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IVF0018847 (gene) of Melon (IVF77) v1 genome

Gene IDIVF0018847
OrganismCucumis melo ssp. agrestis cv. IVF77 (Melon (IVF77) v1)
DescriptionRetrovirus-related pol polyprotein from transposon tnt 1-94
Genome locationchr11:8440150..8440815
RNA-Seq ExpressionIVF0018847
SyntenyIVF0018847
Gene Ontology termsGO:0006412 - translation (biological process)
GO:0015074 - DNA integration (biological process)
GO:0022627 - cytosolic small ribosomal subunit (cellular component)
GO:0003723 - RNA binding (molecular function)
GO:0003735 - structural constituent of ribosome (molecular function)
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0031317.1 uncharacterized protein E6C27_scaffold139G00700 [Cucumis melo var. makuwa]2.73e-6199.12Show/hide
Query:  MIDADVDKEKEIEDNEETEEDDNHRENKSKMVHDTSNKVKVVQEKAKVKIMEIATNIEKARPKRQPKPSKKVLENVKEQKNVRGKKNDSPKPTRHSPRIR
        MIDADVDKEKEIEDNEETEEDDNHRENKSKMVHDTSNKVKVVQEKAKVKIMEIATNIEKARPKRQPKPSKKVLENVKEQKNVRGKKNDSPKPTR+SPRIR
Subjt:  MIDADVDKEKEIEDNEETEEDDNHRENKSKMVHDTSNKVKVVQEKAKVKIMEIATNIEKARPKRQPKPSKKVLENVKEQKNVRGKKNDSPKPTRHSPRIR

Query:  DLAPSFDLQISQL
        DLAPSFDLQISQL
Subjt:  DLAPSFDLQISQL
KAA0039507.1 hypothetical protein E6C27_scaffold64G003290 [Cucumis melo var. makuwa]4.96e-6096.4Show/hide
Query:  MIDADVDKEKEIEDNEETEEDDNHRENKSKMVHDTSNKVKVVQEKAKVKIMEIATNIEKARPKRQPKPSKKVLENVKEQKNVRGKKNDSPKPTRHSPRIR
        MIDADVDKEKEIEDNEETEEDDNHRENKSKMVHDTSNKVKVVQEKAKVKIMEIATNIEK RPKRQ KPSKKVLENVKEQKN+RGKKNDSPKPTRHSPRI+
Subjt:  MIDADVDKEKEIEDNEETEEDDNHRENKSKMVHDTSNKVKVVQEKAKVKIMEIATNIEKARPKRQPKPSKKVLENVKEQKNVRGKKNDSPKPTRHSPRIR

Query:  DLAPSFDLQIS
        DLAPSFDLQIS
Subjt:  DLAPSFDLQIS
KAA0065297.1 hypothetical protein E6C27_scaffold1023G00110 [Cucumis melo var. makuwa]2.40e-6399.12Show/hide
Query:  MIDADVDKEKEIEDNEETEEDDNHRENKSKMVHDTSNKVKVVQEKAKVKIMEIATNIEKARPKRQPKPSKKVLENVKEQKNVRGKKNDSPKPTRHSPRIR
        MIDADVDKEKEIEDNEETEEDDNHRENKSKMVHDTSNKVKVVQEKAKVKIMEIATNIEKARPKRQPKPSKKVLENVKEQKNVRGKKNDSPKPT+HSPRIR
Subjt:  MIDADVDKEKEIEDNEETEEDDNHRENKSKMVHDTSNKVKVVQEKAKVKIMEIATNIEKARPKRQPKPSKKVLENVKEQKNVRGKKNDSPKPTRHSPRIR

Query:  DLAPSFDLQISQL
        DLAPSFDLQISQL
Subjt:  DLAPSFDLQISQL
TYK15261.1 hypothetical protein E5676_scaffold892G00380 [Cucumis melo var. makuwa]6.84e-6399.12Show/hide
Query:  MIDADVDKEKEIEDNEETEEDDNHRENKSKMVHDTSNKVKVVQEKAKVKIMEIATNIEKARPKRQPKPSKKVLENVKEQKNVRGKKNDSPKPTRHSPRIR
        MIDADVDKEKEIEDNEETEEDDNHRENKSKMVHDTSNKVKVVQEKAKVKIMEIATNIEKARPKRQPKPSKKVLENVKEQKNVRGKKNDSPKPTR+SPRIR
Subjt:  MIDADVDKEKEIEDNEETEEDDNHRENKSKMVHDTSNKVKVVQEKAKVKIMEIATNIEKARPKRQPKPSKKVLENVKEQKNVRGKKNDSPKPTRHSPRIR

Query:  DLAPSFDLQISQL
        DLAPSFDLQISQL
Subjt:  DLAPSFDLQISQL
TYK22453.1 uncharacterized protein E5676_scaffold3009G00010 [Cucumis melo var. makuwa]2.73e-6199.12Show/hide
Query:  MIDADVDKEKEIEDNEETEEDDNHRENKSKMVHDTSNKVKVVQEKAKVKIMEIATNIEKARPKRQPKPSKKVLENVKEQKNVRGKKNDSPKPTRHSPRIR
        MIDADVDKEKEIEDNEETEEDDNHRENKSKMVHDTSNKVKVVQEKAKVKIMEIATNIEKARPKRQPKPSKKVLENVKEQKNVRGKKNDSPKPTR+SPRIR
Subjt:  MIDADVDKEKEIEDNEETEEDDNHRENKSKMVHDTSNKVKVVQEKAKVKIMEIATNIEKARPKRQPKPSKKVLENVKEQKNVRGKKNDSPKPTRHSPRIR

Query:  DLAPSFDLQISQL
        DLAPSFDLQISQL
Subjt:  DLAPSFDLQISQL
TrEMBL top hitse value%identityAlignment
A0A5A7TDE0 Uncharacterized protein1.8e-4696.4Show/hide
Query:  MIDADVDKEKEIEDNEETEEDDNHRENKSKMVHDTSNKVKVVQEKAKVKIMEIATNIEKARPKRQPKPSKKVLENVKEQKNVRGKKNDSPKPTRHSPRIR
        MIDADVDKEKEIEDNEETEEDDNHRENKSKMVHDTSNKVKVVQEKAKVKIMEIATNIEK RPKRQ KPSKKVLENVKEQKN+RGKKNDSPKPTRHSPRI+
Subjt:  MIDADVDKEKEIEDNEETEEDDNHRENKSKMVHDTSNKVKVVQEKAKVKIMEIATNIEKARPKRQPKPSKKVLENVKEQKNVRGKKNDSPKPTRHSPRIR

Query:  DLAPSFDLQIS
        DLAPSFDLQIS
Subjt:  DLAPSFDLQIS
A0A5A7VDY1 Uncharacterized protein5.1e-4999.12Show/hide
Query:  MIDADVDKEKEIEDNEETEEDDNHRENKSKMVHDTSNKVKVVQEKAKVKIMEIATNIEKARPKRQPKPSKKVLENVKEQKNVRGKKNDSPKPTRHSPRIR
        MIDADVDKEKEIEDNEETEEDDNHRENKSKMVHDTSNKVKVVQEKAKVKIMEIATNIEKARPKRQPKPSKKVLENVKEQKNVRGKKNDSPKPT+HSPRIR
Subjt:  MIDADVDKEKEIEDNEETEEDDNHRENKSKMVHDTSNKVKVVQEKAKVKIMEIATNIEKARPKRQPKPSKKVLENVKEQKNVRGKKNDSPKPTRHSPRIR

Query:  DLAPSFDLQISQL
        DLAPSFDLQISQL
Subjt:  DLAPSFDLQISQL
A0A5A7VIA9 Uncharacterized protein1.1e-4899.12Show/hide
Query:  MIDADVDKEKEIEDNEETEEDDNHRENKSKMVHDTSNKVKVVQEKAKVKIMEIATNIEKARPKRQPKPSKKVLENVKEQKNVRGKKNDSPKPTRHSPRIR
        MIDADVDKEKEIEDNEETEEDDNHRENKSKMVHDTSNKVKVVQEKAKVKIMEIATNIEKARPKRQPKPSKKVLENVKEQKNVRGKKNDSPKPTR+SPRIR
Subjt:  MIDADVDKEKEIEDNEETEEDDNHRENKSKMVHDTSNKVKVVQEKAKVKIMEIATNIEKARPKRQPKPSKKVLENVKEQKNVRGKKNDSPKPTRHSPRIR

Query:  DLAPSFDLQISQL
        DLAPSFDLQISQL
Subjt:  DLAPSFDLQISQL
A0A5D3CTS8 Uncharacterized protein1.1e-4899.12Show/hide
Query:  MIDADVDKEKEIEDNEETEEDDNHRENKSKMVHDTSNKVKVVQEKAKVKIMEIATNIEKARPKRQPKPSKKVLENVKEQKNVRGKKNDSPKPTRHSPRIR
        MIDADVDKEKEIEDNEETEEDDNHRENKSKMVHDTSNKVKVVQEKAKVKIMEIATNIEKARPKRQPKPSKKVLENVKEQKNVRGKKNDSPKPTR+SPRIR
Subjt:  MIDADVDKEKEIEDNEETEEDDNHRENKSKMVHDTSNKVKVVQEKAKVKIMEIATNIEKARPKRQPKPSKKVLENVKEQKNVRGKKNDSPKPTRHSPRIR

Query:  DLAPSFDLQISQL
        DLAPSFDLQISQL
Subjt:  DLAPSFDLQISQL
A0A5D3DFX6 Uncharacterized protein1.1e-4899.12Show/hide
Query:  MIDADVDKEKEIEDNEETEEDDNHRENKSKMVHDTSNKVKVVQEKAKVKIMEIATNIEKARPKRQPKPSKKVLENVKEQKNVRGKKNDSPKPTRHSPRIR
        MIDADVDKEKEIEDNEETEEDDNHRENKSKMVHDTSNKVKVVQEKAKVKIMEIATNIEKARPKRQPKPSKKVLENVKEQKNVRGKKNDSPKPTR+SPRIR
Subjt:  MIDADVDKEKEIEDNEETEEDDNHRENKSKMVHDTSNKVKVVQEKAKVKIMEIATNIEKARPKRQPKPSKKVLENVKEQKNVRGKKNDSPKPTRHSPRIR

Query:  DLAPSFDLQISQL
        DLAPSFDLQISQL
Subjt:  DLAPSFDLQISQL
SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGATTGATGCTGATGTTGATAAAGAGAAAGAGATTGAAGATAATGAGGAAACCGAGGAAGATGATAATCATCGTGAAAATAAGTCAAAAATGGTGCATGACACATCAAA
CAAAGTGAAGGTTGTTCAAGAAAAGGCAAAAGTGAAAATTATGGAAATAGCGACGAATATTGAAAAAGCTAGGCCGAAGAGACAACCTAAACCATCAAAGAAAGTGTTGG
AGAATGTGAAAGAACAAAAGAATGTAAGAGGCAAGAAGAATGATTCTCCAAAACCAACAAGACATTCTCCTAGAATAAGGGATCTAGCACCTAGTTTTGATTTGCAAATC
TCTCAATTATAA
mRNA sequenceShow/hide mRNA sequence
ATGATTGATGCTGATGTTGATAAAGAGAAAGAGATTGAAGATAATGAGGAAACCGAGGAAGATGATAATCATCGTGAAAATAAGTCAAAAATGGTGCATGACACATCAAA
CAAAGTGAAGGTTGTTCAAGAAAAGGCAAAAGTGAAAATTATGGAAATAGCGACGAATATTGAAAAAGCTAGGCCGAAGAGACAACCTAAACCATCAAAGAAAGTGTTGG
AGAATGTGAAAGAACAAAAGAATGTAAGAGGCAAGAAGAATGATTCTCCAAAACCAACAAGACATTCTCCTAGAATAAGGGATCTAGCACCTAGTTTTGATTTGCAAATC
TCTCAATTATAA
Protein sequenceShow/hide protein sequence
MIDADVDKEKEIEDNEETEEDDNHRENKSKMVHDTSNKVKVVQEKAKVKIMEIATNIEKARPKRQPKPSKKVLENVKEQKNVRGKKNDSPKPTRHSPRIRDLAPSFDLQI
SQL