CuGenDBv2

Gene ID	IVF0018807
Organism	Cucumis melo ssp. agrestis cv. IVF77 (Melon (IVF77) v1)
Description	ATP synthase subunit alpha, chloroplastic
Genome location	chr07:23901200..23901376
RNA-Seq Expression	IVF0018807
Synteny	IVF0018807
Gene Ontology terms	GO:0009635 - response to herbicide (biological process) GO:0009772 - photosynthetic electron transport in photosystem II (biological process) GO:0015986 - ATP synthesis coupled proton transport (biological process) GO:0018298 - protein-chromophore linkage (biological process) GO:0005743 - mitochondrial inner membrane (cellular component) GO:0009523 - photosystem II (cellular component) GO:0009535 - chloroplast thylakoid membrane (cellular component) GO:0016021 - integral component of membrane (cellular component) GO:0045261 - proton-transporting ATP synthase complex, catalytic core F(1) (cellular component) GO:0005524 - ATP binding (molecular function) GO:0016168 - chlorophyll binding (molecular function) GO:0045156 - electron transporter, transferring electrons within the cyclic electron transport pathway of photosynthesis activity (molecular function) GO:0046872 - metal ion binding (molecular function) GO:0046933 - proton-transporting ATP synthase activity, rotational mechanism (molecular function) GO:0046961 - proton-transporting ATPase activity, rotational mechanism (molecular function)
InterPro domains	IPR027417 - P-loop containing nucleoside triphosphate hydrolase

Homology

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GenBank top hits

e value

%identity

Alignment

AAN86913.1 ATPase alpha subunit, partial [Arabidopsis thaliana]

8.02e-17

88.64

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Query:  DSRLIESPAPGIILRRFVYEHLQTGLIAIDSMIPIGRGHRELII
        +SRLIESPAPGII RR VYE LQTGLIAIDSMIPIGRG RELII
Subjt:  DSRLIESPAPGIILRRFVYEHLQTGLIAIDSMIPIGRGHRELII

GFP81799.1 ATP synthase subunit alpha chloroplastic [Phtheirospermum japonicum]

5.14e-17

88.64

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Query:  DSRLIESPAPGIILRRFVYEHLQTGLIAIDSMIPIGRGHRELII
        +SRLIESPAPGII RR VYE LQTGLIAIDSMIPIGRG RELII
Subjt:  DSRLIESPAPGIILRRFVYEHLQTGLIAIDSMIPIGRGHRELII

GFQ08748.1 ATP synthase subunit alpha chloroplastic [Phtheirospermum japonicum]

2.72e-17

88.64

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Query:  DSRLIESPAPGIILRRFVYEHLQTGLIAIDSMIPIGRGHRELII
        +SRLIESPAPGII RR VYE LQTGLIAIDSMIPIGRG RELII
Subjt:  DSRLIESPAPGIILRRFVYEHLQTGLIAIDSMIPIGRGHRELII

KAF4381564.1 hypothetical protein F8388_021192 [Cannabis sativa]

3.66e-17

93.18

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Query:  DSRLIESPAPGIILRRFVYEHLQTGLIAIDSMIPIGRGHRELII
        +SRLIESPAPGII RRFVYE LQTGLIAIDSMIPIGRGHRELII
Subjt:  DSRLIESPAPGIILRRFVYEHLQTGLIAIDSMIPIGRGHRELII

MBN8156921.1 F0F1 ATP synthase subunit alpha [Vibrio vulnificus]

5.14e-17

88.64

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Query:  DSRLIESPAPGIILRRFVYEHLQTGLIAIDSMIPIGRGHRELII
        +SRLIESPAPGII RR VYE LQTGLIAIDSMIPIGRG RELII
Subjt:  DSRLIESPAPGIILRRFVYEHLQTGLIAIDSMIPIGRGHRELII

TrEMBL top hits

e value

%identity

Alignment

A0A1I9VXB2 ATP synthase subunit alpha, chloroplastic

6.8e-13

89.36

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Query:  SLLDSRLIESPAPGIILRRFVYEHLQTGLIAIDSMIPIGRGHRELII
        S L+SRLIESPAPGIILRR VYE LQTGLIAIDSMIPIGRG RELII
Subjt:  SLLDSRLIESPAPGIILRRFVYEHLQTGLIAIDSMIPIGRGHRELII

A0A1X9Q1B0 ATP synthase subunit alpha, chloroplastic

1.2e-12

93.18

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Query:  DSRLIESPAPGIILRRFVYEHLQTGLIAIDSMIPIGRGHRELII
        DSRLIESPAPGIILRR VYE LQTGLIAIDSMIPIGRG RELII
Subjt:  DSRLIESPAPGIILRRFVYEHLQTGLIAIDSMIPIGRGHRELII

A0A218KG35 ATP synthase subunit alpha, chloroplastic

1.2e-12

93.18

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Query:  DSRLIESPAPGIILRRFVYEHLQTGLIAIDSMIPIGRGHRELII
        DSRLIESPAPGIILRR VYE LQTGLIAIDSMIPIGRG RELII
Subjt:  DSRLIESPAPGIILRRFVYEHLQTGLIAIDSMIPIGRGHRELII

A0A650BJC5 ATP synthase subunit alpha, chloroplastic

6.8e-13

89.36

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Query:  SLLDSRLIESPAPGIILRRFVYEHLQTGLIAIDSMIPIGRGHRELII
        S L+SRLIESPAPGIILRR VYE LQTGLIAIDSMIPIGRG RELII
Subjt:  SLLDSRLIESPAPGIILRRFVYEHLQTGLIAIDSMIPIGRGHRELII

A0A7J6HYW8 Photosystem II protein D1

2.3e-13

89.36

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Query:  SLLDSRLIESPAPGIILRRFVYEHLQTGLIAIDSMIPIGRGHRELII
        S  +SRLIESPAPGII RRFVYE LQTGLIAIDSMIPIGRGHRELII
Subjt:  SLLDSRLIESPAPGIILRRFVYEHLQTGLIAIDSMIPIGRGHRELII

SwissProt top hits

e value

%identity

Alignment

A4QJA0 ATP synthase subunit alpha, chloroplastic

4.5e-14

85.11

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Query:  SLLDSRLIESPAPGIILRRFVYEHLQTGLIAIDSMIPIGRGHRELII
        S  +SRLIESPAPGII RR VYE LQTGLIAIDSMIPIGRG RELII
Subjt:  SLLDSRLIESPAPGIILRRFVYEHLQTGLIAIDSMIPIGRGHRELII

A4QJI4 ATP synthase subunit alpha, chloroplastic

4.5e-14

85.11

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Query:  SLLDSRLIESPAPGIILRRFVYEHLQTGLIAIDSMIPIGRGHRELII
        S  +SRLIESPAPGII RR VYE LQTGLIAIDSMIPIGRG RELII
Subjt:  SLLDSRLIESPAPGIILRRFVYEHLQTGLIAIDSMIPIGRGHRELII

A6MMA7 ATP synthase subunit alpha, chloroplastic

3.4e-14

85.11

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Query:  SLLDSRLIESPAPGIILRRFVYEHLQTGLIAIDSMIPIGRGHRELII
        S  +SRLIESPAPGII RR VYE LQTGLIAIDSMIPIGRG RELII
Subjt:  SLLDSRLIESPAPGIILRRFVYEHLQTGLIAIDSMIPIGRGHRELII

Q2QDA3 ATP synthase subunit alpha, chloroplastic

3.1e-15

93.18

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Query:  DSRLIESPAPGIILRRFVYEHLQTGLIAIDSMIPIGRGHRELII
        DSRLIESPAPGIILRR VYE LQTGLIAIDSMIPIGRG RELII
Subjt:  DSRLIESPAPGIILRRFVYEHLQTGLIAIDSMIPIGRGHRELII

Q70XV0 ATP synthase subunit alpha, chloroplastic

4.5e-14

88.64

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Query:  DSRLIESPAPGIILRRFVYEHLQTGLIAIDSMIPIGRGHRELII
        +SRLIESPAPGII RR VYE LQTGLIAIDSMIPIGRG RELII
Subjt:  DSRLIESPAPGIILRRFVYEHLQTGLIAIDSMIPIGRGHRELII

Arabidopsis top hits

e value

%identity

Alignment

AT2G07698.1 ATPase, F1 complex, alpha subunit protein

3.4e-09

56.82

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Query:  DSRLIESPAPGIILRRFVYEHLQTGLIAIDSMIPIGRGHRELII
        + R +E  APGI+ R+ V+E +QTGL A+DS++PIGRG REL+I
Subjt:  DSRLIESPAPGIILRRFVYEHLQTGLIAIDSMIPIGRGHRELII

ATCG00120.1 ATP synthase subunit alpha

3.2e-15

85.11

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Query:  SLLDSRLIESPAPGIILRRFVYEHLQTGLIAIDSMIPIGRGHRELII
        S  +SRLIESPAPGII RR VYE LQTGLIAIDSMIPIGRG RELII
Subjt:  SLLDSRLIESPAPGIILRRFVYEHLQTGLIAIDSMIPIGRGHRELII

ATMG01190.1 ATP synthase subunit 1

3.4e-09

56.82

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Query:  DSRLIESPAPGIILRRFVYEHLQTGLIAIDSMIPIGRGHRELII
        + R +E  APGI+ R+ V+E +QTGL A+DS++PIGRG REL+I
Subjt:  DSRLIESPAPGIILRRFVYEHLQTGLIAIDSMIPIGRGHRELII

Sequences

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CDS sequence

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ATGGAATCTCTGATTTTGAGATCATTGTTAGACTCTCGTTTAATTGAATCCCCCGCTCCTGGTATTATTTTGAGACGTTTCGTATACGAGCATCTTCAAACAGGACTTAT
TGCTATTGATTCAATGATTCCTATCGGACGTGGTCATCGAGAATTAATTATACCCTGTTTTGACTGA

mRNA sequence

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ATGGAATCTCTGATTTTGAGATCATTGTTAGACTCTCGTTTAATTGAATCCCCCGCTCCTGGTATTATTTTGAGACGTTTCGTATACGAGCATCTTCAAACAGGACTTAT
TGCTATTGATTCAATGATTCCTATCGGACGTGGTCATCGAGAATTAATTATACCCTGTTTTGACTGA

Protein sequence

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MESLILRSLLDSRLIESPAPGIILRRFVYEHLQTGLIAIDSMIPIGRGHRELIIPCFD

IVF0018807 (gene) of Melon (IVF77) v1 genome