKAKEKFGLGYKPVTSEWEKRKRHNEDSEISIAVVSENISLPHPLVHKCPPGFELNNWEIKKTLKVTKG
         + AK   K    +   +G++ +   E I++P   E F  G   +  +  +RKR N+DS+I IAV+SEN  L HPLVH+C P FELNNWEIKKTL+VT  
Subjt:  LMIAKTMIKSGFQMHKGLGKDNQGDSEVISLPKAKEKFGLGYKPVTSEWEKRKRHNEDSEISIAVVSENISLPHPLVHKCPPGFELNNWEIKKTLKVTKG

Query:  SQKNTRVEGDVDDAVDFEVPICNLEQNIGEGESDISPELLRLIEREEKKTMPYQETLKVINLGTPGEVKEVRIGTLASEQDQSELVTLLHEFKDIFAWSY
          ++TRVEGDVDDA+DFEVPICNLEQNI EGE D SPELLRLIE+EEKKTMPYQETLKVINLGT  EVK+VRIGTLAS+QDQ +LVTLLHEFKDI AWSY
Subjt:  SQKNTRVEGDVDDAVDFEVPICNLEQNIGEGESDISPELLRLIEREEKKTMPYQETLKVINLGTPGEVKEVRIGTLASEQDQSELVTLLHEFKDIFAWSY

Query:  QDMPGLDTEIVTHRLPLKPECKPIRQKLRKLKPEMLIKIKEEVKKQFDAGFLAVAKYPIWVANIVPFQRKTGRLE
        QDMPGLDTEI                            IKEEVKKQFDAGFLAV KY IWVANIVP  +K  ++ 
Subjt:  QDMPGLDTEIVTHRLPLKPECKPIRQKLRKLKPEMLIKIKEEVKKQFDAGFLAVAKYPIWVANIVPFQRKTGRLE

KAA0065293.1 uncharacterized protein E6C27_scaffold1023G00060 [Cucumis melo var. makuwa]1.39e-27565.7Show/hide
Query:  MTVEIPGPFAYKDNHAVPWKYECQFITDNVV-------------YTPDNLKDVTKEDEVRRRKGKAIEMA------------------------------
        MTVEIPGPFAYKDNHAVPWKYECQFITDNVV             YTPDNLKDV+KEDEVRRRKGKAIEMA                              
Subjt:  MTVEIPGPFAYKDNHAVPWKYECQFITDNVV-------------YTPDNLKDVTKEDEVRRRKGKAIEMA------------------------------

Query:  ------------------------------------------------------------------------------DEEIPPEGTGHTKALHISVKCK
                                                                                      DEEIPPEGTGHTKALHISVKCK
Subjt:  ------------------------------------------------------------------------------DEEIPPEGTGHTKALHISVKCK

Query:  DHHVARVLVDN-----------------DPSYLRPSTMVVRAFDGARREVIGDIDIPLKIGPSTFNVSFQVMDINSSYSCLLGRPWIHSAGAVPSSLHQR
        DHHVARVLVDN                 DPSYLRPSTMVVRAFDGARREVIGDIDIPLKIGPSTFNVSFQVMDINSSYSCLLGRPWIHSAGAVPSSLHQ 
Subjt:  DHHVARVLVDN-----------------DPSYLRPSTMVVRAFDGARREVIGDIDIPLKIGPSTFNVSFQVMDINSSYSCLLGRPWIHSAGAVPSSLHQR

Query:  LKFSVEGGQAIVYGEEDMFVTKTSVLPYVEATEEALECSYRSFEIANATIFPTEGLSMDRYVSKTSLMIAKTMIKSGFQMHKGLGKDNQGDSEVISLPKA
                                      +   +  CSYRSFEIANATIFPTEGLSMDRYVSKTSLMIAKTMIKSGFQMHKGLGKDNQGDSEVISLPKA
Subjt:  LKFSVEGGQAIVYGEEDMFVTKTSVLPYVEATEEALECSYRSFEIANATIFPTEGLSMDRYVSKTSLMIAKTMIKSGFQMHKGLGKDNQGDSEVISLPKA

Query:  KEKFGLGYKPVTSEWEK-------------------------------------------RKRHNEDSEISIAVVSENISLPHPLVHKCPPGFELNNWEI
        KEKFGLGYKPVTSEWEK                                           RKRHNEDSEISI VVSEN SLPHPLVHKCPPGFELNNWEI
Subjt:  KEKFGLGYKPVTSEWEK-------------------------------------------RKRHNEDSEISIAVVSENISLPHPLVHKCPPGFELNNWEI

Query:  KKTLKVTKGSQK----NTRVEGDVDDAVDFEVPICNLEQNIGEGESDISPELLRLIEREEKKTMPYQETLKVINLGTPGEVKEVRIGTLASEQDQSELVT
        KKTLKVTKGSQK    NTRVEGDVDD VDFEVPICNLEQNIGEGESDISPELLRLIE+EEKKTMPYQETLKVINLGTP EVKEVRIGTLASEQDQSELVT
Subjt:  KKTLKVTKGSQK----NTRVEGDVDDAVDFEVPICNLEQNIGEGESDISPELLRLIEREEKKTMPYQETLKVINLGTPGEVKEVRIGTLASEQDQSELVT

Query:  LLHEFKDIFAWSYQDMPGLDTEIVTHRLPLKPECKPIRQKLRKLKPEMLIKIKEEVKKQFDAGFLAVAKYPIWVANIVPFQRKTGRLE
        LLHEFKDIFAWSYQDMPGLDTEIVTHRLPLKPECKPIRQKLRKLKPEMLIKIKEEVKKQFDAGFLAVAKYPIWVANIVP  +K G++ 
Subjt:  LLHEFKDIFAWSYQDMPGLDTEIVTHRLPLKPECKPIRQKLRKLKPEMLIKIKEEVKKQFDAGFLAVAKYPIWVANIVPFQRKTGRLE

TYK06500.1 uncharacterized protein E5676_scaffold70G00280 [Cucumis melo var. makuwa]2.38e-26084.03Show/hide
Query:  TVEIPGPFAYKDNHAVPWKYECQFITDNVV-------------YTPDNLKDVTKEDEVRRRKGKAIEMADEEIPPEGTGHTKALHISVKCKDHHVARVLV
        ++E   PFAYKDNH VPWKYECQFITDNVV             YTPDNLKDV+KEDEVRRRKGKAIEMADEEIPPEGTGHTKAL+ISVKCKDHHVARVLV
Subjt:  TVEIPGPFAYKDNHAVPWKYECQFITDNVV-------------YTPDNLKDVTKEDEVRRRKGKAIEMADEEIPPEGTGHTKALHISVKCKDHHVARVLV

Query:  DN-----------------DPSYLRPSTMVVRAFDGARREVIGDIDIPLKIGPSTFNVSFQVMDINSSYSCLLGRPWIHSAGAVPSSLHQRLKFSVEGGQ
        DN                 DP YLRPS MVVRAFD ARREVIGDIDIPLKIGPSTFNVS QV+D+NSSYSCLLGRPWIHSAG VPS LHQRLKFSVEGGQ
Subjt:  DN-----------------DPSYLRPSTMVVRAFDGARREVIGDIDIPLKIGPSTFNVSFQVMDINSSYSCLLGRPWIHSAGAVPSSLHQRLKFSVEGGQ

Query:  AIVYGEEDMFVTKTSVLPYVEATEEALECSYRSFEIANATIFPTEGLSMDRYVSKTSLMIAKTMIKSGFQMHKGLGKDNQGDSEVISLPKAKEKFGLGYK
        AIVYGE++MFVTKTS LPYVEATEEALECSYRSFEIANATIFP EGLSMDRYVSKTSLMI KTMIKS FQMHKGLGKDNQ DS+VISLPKAKEKFGLGYK
Subjt:  AIVYGEEDMFVTKTSVLPYVEATEEALECSYRSFEIANATIFPTEGLSMDRYVSKTSLMIAKTMIKSGFQMHKGLGKDNQGDSEVISLPKAKEKFGLGYK

Query:  PVTSEWEKRKRHNEDSEISIAVVSENISLPHPLVHKCPPGFELNNWEIKKTLKVTKGSQKNTRVEGDVDDAVDFEVPICNLEQNIGEGESDISPELLRLI
        P  SEWEKRKR NEDSEISIAVVSEN SL HPLVH+C PGFELNNWEIKKTL+VTKGSQK+TRVEGDVDD VDF+VPICNLEQNI  GESDISPELLRLI
Subjt:  PVTSEWEKRKRHNEDSEISIAVVSENISLPHPLVHKCPPGFELNNWEIKKTLKVTKGSQKNTRVEGDVDDAVDFEVPICNLEQNIGEGESDISPELLRLI

Query:  EREEKKTMPYQETLKVINLGTPGEVKEVRIGTLASEQDQSELVTLLHEFKDIFAWSY
        E+EEKKTM YQETLKVINLGT  EVKEVRIGTLASEQ QS+LVTLLHEFKDIFAWSY
Subjt:  EREEKKTMPYQETLKVINLGTPGEVKEVRIGTLASEQDQSELVTLLHEFKDIFAWSY

TrEMBL top hitse value%identityAlignment
A0A5A7SUT0 Reverse transcriptase3.6e-24379.79Show/hide
Query:  YTPDNLKDVTKEDEVRRRKGKAIEMAD---------------------------------EEIPPEGTGHTKALHISVKCKDHHVARVLVDN--------
        YTPDNLKDV+KEDEVRRRKGKAIEMA                                  EEIPPEGTGHTKALHISVKCKDHHVARVLVDN        
Subjt:  YTPDNLKDVTKEDEVRRRKGKAIEMAD---------------------------------EEIPPEGTGHTKALHISVKCKDHHVARVLVDN--------

Query:  ---------DPSYLRPSTMVVRAFDGARREVIGDIDIPLKIGPSTFNVSFQVMDINSSYSCLLGRPWIHSAGAVPSSLHQRLKFSVEGGQAIVYGEEDMF
                 DPSYLRPSTMVVRAFD A REVIGDIDIPLKIGPSTFNVSFQVMDINS YSCLLGRPWIHSAGAVPSSLHQRLKFSVEGGQAIVYGEEDMF
Subjt:  ---------DPSYLRPSTMVVRAFDGARREVIGDIDIPLKIGPSTFNVSFQVMDINSSYSCLLGRPWIHSAGAVPSSLHQRLKFSVEGGQAIVYGEEDMF

Query:  VTKTSVLPYVEATEEALECSYRSFEIANATIFPTEGLSMDRYVSKTSLMIAKTMIKSGFQMHKGLGKDNQGDSEVISLPKAKEKFGLGYKPVTSEWEK--
        VTKTSVLPYVEATEEALECSYRSFE ANATIFPTEGLSMDRYVSKTSLMIAKTMIKSGFQMHKGLGKDNQGDSEVISLPKAKEKFGLGYKPVTSE EK  
Subjt:  VTKTSVLPYVEATEEALECSYRSFEIANATIFPTEGLSMDRYVSKTSLMIAKTMIKSGFQMHKGLGKDNQGDSEVISLPKAKEKFGLGYKPVTSEWEK--

Query:  -----------------------------------------RKRHNEDSEISIAVVSENISLPHPLVHKCPPGFELNNWEIKKTLKVTKGSQKNTRVEGD
                                                 RKRHNEDSEI IAVVSEN SLPHPLVHKCPPGFELNNWEIKKTLKVTKGSQKNTRVEGD
Subjt:  -----------------------------------------RKRHNEDSEISIAVVSENISLPHPLVHKCPPGFELNNWEIKKTLKVTKGSQKNTRVEGD

Query:  VDDAVDFEVPICNLEQNIGEGESDISPELLRLIEREEKKTMPYQETLKVINLGTPGEVKEVRIGTLASEQDQSELVTLLHEFKDIFAWSYQDMPGLDTEI
        VDDAVDFEVPICNLEQNIGEGESDISPELLRLIE+EEKKTM YQETL VIN GTP EVKEVRIGTLASEQDQSELVTLLHEFKDIFAWSYQDM GLDTEI
Subjt:  VDDAVDFEVPICNLEQNIGEGESDISPELLRLIEREEKKTMPYQETLKVINLGTPGEVKEVRIGTLASEQDQSELVTLLHEFKDIFAWSYQDMPGLDTEI

Query:  VTHRLPLKPECKPIRQKLRKLKPEMLIKIKEEVKKQFDAGFLAVAKYPIWVANIVPFQRKTGRL
        VTHRLPLKPECKPIRQKLRKLKPEMLIKIKEEVKKQFDAGFLAVAKYPIWVANIVP  +K G++
Subjt:  VTHRLPLKPECKPIRQKLRKLKPEMLIKIKEEVKKQFDAGFLAVAKYPIWVANIVPFQRKTGRL

A0A5A7TI68 Uncharacterized protein6.3e-20872.08Show/hide
Query:  MTVEIPGPFAYKDNHAVPWKYECQFITDNVV-------------YTPDNLKDVTKEDEVRRRKGKAIEMA------------------------------
        MTVEIPGPFAYKDNH VPWKYECQFITDNVV             YTPDNLKDV KEDEVRRRKGKAIEMA                              
Subjt:  MTVEIPGPFAYKDNHAVPWKYECQFITDNVV-------------YTPDNLKDVTKEDEVRRRKGKAIEMA------------------------------

Query:  -----------------DEEIPPEGTGHTKALHISVKCKDHHVARVLVDN-----------------DPSYLRPSTMVVRAFDGARREVIGDIDIPLKIG
                         DEEIPP+GTGHTKALHISVKCKDHHVARVLVDN                 DPSYLR S MVVRAFDGARREVI DIDIPLKIG
Subjt:  -----------------DEEIPPEGTGHTKALHISVKCKDHHVARVLVDN-----------------DPSYLRPSTMVVRAFDGARREVIGDIDIPLKIG

Query:  PSTFNVSFQVMDINSSYSCLLGRPWIHSAGAVPSSLHQRLKFSVEGGQAIVYGEEDMFVTKTSVLPYVEATEEALECSYRSFEIANATIFPTEGLSMDRY
        PSTFNVS QVMD+NSSYSCLLGRPWIHSAGAVPS LHQRLKFSVEGGQAIVYGE++MFVTK S LPYVEATEEALECSYRSFEIANATIFP EGLSMDRY
Subjt:  PSTFNVSFQVMDINSSYSCLLGRPWIHSAGAVPSSLHQRLKFSVEGGQAIVYGEEDMFVTKTSVLPYVEATEEALECSYRSFEIANATIFPTEGLSMDRY

Query:  VSKTSLMIAKTMIKSGFQMHKGLGKDNQGDSEVISLPKAKEKFGLGYKPVTSEWEK-------------------------------------------R
        VSKTSLMIAKTMIKS FQMHKGLGKDNQGDS+VISLPKAKEKFGLGYKP  SEWEK                                           R
Subjt:  VSKTSLMIAKTMIKSGFQMHKGLGKDNQGDSEVISLPKAKEKFGLGYKPVTSEWEK-------------------------------------------R

Query:  KRHNEDSEISIAVVSENISLPHPLVHKCPPGFELNNWEIKKTLKVTKGSQKNTRVEGDVDDAVDFEVPICNLEQNIGEGESDISPELLRLIEREEKKTMP
        KR NEDSEISIAVVSEN SL HPLVH+CPPGFELNNWEIKKTL+VTKGSQK+TRVEGDVDD VDF+VPICNLEQNI  GE DISPELLRLIE+EEKKTM 
Subjt:  KRHNEDSEISIAVVSENISLPHPLVHKCPPGFELNNWEIKKTLKVTKGSQKNTRVEGDVDDAVDFEVPICNLEQNIGEGESDISPELLRLIEREEKKTMP

Query:  YQETLKVINLGTPGEVKEVRIGTLASEQDQSELVTLLHEFKDIFAWSY
        YQETLKVINLGT  EVKEVRIGTLASEQDQSELVTLLHEFKDIFAWSY
Subjt:  YQETLKVINLGTPGEVKEVRIGTLASEQDQSELVTLLHEFKDIFAWSY

A0A5A7U7X5 Ribonuclease H6.4e-17662.46Show/hide
Query:  MTVEIPGPFAYKDNHAVPWKYECQFITDNVV-------------YTPDNLKDVTKEDEVRRRKGKAIEMADE----------------------------
        MTVEIPGPFAYKDNH VPWKYECQFITDNVV             YTPDNLKDV+KEDEVRRRKGKAIEMA E                            
Subjt:  MTVEIPGPFAYKDNHAVPWKYECQFITDNVV-------------YTPDNLKDVTKEDEVRRRKGKAIEMADE----------------------------

Query:  --------------EIPPEGTGHTKALHISVKCKDHHVARVLVDN-----------------DPSYLRPSTMVVRAFDGARREVIGDIDIPLKIGPSTFN
                      EIPP+GTGHTK LHISVKCKDHHVARVLVDN                 DPSYLRPSTMVV AFDGARREVIGDIDIPLKIGPSTFN
Subjt:  --------------EIPPEGTGHTKALHISVKCKDHHVARVLVDN-----------------DPSYLRPSTMVVRAFDGARREVIGDIDIPLKIGPSTFN

Query:  VSFQVMDINSSYSCLLGRPWIHSAGAVPSSLHQRLKFSVEGGQAIVYGEEDMFVTKTSVLPYVEATEEALECSYRSFEIANATIFPTEGLSMDRYVSKTS
        VSFQVMD+NSSY+ LLG+PWIHSAGAVPSSLHQRLKFS+EGGQAIVYGE+DMFVTKTS LPYVEA EEALE S   F           GL      S+  
Subjt:  VSFQVMDINSSYSCLLGRPWIHSAGAVPSSLHQRLKFSVEGGQAIVYGEEDMFVTKTSVLPYVEATEEALECSYRSFEIANATIFPTEGLSMDRYVSKTS

Query:  LMIAKTMIKSGFQMHKGLGKDNQGDSEVISLPKAKEKFGLGYKPVTSEWEKRKRHNEDSEISIAVVSENISLPHPLVHKCPPGFELNNWEIKKTLKVTKG
         + AK   K    +   +G++ +   E I++P   E F  G   +  +  +RKR N+DS+I IAV+SEN  L HPLVH+C P FELNNWEIKKTL+VT  
Subjt:  LMIAKTMIKSGFQMHKGLGKDNQGDSEVISLPKAKEKFGLGYKPVTSEWEKRKRHNEDSEISIAVVSENISLPHPLVHKCPPGFELNNWEIKKTLKVTKG

Query:  SQKNTRVEGDVDDAVDFEVPICNLEQNIGEGESDISPELLRLIEREEKKTMPYQETLKVINLGTPGEVKEVRIGTLASEQDQSELVTLLHEFKDIFAWSY
          ++TRVEGDVDDA+DFEVPICNLEQNI EGE D SPELLRLIE+EEKKTMPYQETLKVINLGT  EVK+VRIGTLAS+QDQ +LVTLLHEFKDI AWSY
Subjt:  SQKNTRVEGDVDDAVDFEVPICNLEQNIGEGESDISPELLRLIEREEKKTMPYQETLKVINLGTPGEVKEVRIGTLASEQDQSELVTLLHEFKDIFAWSY

Query:  QDMPGLDTEIVTHRLPLKPECKPIRQKLRKLKPEMLIKIKEEVKKQFDAGFLAVAKYPIWVANIVPFQRK
        QDMPGLDTEI                            IKEEVKKQFDAGFLAV KY IWVANIVP  +K
Subjt:  QDMPGLDTEIVTHRLPLKPECKPIRQKLRKLKPEMLIKIKEEVKKQFDAGFLAVAKYPIWVANIVPFQRK

A0A5A7VAU5 Uncharacterized protein4.8e-23265.79Show/hide
Query:  MTVEIPGPFAYKDNHAVPWKYECQFITDNVV-------------YTPDNLKDVTKEDEVRRRKGKAIEMA------------------------------
        MTVEIPGPFAYKDNHAVPWKYECQFITDNVV             YTPDNLKDV+KEDEVRRRKGKAIEMA                              
Subjt:  MTVEIPGPFAYKDNHAVPWKYECQFITDNVV-------------YTPDNLKDVTKEDEVRRRKGKAIEMA------------------------------

Query:  ------------------------------------------------------------------------------DEEIPPEGTGHTKALHISVKCK
                                                                                      DEEIPPEGTGHTKALHISVKCK
Subjt:  ------------------------------------------------------------------------------DEEIPPEGTGHTKALHISVKCK

Query:  DHHVARVLVDN-----------------DPSYLRPSTMVVRAFDGARREVIGDIDIPLKIGPSTFNVSFQVMDINSSYSCLLGRPWIHSAGAVPSSLHQR
        DHHVARVLVDN                 DPSYLRPSTMVVRAFDGARREVIGDIDIPLKIGPSTFNVSFQVMDINSSYSCLLGRPWIHSAGAVPSSLHQ 
Subjt:  DHHVARVLVDN-----------------DPSYLRPSTMVVRAFDGARREVIGDIDIPLKIGPSTFNVSFQVMDINSSYSCLLGRPWIHSAGAVPSSLHQR

Query:  LKFSVEGGQAIVYGEEDMFVTKTSVLPYVEATEEALECSYRSFEIANATIFPTEGLSMDRYVSKTSLMIAKTMIKSGFQMHKGLGKDNQGDSEVISLPKA
                                      +   +  CSYRSFEIANATIFPTEGLSMDRYVSKTSLMIAKTMIKSGFQMHKGLGKDNQGDSEVISLPKA
Subjt:  LKFSVEGGQAIVYGEEDMFVTKTSVLPYVEATEEALECSYRSFEIANATIFPTEGLSMDRYVSKTSLMIAKTMIKSGFQMHKGLGKDNQGDSEVISLPKA

Query:  KEKFGLGYKPVTSEWEK-------------------------------------------RKRHNEDSEISIAVVSENISLPHPLVHKCPPGFELNNWEI
        KEKFGLGYKPVTSEWEK                                           RKRHNEDSEISI VVSEN SLPHPLVHKCPPGFELNNWEI
Subjt:  KEKFGLGYKPVTSEWEK-------------------------------------------RKRHNEDSEISIAVVSENISLPHPLVHKCPPGFELNNWEI

Query:  KKTLKVTKGSQK----NTRVEGDVDDAVDFEVPICNLEQNIGEGESDISPELLRLIEREEKKTMPYQETLKVINLGTPGEVKEVRIGTLASEQDQSELVT
        KKTLKVTKGSQK    NTRVEGDVDD VDFEVPICNLEQNIGEGESDISPELLRLIE+EEKKTMPYQETLKVINLGTP EVKEVRIGTLASEQDQSELVT
Subjt:  KKTLKVTKGSQK----NTRVEGDVDDAVDFEVPICNLEQNIGEGESDISPELLRLIEREEKKTMPYQETLKVINLGTPGEVKEVRIGTLASEQDQSELVT

Query:  LLHEFKDIFAWSYQDMPGLDTEIVTHRLPLKPECKPIRQKLRKLKPEMLIKIKEEVKKQFDAGFLAVAKYPIWVANIVPFQRKTGRL
        LLHEFKDIFAWSYQDMPGLDTEIVTHRLPLKPECKPIRQKLRKLKPEMLIKIKEEVKKQFDAGFLAVAKYPIWVANIVP  +K G++
Subjt:  LLHEFKDIFAWSYQDMPGLDTEIVTHRLPLKPECKPIRQKLRKLKPEMLIKIKEEVKKQFDAGFLAVAKYPIWVANIVPFQRKTGRL

A0A5D3C587 Retrotrans_gag domain-containing protein1.7e-21384.92Show/hide
Query:  PFAYKDNHAVPWKYECQFITDNVV-------------YTPDNLKDVTKEDEVRRRKGKAIEMADEEIPPEGTGHTKALHISVKCKDHHVARVLVDN----
        PFAYKDNH VPWKYECQFITDNVV             YTPDNLKDV+KEDEVRRRKGKAIEMADEEIPPEGTGHTKAL+ISVKCKDHHVARVLVDN    
Subjt:  PFAYKDNHAVPWKYECQFITDNVV-------------YTPDNLKDVTKEDEVRRRKGKAIEMADEEIPPEGTGHTKALHISVKCKDHHVARVLVDN----

Query:  -------------DPSYLRPSTMVVRAFDGARREVIGDIDIPLKIGPSTFNVSFQVMDINSSYSCLLGRPWIHSAGAVPSSLHQRLKFSVEGGQAIVYGE
                     DP YLRPS MVVRAFD ARREVIGDIDIPLKIGPSTFNVS QV+D+NSSYSCLLGRPWIHSAG VPS LHQRLKFSVEGGQAIVYGE
Subjt:  -------------DPSYLRPSTMVVRAFDGARREVIGDIDIPLKIGPSTFNVSFQVMDINSSYSCLLGRPWIHSAGAVPSSLHQRLKFSVEGGQAIVYGE

Query:  EDMFVTKTSVLPYVEATEEALECSYRSFEIANATIFPTEGLSMDRYVSKTSLMIAKTMIKSGFQMHKGLGKDNQGDSEVISLPKAKEKFGLGYKPVTSEW
        ++MFVTKTS LPYVEATEEALECSYRSFEIANATIFP EGLSMDRYVSKTSLMI KTMIKS FQMHKGLGKDNQ DS+VISLPKAKEKFGLGYKP  SEW
Subjt:  EDMFVTKTSVLPYVEATEEALECSYRSFEIANATIFPTEGLSMDRYVSKTSLMIAKTMIKSGFQMHKGLGKDNQGDSEVISLPKAKEKFGLGYKPVTSEW

Query:  EKRKRHNEDSEISIAVVSENISLPHPLVHKCPPGFELNNWEIKKTLKVTKGSQKNTRVEGDVDDAVDFEVPICNLEQNIGEGESDISPELLRLIEREEKK
        EKRKR NEDSEISIAVVSEN SL HPLVH+C PGFELNNWEIKKTL+VTKGSQK+TRVEGDVDD VDF+VPICNLEQNI  GESDISPELLRLIE+EEKK
Subjt:  EKRKRHNEDSEISIAVVSENISLPHPLVHKCPPGFELNNWEIKKTLKVTKGSQKNTRVEGDVDDAVDFEVPICNLEQNIGEGESDISPELLRLIEREEKK

Query:  TMPYQETLKVINLGTPGEVKEVRIGTLASEQDQSELVTLLHEFKDIFAWSY
        TM YQETLKVINLGT  EVKEVRIGTLASEQ QS+LVTLLHEFKDIFAWSY
Subjt:  TMPYQETLKVINLGTPGEVKEVRIGTLASEQDQSELVTLLHEFKDIFAWSY

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGACAGTTGAAATACCAGGTCCTTTTGCTTATAAGGATAACCATGCCGTTCCATGGAAATATGAATGTCAGTTCATCACGGACAATGTCGTGTATACACCAGATAATTT
AAAAGATGTCACTAAGGAGGATGAAGTTCGACGACGTAAAGGAAAAGCTATAGAAATGGCAGATGAAGAAATTCCCCCTGAAGGTACTGGACATACTAAGGCATTACACA
TATCTGTGAAGTGTAAGGACCATCACGTGGCGAGGGTTCTGGTAGATAATGATCCATCGTACCTAAGACCAAGTACTATGGTTGTAAGAGCCTTTGACGGTGCACGTAGA
GAAGTAATCGGGGATATAGATATCCCATTAAAAATTGGGCCTTCCACTTTCAATGTTTCATTCCAAGTAATGGATATAAATTCCTCATACAGTTGTTTACTGGGGCGACC
TTGGATTCATTCAGCAGGGGCAGTCCCATCTTCACTACACCAAAGGTTGAAATTTAGTGTAGAAGGTGGTCAAGCTATTGTTTATGGAGAAGAGGACATGTTTGTAACAA
AAACATCAGTACTTCCTTATGTTGAAGCAACGGAAGAAGCTCTGGAATGTTCTTATAGATCGTTTGAAATTGCTAATGCTACTATATTTCCGACAGAAGGTTTGAGCATG
GACCGTTATGTGTCTAAGACATCTCTAATGATTGCAAAGACAATGATCAAAAGTGGTTTCCAAATGCATAAGGGACTGGGAAAAGATAATCAAGGGGACTCGGAAGTGAT
TTCTCTTCCTAAAGCCAAGGAAAAGTTTGGTTTGGGCTATAAGCCAGTAACTTCTGAATGGGAGAAGAGAAAAAGACATAACGAAGATTCTGAGATCTCGATTGCAGTTG
TATCCGAGAATATTAGTCTGCCTCATCCTTTGGTTCATAAGTGTCCGCCAGGATTTGAGTTGAACAATTGGGAGATCAAGAAGACATTGAAAGTCACTAAGGGATCACAA
AAGAACACCAGAGTGGAAGGTGACGTTGATGACGCTGTTGATTTCGAAGTTCCAATTTGTAATCTTGAGCAAAATATTGGAGAGGGTGAATCTGATATATCACCTGAATT
ACTAAGATTGATAGAGCGAGAAGAAAAGAAAACTATGCCATATCAAGAAACTTTGAAGGTTATTAATTTGGGAACACCGGGAGAAGTGAAAGAAGTGCGAATTGGCACTT
TGGCCTCGGAGCAAGATCAATCAGAGCTGGTGACCCTACTTCACGAGTTTAAAGATATATTTGCATGGTCTTACCAGGATATGCCCGGTTTGGATACAGAAATTGTAACA
CATCGATTACCACTCAAACCAGAATGTAAGCCTATACGACAAAAGCTTCGCAAATTGAAACCTGAAATGTTGATAAAGATCAAGGAGGAAGTTAAAAAGCAGTTTGATGC
TGGATTCTTAGCAGTAGCAAAATACCCAATTTGGGTTGCAAATATTGTCCCGTTCCAAAGAAAGACGGGAAGGTTAGAATGTGCGTAG
mRNA sequenceShow/hide mRNA sequence
ATGACAGTTGAAATACCAGGTCCTTTTGCTTATAAGGATAACCATGCCGTTCCATGGAAATATGAATGTCAGTTCATCACGGACAATGTCGTGTATACACCAGATAATTT
AAAAGATGTCACTAAGGAGGATGAAGTTCGACGACGTAAAGGAAAAGCTATAGAAATGGCAGATGAAGAAATTCCCCCTGAAGGTACTGGACATACTAAGGCATTACACA
TATCTGTGAAGTGTAAGGACCATCACGTGGCGAGGGTTCTGGTAGATAATGATCCATCGTACCTAAGACCAAGTACTATGGTTGTAAGAGCCTTTGACGGTGCACGTAGA
GAAGTAATCGGGGATATAGATATCCCATTAAAAATTGGGCCTTCCACTTTCAATGTTTCATTCCAAGTAATGGATATAAATTCCTCATACAGTTGTTTACTGGGGCGACC
TTGGATTCATTCAGCAGGGGCAGTCCCATCTTCACTACACCAAAGGTTGAAATTTAGTGTAGAAGGTGGTCAAGCTATTGTTTATGGAGAAGAGGACATGTTTGTAACAA
AAACATCAGTACTTCCTTATGTTGAAGCAACGGAAGAAGCTCTGGAATGTTCTTATAGATCGTTTGAAATTGCTAATGCTACTATATTTCCGACAGAAGGTTTGAGCATG
GACCGTTATGTGTCTAAGACATCTCTAATGATTGCAAAGACAATGATCAAAAGTGGTTTCCAAATGCATAAGGGACTGGGAAAAGATAATCAAGGGGACTCGGAAGTGAT
TTCTCTTCCTAAAGCCAAGGAAAAGTTTGGTTTGGGCTATAAGCCAGTAACTTCTGAATGGGAGAAGAGAAAAAGACATAACGAAGATTCTGAGATCTCGATTGCAGTTG
TATCCGAGAATATTAGTCTGCCTCATCCTTTGGTTCATAAGTGTCCGCCAGGATTTGAGTTGAACAATTGGGAGATCAAGAAGACATTGAAAGTCACTAAGGGATCACAA
AAGAACACCAGAGTGGAAGGTGACGTTGATGACGCTGTTGATTTCGAAGTTCCAATTTGTAATCTTGAGCAAAATATTGGAGAGGGTGAATCTGATATATCACCTGAATT
ACTAAGATTGATAGAGCGAGAAGAAAAGAAAACTATGCCATATCAAGAAACTTTGAAGGTTATTAATTTGGGAACACCGGGAGAAGTGAAAGAAGTGCGAATTGGCACTT
TGGCCTCGGAGCAAGATCAATCAGAGCTGGTGACCCTACTTCACGAGTTTAAAGATATATTTGCATGGTCTTACCAGGATATGCCCGGTTTGGATACAGAAATTGTAACA
CATCGATTACCACTCAAACCAGAATGTAAGCCTATACGACAAAAGCTTCGCAAATTGAAACCTGAAATGTTGATAAAGATCAAGGAGGAAGTTAAAAAGCAGTTTGATGC
TGGATTCTTAGCAGTAGCAAAATACCCAATTTGGGTTGCAAATATTGTCCCGTTCCAAAGAAAGACGGGAAGGTTAGAATGTGCGTAG
Protein sequenceShow/hide protein sequence
MTVEIPGPFAYKDNHAVPWKYECQFITDNVVYTPDNLKDVTKEDEVRRRKGKAIEMADEEIPPEGTGHTKALHISVKCKDHHVARVLVDNDPSYLRPSTMVVRAFDGARR
EVIGDIDIPLKIGPSTFNVSFQVMDINSSYSCLLGRPWIHSAGAVPSSLHQRLKFSVEGGQAIVYGEEDMFVTKTSVLPYVEATEEALECSYRSFEIANATIFPTEGLSM
DRYVSKTSLMIAKTMIKSGFQMHKGLGKDNQGDSEVISLPKAKEKFGLGYKPVTSEWEKRKRHNEDSEISIAVVSENISLPHPLVHKCPPGFELNNWEIKKTLKVTKGSQ
KNTRVEGDVDDAVDFEVPICNLEQNIGEGESDISPELLRLIEREEKKTMPYQETLKVINLGTPGEVKEVRIGTLASEQDQSELVTLLHEFKDIFAWSYQDMPGLDTEIVT
HRLPLKPECKPIRQKLRKLKPEMLIKIKEEVKKQFDAGFLAVAKYPIWVANIVPFQRKTGRLECA