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IVF0018814 (gene) of Melon (IVF77) v1 genome

Gene IDIVF0018814
OrganismCucumis melo ssp. agrestis cv. IVF77 (Melon (IVF77) v1)
DescriptionDNA/RNA polymerases superfamily protein
Genome locationchr12:7193819..7194352
RNA-Seq ExpressionIVF0018814
SyntenyIVF0018814
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0031952.1 Retrotransposable element Tf2 [Cucumis melo var. makuwa]1.09e-1858.25Show/hide
Query:  ACSFKARKKHSQGQQSFKSLFTD------STSKIREEQYGNANLDEAGSLDAQETQDSGVESILSVSSEELKETKAGEEAEDNEILENIISDVRELFVEE
        +CSFKA++KH QG QS KS FT+      S++ ++   Y N  L+E GSL   E QD  VES+ SVSSEEL+E KAGEE ED+EILENIISDVR LFVEE
Subjt:  ACSFKARKKHSQGQQSFKSLFTD------STSKIREEQYGNANLDEAGSLDAQETQDSGVESILSVSSEELKETKAGEEAEDNEILENIISDVRELFVEE

Query:  GIE
         ++
Subjt:  GIE

KAA0041893.1 putative mitochondrial protein [Cucumis melo var. makuwa]6.42e-0462.22Show/hide
Query:  EQYGNANLDEAGSLDAQETQDSGVESILSVSSEELKETKAGEEAE
        EQYGN   +EAGS + Q TQDS VE ++S+SSEEL+E + GEEAE
Subjt:  EQYGNANLDEAGSLDAQETQDSGVESILSVSSEELKETKAGEEAE

TYK16775.1 DNA/RNA polymerases superfamily protein [Cucumis melo var. makuwa]1.18e-1858.25Show/hide
Query:  ACSFKARKKHSQGQQSFKSLFTD------STSKIREEQYGNANLDEAGSLDAQETQDSGVESILSVSSEELKETKAGEEAEDNEILENIISDVRELFVEE
        +CSFKA++KH QG QS KS FT+      S++ ++   Y N  L+E GSL   E QD  VES+ SVSSEEL+E KAGEE ED+EILENIISDVR LFVEE
Subjt:  ACSFKARKKHSQGQQSFKSLFTD------STSKIREEQYGNANLDEAGSLDAQETQDSGVESILSVSSEELKETKAGEEAEDNEILENIISDVRELFVEE

Query:  GIE
         ++
Subjt:  GIE

TYK30617.1 putative vacuolar protein sorting-associated protein 13A isoform X1 [Cucumis melo var. makuwa]2.68e-2546.5Show/hide
Query:  FGACSFKARKKHSQGQQSFKSLFTDSTSKIRE----------------------------------------------------EQYGNANLDEAGSLDA
        FGACSFKA++KH Q QQSF+ LF +    + E                                                    EQYGNANL+EAGSL+A
Subjt:  FGACSFKARKKHSQGQQSFKSLFTDSTSKIRE----------------------------------------------------EQYGNANLDEAGSLDA

Query:  QETQDSGVESILSVSSEELKETKAGEEAEDNEILENIISDVRELFVEEGIEEKQPSL
         ETQDS VES++ VSSEEL+E + GEEAED+EILENII+D  ELFVEEG+EE+QP L
Subjt:  QETQDSGVESILSVSSEELKETKAGEEAEDNEILENIISDVRELFVEEGIEEKQPSL

TrEMBL top hitse value%identityAlignment
A0A5A7SLN9 Retrotransposable element Tf28.1e-1658.25Show/hide
Query:  ACSFKARKKHSQGQQSFKSLFTD------STSKIREEQYGNANLDEAGSLDAQETQDSGVESILSVSSEELKETKAGEEAEDNEILENIISDVRELFVEE
        +CSFKA++KH QG QS KS FT+      S++ ++   Y N  L+E GSL   E QD  VES+ SVSSEEL+E KAGEE ED+EILENIISDVR LFVEE
Subjt:  ACSFKARKKHSQGQQSFKSLFTD------STSKIREEQYGNANLDEAGSLDAQETQDSGVESILSVSSEELKETKAGEEAEDNEILENIISDVRELFVEE

Query:  GIE
         ++
Subjt:  GIE

A0A5D3CZ35 DNA/RNA polymerases superfamily protein8.1e-1658.25Show/hide
Query:  ACSFKARKKHSQGQQSFKSLFTD------STSKIREEQYGNANLDEAGSLDAQETQDSGVESILSVSSEELKETKAGEEAEDNEILENIISDVRELFVEE
        +CSFKA++KH QG QS KS FT+      S++ ++   Y N  L+E GSL   E QD  VES+ SVSSEEL+E KAGEE ED+EILENIISDVR LFVEE
Subjt:  ACSFKARKKHSQGQQSFKSLFTD------STSKIREEQYGNANLDEAGSLDAQETQDSGVESILSVSSEELKETKAGEEAEDNEILENIISDVRELFVEE

Query:  GIE
         ++
Subjt:  GIE

A0A5D3E3H0 Putative vacuolar protein sorting-associated protein 13A isoform X19.9e-2247.13Show/hide
Query:  FGACSFKARKKHSQGQQSFKSLF-------------------------------------------------TDSTSKIR---EEQYGNANLDEAGSLDA
        FGACSFKA++KH Q QQSF+ LF                                                  +S +++R   +EQYGNANL+EAGSL+A
Subjt:  FGACSFKARKKHSQGQQSFKSLF-------------------------------------------------TDSTSKIR---EEQYGNANLDEAGSLDA

Query:  QETQDSGVESILSVSSEELKETKAGEEAEDNEILENIISDVRELFVEEGIEEKQPSL
         ETQDS VES++ VSSEEL+E + GEEAED+EILENII+D  ELFVEEG+EE+QP L
Subjt:  QETQDSGVESILSVSSEELKETKAGEEAEDNEILENIISDVRELFVEEGIEEKQPSL

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGAAAAGACATTCTTCAACAATGTTTGGACTGACCTTTTCGATTCTGAGTCTTTTGGAGCTTGTTCATTCAAGGCTCGAAAGAAGCATTCCCAGGGTCAACAATCATT
CAAGTCTTTGTTCACTGATAGTACGAGCAAAATACGCGAGGAGCAATACGGGAATGCTAATCTAGATGAGGCTGGCAGTCTCGATGCTCAAGAAACTCAAGACTCAGGTG
TTGAATCAATTCTAAGTGTAAGTAGTGAGGAATTAAAAGAGACTAAAGCAGGGGAAGAGGCTGAAGATAATGAGATTTTGGAGAACATAATTAGTGATGTCCGTGAGTTG
TTTGTGGAGGAAGGTATAGAAGAAAAACAACCTTCTCTCTAG
mRNA sequenceShow/hide mRNA sequence
ATGGAAAAGACATTCTTCAACAATGTTTGGACTGACCTTTTCGATTCTGAGTCTTTTGGAGCTTGTTCATTCAAGGCTCGAAAGAAGCATTCCCAGGGTCAACAATCATT
CAAGTCTTTGTTCACTGATAGTACGAGCAAAATACGCGAGGAGCAATACGGGAATGCTAATCTAGATGAGGCTGGCAGTCTCGATGCTCAAGAAACTCAAGACTCAGGTG
TTGAATCAATTCTAAGTGTAAGTAGTGAGGAATTAAAAGAGACTAAAGCAGGGGAAGAGGCTGAAGATAATGAGATTTTGGAGAACATAATTAGTGATGTCCGTGAGTTG
TTTGTGGAGGAAGGTATAGAAGAAAAACAACCTTCTCTCTAG
Protein sequenceShow/hide protein sequence
MEKTFFNNVWTDLFDSESFGACSFKARKKHSQGQQSFKSLFTDSTSKIREEQYGNANLDEAGSLDAQETQDSGVESILSVSSEELKETKAGEEAEDNEILENIISDVREL
FVEEGIEEKQPSL