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IVF0018731 (gene) of Melon (IVF77) v1 genome

Gene IDIVF0018731
OrganismCucumis melo ssp. agrestis cv. IVF77 (Melon (IVF77) v1)
Description60S ribosomal protein L36
Genome locationchr12:175014..175393
RNA-Seq ExpressionIVF0018731
SyntenyIVF0018731
Gene Ontology termsGO:0002181 - cytoplasmic translation (biological process)
GO:0022625 - cytosolic large ribosomal subunit (cellular component)
GO:0003735 - structural constituent of ribosome (molecular function)
InterPro domainsIPR000509 - Ribosomal protein L36e
IPR038097 - Ribosomal protein L36e domain superfamily


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAG8476307.1 hypothetical protein CXB51_033094 [Gossypium anomalum]4.36e-3665.55Show/hide
Query:  WLSSRQEGNGSKQPNTGLFVGLNKGHIVRKKELAPLPTHPRGKSSKI------------------KRITELLKVGKDKRALKVAKRKLGIHKRAKKKREE
        WL   + G  +KQPNTGLFVGLNKGH+V KKELAP P++ +GK+SK                   KRITELLKVGKDKRALKVAKRKLG HKRAKKKREE
Subjt:  WLSSRQEGNGSKQPNTGLFVGLNKGHIVRKKELAPLPTHPRGKSSKI------------------KRITELLKVGKDKRALKVAKRKLGIHKRAKKKREE

Query:  MSSVLRNVRA-GAGAKKKK
        MSSVLR +RA G GA+KKK
Subjt:  MSSVLRNVRA-GAGAKKKK

XP_004140771.1 60S ribosomal protein L36-2 [Cucumis sativus]4.32e-3671.96Show/hide
Query:  KQPNTGLFVGLNKGHIVRKKELAPLPTHPRGKSSKI------------------KRITELLKVGKDKRALKVAKRKLGIHKRAKKKREEMSSVLRNVRAG
        KQPNTGLFVGLNKGHIV KKELAP P+  +GKSSK                   KRITELLKVGKDKRALKVAKRKLG HKRAKKKREEMSSVLR +RAG
Subjt:  KQPNTGLFVGLNKGHIVRKKELAPLPTHPRGKSSKI------------------KRITELLKVGKDKRALKVAKRKLGIHKRAKKKREEMSSVLRNVRAG

Query:  AGAKKKK
         GA+KKK
Subjt:  AGAKKKK

XP_022013305.1 60S ribosomal protein L36-2 [Helianthus annuus]1.76e-3570.09Show/hide
Query:  KQPNTGLFVGLNKGHIVRKKELAPLPTHPRGKSSKI------------------KRITELLKVGKDKRALKVAKRKLGIHKRAKKKREEMSSVLRNVRAG
        KQPNTGLFVGLNKGH+V KKELAP P+  +GK+SK                   KRITELLKVGKDKRALKVAKRKLG HKRAKKKREEMSSVLR +RAG
Subjt:  KQPNTGLFVGLNKGHIVRKKELAPLPTHPRGKSSKI------------------KRITELLKVGKDKRALKVAKRKLGIHKRAKKKREEMSSVLRNVRAG

Query:  AGAKKKK
         GA+KKK
Subjt:  AGAKKKK

XP_022923053.1 60S ribosomal protein L36-2-like isoform X1 [Cucurbita moschata]1.76e-3571.03Show/hide
Query:  KQPNTGLFVGLNKGHIVRKKELAPLPTHPRGKSSKI------------------KRITELLKVGKDKRALKVAKRKLGIHKRAKKKREEMSSVLRNVRAG
        KQPNTGLFVGLNKGHIV KKELAP P+  +GKSSK                   KRITELLKVGKDKRALKVAKRKLG HKRAKKKREEMSSVLR +RAG
Subjt:  KQPNTGLFVGLNKGHIVRKKELAPLPTHPRGKSSKI------------------KRITELLKVGKDKRALKVAKRKLGIHKRAKKKREEMSSVLRNVRAG

Query:  AGAKKKK
         G +KKK
Subjt:  AGAKKKK

XP_022945858.1 60S ribosomal protein L36-2-like [Cucurbita moschata]1.76e-3571.03Show/hide
Query:  KQPNTGLFVGLNKGHIVRKKELAPLPTHPRGKSSKI------------------KRITELLKVGKDKRALKVAKRKLGIHKRAKKKREEMSSVLRNVRAG
        KQPNTGLFVGLNKGHIV KKELAP P+  +GKSSK                   KRITELLKVGKDKRALKVAKRKLG HKRAKKKREEMSSVLR +RAG
Subjt:  KQPNTGLFVGLNKGHIVRKKELAPLPTHPRGKSSKI------------------KRITELLKVGKDKRALKVAKRKLGIHKRAKKKREEMSSVLRNVRAG

Query:  AGAKKKK
         G +KKK
Subjt:  AGAKKKK

TrEMBL top hitse value%identityAlignment
A0A0A0L6L0 60S ribosomal protein L361.5e-2671.96Show/hide
Query:  KQPNTGLFVGLNKGHIVRKKELAPLPTHPRGKSSK------------------IKRITELLKVGKDKRALKVAKRKLGIHKRAKKKREEMSSVLRNVRAG
        KQPNTGLFVGLNKGHIV KKELAP P+  +GKSSK                   KRITELLKVGKDKRALKVAKRKLG HKRAKKKREEMSSVLR +RAG
Subjt:  KQPNTGLFVGLNKGHIVRKKELAPLPTHPRGKSSK------------------IKRITELLKVGKDKRALKVAKRKLGIHKRAKKKREEMSSVLRNVRAG

Query:  AGAKKKK
         GA+KKK
Subjt:  AGAKKKK

A0A1S3AYD7 60S ribosomal protein L361.5e-2671.96Show/hide
Query:  KQPNTGLFVGLNKGHIVRKKELAPLPTHPRGKSSK------------------IKRITELLKVGKDKRALKVAKRKLGIHKRAKKKREEMSSVLRNVRAG
        KQPNTGLFVGLNKGHIV KKELAP P+  +GKSSK                   KRITELLKVGKDKRALKVAKRKLG HKRAKKKREEMSSVLR +RAG
Subjt:  KQPNTGLFVGLNKGHIVRKKELAPLPTHPRGKSSK------------------IKRITELLKVGKDKRALKVAKRKLGIHKRAKKKREEMSSVLRNVRAG

Query:  AGAKKKK
         GA+KKK
Subjt:  AGAKKKK

A0A5A7UN62 60S ribosomal protein L361.5e-2671.96Show/hide
Query:  KQPNTGLFVGLNKGHIVRKKELAPLPTHPRGKSSK------------------IKRITELLKVGKDKRALKVAKRKLGIHKRAKKKREEMSSVLRNVRAG
        KQPNTGLFVGLNKGHIV KKELAP P+  +GKSSK                   KRITELLKVGKDKRALKVAKRKLG HKRAKKKREEMSSVLR +RAG
Subjt:  KQPNTGLFVGLNKGHIVRKKELAPLPTHPRGKSSK------------------IKRITELLKVGKDKRALKVAKRKLGIHKRAKKKREEMSSVLRNVRAG

Query:  AGAKKKK
         GA+KKK
Subjt:  AGAKKKK

A0A6J1JC29 60S ribosomal protein L364.5e-2671.03Show/hide
Query:  KQPNTGLFVGLNKGHIVRKKELAPLPTHPRGKSSK------------------IKRITELLKVGKDKRALKVAKRKLGIHKRAKKKREEMSSVLRNVRAG
        KQPNTGLFVGLNKGHIV KKELAP P+  +GKSSK                   KRITELLKVGKDKRALKVAKRKLG HKRAKKKREEMSSVLR +RAG
Subjt:  KQPNTGLFVGLNKGHIVRKKELAPLPTHPRGKSSK------------------IKRITELLKVGKDKRALKVAKRKLGIHKRAKKKREEMSSVLRNVRAG

Query:  AGAKKKK
         G +KKK
Subjt:  AGAKKKK

E5GCU5 60S ribosomal protein L361.5e-2671.96Show/hide
Query:  KQPNTGLFVGLNKGHIVRKKELAPLPTHPRGKSSK------------------IKRITELLKVGKDKRALKVAKRKLGIHKRAKKKREEMSSVLRNVRAG
        KQPNTGLFVGLNKGHIV KKELAP P+  +GKSSK                   KRITELLKVGKDKRALKVAKRKLG HKRAKKKREEMSSVLR +RAG
Subjt:  KQPNTGLFVGLNKGHIVRKKELAPLPTHPRGKSSK------------------IKRITELLKVGKDKRALKVAKRKLGIHKRAKKKREEMSSVLRNVRAG

Query:  AGAKKKK
         GA+KKK
Subjt:  AGAKKKK

SwissProt top hitse value%identityAlignment
O80929 60S ribosomal protein L36-13.8e-2262.86Show/hide
Query:  TGLFVGLNKGHIVRKKELAPLPTHPRGKSSK------------------IKRITELLKVGKDKRALKVAKRKLGIHKRAKKKREEMSSVLRNVRA--GAG
        TGLFVGLNKGH+V ++ELAP P   +GK+SK                   KRITELLKVGKDKRALKVAKRKLG HKRAK+KREEMSSVLR +R+  GA 
Subjt:  TGLFVGLNKGHIVRKKELAPLPTHPRGKSSK------------------IKRITELLKVGKDKRALKVAKRKLGIHKRAKKKREEMSSVLRNVRA--GAG

Query:  AKKKK
        A +KK
Subjt:  AKKKK

P52866 60S ribosomal protein L369.9e-1557.95Show/hide
Query:  KQPNTGLFVGLNKGHIVRKKELAPLPTHPRGKSSK------------------IKRITELLKVGKDKRALKVAKRKLGIHKRAKKKRE
        KQPNTGLFVGLNKGHIV KKELAP P+  +GK+SK                   KRITELLKVGKDKRALKV + K+G H +  K+ E
Subjt:  KQPNTGLFVGLNKGHIVRKKELAPLPTHPRGKSSK------------------IKRITELLKVGKDKRALKVAKRKLGIHKRAKKKRE

Q9LRB8 60S ribosomal protein L364.6e-1250.54Show/hide
Query:  VGLNKGHIVRKKELAPLPTHPRG-KSSKIK-----------------RITELLKVGKDKRALKVAKRKLGIHKRAKKKREEMSSVLRNVRAGA
        VGLNKGH V KK   P P+  +G  S ++K                 R+ ELLKVGKDKRALK+ KRKLG H R KKKREEM+ VLR ++A +
Subjt:  VGLNKGHIVRKKELAPLPTHPRG-KSSKIK-----------------RITELLKVGKDKRALKVAKRKLGIHKRAKKKREEMSSVLRNVRAGA

Q9LZ57 60S ribosomal protein L36-32.2e-2263.46Show/hide
Query:  TGLFVGLNKGHIVRKKELAPLPTHPRGKSSK------------------IKRITELLKVGKDKRALKVAKRKLGIHKRAKKKREEMSSVLRNVRA-GAGA
        TGLFVGLNKGH+V K+E  P P + +GK+SK                   KRITELLKVGKDKRALKVAKRKLG HKRAK+KREEMSSVLR +R+ GAGA
Subjt:  TGLFVGLNKGHIVRKKELAPLPTHPRGKSSK------------------IKRITELLKVGKDKRALKVAKRKLGIHKRAKKKREEMSSVLRNVRA-GAGA

Query:  KKKK
         +KK
Subjt:  KKKK

Q9M352 60S ribosomal protein L36-25.8e-2361.32Show/hide
Query:  QPNTGLFVGLNKGHIVRKKELAPLPTHPRGKSSK------------------IKRITELLKVGKDKRALKVAKRKLGIHKRAKKKREEMSSVLRNVRAGA
        Q  TGLFVGLNKGH+V ++ELAP P   +GK+SK                   KRITELLKVGKDKRALKVAKRKLG HKRAK+KREEMSSVLR +R+G 
Subjt:  QPNTGLFVGLNKGHIVRKKELAPLPTHPRGKSSK------------------IKRITELLKVGKDKRALKVAKRKLGIHKRAKKKREEMSSVLRNVRAGA

Query:  GAKKKK
        G   +K
Subjt:  GAKKKK

Arabidopsis top hitse value%identityAlignment
AT2G37600.1 Ribosomal protein L36e family protein2.7e-2362.86Show/hide
Query:  TGLFVGLNKGHIVRKKELAPLPTHPRGKSSK------------------IKRITELLKVGKDKRALKVAKRKLGIHKRAKKKREEMSSVLRNVRA--GAG
        TGLFVGLNKGH+V ++ELAP P   +GK+SK                   KRITELLKVGKDKRALKVAKRKLG HKRAK+KREEMSSVLR +R+  GA 
Subjt:  TGLFVGLNKGHIVRKKELAPLPTHPRGKSSK------------------IKRITELLKVGKDKRALKVAKRKLGIHKRAKKKREEMSSVLRNVRA--GAG

Query:  AKKKK
        A +KK
Subjt:  AKKKK

AT3G53740.2 Ribosomal protein L36e family protein4.1e-2461.32Show/hide
Query:  QPNTGLFVGLNKGHIVRKKELAPLPTHPRGKSSK------------------IKRITELLKVGKDKRALKVAKRKLGIHKRAKKKREEMSSVLRNVRAGA
        Q  TGLFVGLNKGH+V ++ELAP P   +GK+SK                   KRITELLKVGKDKRALKVAKRKLG HKRAK+KREEMSSVLR +R+G 
Subjt:  QPNTGLFVGLNKGHIVRKKELAPLPTHPRGKSSK------------------IKRITELLKVGKDKRALKVAKRKLGIHKRAKKKREEMSSVLRNVRAGA

Query:  GAKKKK
        G   +K
Subjt:  GAKKKK

AT3G53740.3 Ribosomal protein L36e family protein4.1e-2461.32Show/hide
Query:  QPNTGLFVGLNKGHIVRKKELAPLPTHPRGKSSK------------------IKRITELLKVGKDKRALKVAKRKLGIHKRAKKKREEMSSVLRNVRAGA
        Q  TGLFVGLNKGH+V ++ELAP P   +GK+SK                   KRITELLKVGKDKRALKVAKRKLG HKRAK+KREEMSSVLR +R+G 
Subjt:  QPNTGLFVGLNKGHIVRKKELAPLPTHPRGKSSK------------------IKRITELLKVGKDKRALKVAKRKLGIHKRAKKKREEMSSVLRNVRAGA

Query:  GAKKKK
        G   +K
Subjt:  GAKKKK

AT3G53740.4 Ribosomal protein L36e family protein4.1e-2461.32Show/hide
Query:  QPNTGLFVGLNKGHIVRKKELAPLPTHPRGKSSK------------------IKRITELLKVGKDKRALKVAKRKLGIHKRAKKKREEMSSVLRNVRAGA
        Q  TGLFVGLNKGH+V ++ELAP P   +GK+SK                   KRITELLKVGKDKRALKVAKRKLG HKRAK+KREEMSSVLR +R+G 
Subjt:  QPNTGLFVGLNKGHIVRKKELAPLPTHPRGKSSK------------------IKRITELLKVGKDKRALKVAKRKLGIHKRAKKKREEMSSVLRNVRAGA

Query:  GAKKKK
        G   +K
Subjt:  GAKKKK

AT5G02450.1 Ribosomal protein L36e family protein1.6e-2363.46Show/hide
Query:  TGLFVGLNKGHIVRKKELAPLPTHPRGKSSK------------------IKRITELLKVGKDKRALKVAKRKLGIHKRAKKKREEMSSVLRNVRA-GAGA
        TGLFVGLNKGH+V K+E  P P + +GK+SK                   KRITELLKVGKDKRALKVAKRKLG HKRAK+KREEMSSVLR +R+ GAGA
Subjt:  TGLFVGLNKGHIVRKKELAPLPTHPRGKSSK------------------IKRITELLKVGKDKRALKVAKRKLGIHKRAKKKREEMSSVLRNVRA-GAGA

Query:  KKKK
         +KK
Subjt:  KKKK


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGTTTTCCTCGCCTTCAATCACTTGGTTAAGCTCCAGACAAGAAGGCAATGGCTCGAAGCAGCCGAATACTGGTCTCTTTGTGGGACTTAACAAAGGACACATAGTTAG
AAAGAAAGAGTTGGCTCCCCTCCCCACACATCCTAGAGGAAAAAGTAGCAAAATAAAGAGAATAACTGAGCTTCTTAAAGTTGGAAAGGACAAAAGAGCACTTAAAGTGG
CCAAGAGAAAGTTGGGAATTCACAAGAGAGCCAAGAAGAAGAGAGAAGAAATGTCCAGCGTACTCCGCAACGTGAGAGCTGGTGCAGGCGCGAAAAAGAAGAAATGA
mRNA sequenceShow/hide mRNA sequence
ATGTTTTCCTCGCCTTCAATCACTTGGTTAAGCTCCAGACAAGAAGGCAATGGCTCGAAGCAGCCGAATACTGGTCTCTTTGTGGGACTTAACAAAGGACACATAGTTAG
AAAGAAAGAGTTGGCTCCCCTCCCCACACATCCTAGAGGAAAAAGTAGCAAAATAAAGAGAATAACTGAGCTTCTTAAAGTTGGAAAGGACAAAAGAGCACTTAAAGTGG
CCAAGAGAAAGTTGGGAATTCACAAGAGAGCCAAGAAGAAGAGAGAAGAAATGTCCAGCGTACTCCGCAACGTGAGAGCTGGTGCAGGCGCGAAAAAGAAGAAATGA
Protein sequenceShow/hide protein sequence
MFSSPSITWLSSRQEGNGSKQPNTGLFVGLNKGHIVRKKELAPLPTHPRGKSSKIKRITELLKVGKDKRALKVAKRKLGIHKRAKKKREEMSSVLRNVRAGAGAKKKK