; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

IVF0018950 (gene) of Melon (IVF77) v1 genome

Gene IDIVF0018950
OrganismCucumis melo ssp. agrestis cv. IVF77 (Melon (IVF77) v1)
DescriptionGlial fibrillary acidic protein-like
Genome locationchr03:15150562..15151998
RNA-Seq ExpressionIVF0018950
SyntenyIVF0018950
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0025321.1 glial fibrillary acidic protein-like [Cucumis melo var. makuwa]2.39e-6957.48Show/hide
Query:  MNCVLATENEKLREEVKKWVQQAVNTQRDLDEAKRKRLELEKENDSLNTEAIQVRKKNKRLLRNIANLHEEIEAKK------------------------
        MNCVLATENEKLREEVKKWVQQAVN QRDLDEAKRKRLELEKENDSLNTEAIQVRKKNKRLLRNIANLHEEIEA+K                        
Subjt:  MNCVLATENEKLREEVKKWVQQAVNTQRDLDEAKRKRLELEKENDSLNTEAIQVRKKNKRLLRNIANLHEEIEAKK------------------------

Query:  ---------------------------------------------------------------------------------DEYETLRRKYDDAIRRMER
                                                                                         DEYETLRRKYDDAIRRMER
Subjt:  ---------------------------------------------------------------------------------DEYETLRRKYDDAIRRMER

Query:  GAEKLRQMASVADQFSVQARTLRQGVIPTRDTDEELSHFLGIIGQCLGRFGCYH
        GAEKLRQMASVADQFSVQARTLRQGVIPTRD DEELSHFLGIIGQCLGRFGCYH
Subjt:  GAEKLRQMASVADQFSVQARTLRQGVIPTRDTDEELSHFLGIIGQCLGRFGCYH

KAA0032013.1 glial fibrillary acidic protein-like [Cucumis melo var. makuwa]5.41e-9261Show/hide
Query:  MAETFRSLNHCRIQGKGKFFSCAPMLFIWISSHLRYPNNFGYPQIKFSSPWNKTRNTIREFNSAHWDPKDPEFGVWMQFFSHLTTIEAIWRAPWMPTSPL
        M ETFRSLNHCRIQ                                   P+N  R  +     AH     P                 +W+  + PT   
Subjt:  MAETFRSLNHCRIQGKGKFFSCAPMLFIWISSHLRYPNNFGYPQIKFSSPWNKTRNTIREFNSAHWDPKDPEFGVWMQFFSHLTTIEAIWRAPWMPTSPL

Query:  TYRCGKLAFIPLLGLWGGIAYSPLLVLRQSWSKQFAPVVCGLEDWEFSYESNIANDKIHEAVEAWKFVKKMKSLRHCE----------------------
                 I L+G  GGIAYSPLLVLRQSWSKQFAPVVCGLEDWEFSYESNIAN+KIHEAVEAWKFVKKMKSLRHCE                      
Subjt:  TYRCGKLAFIPLLGLWGGIAYSPLLVLRQSWSKQFAPVVCGLEDWEFSYESNIANDKIHEAVEAWKFVKKMKSLRHCE----------------------

Query:  ESLVPNIELKKYHDQEKELKRLREMNCVLATENEKLREEVKKWVQQAVNTQRDLDEAKRKRLELEKENDSLNTEAIQVRKKNKRLLRNIANLHEEIEAKK
        ESLVPNIELKKYHD+EKELKRLREMNCV+ATENEKLREEVKKWVQQAVNTQRDLDEAKRK LELEKENDSLNTEAIQVRKKNKRLLRNIANLHEEIEAKK
Subjt:  ESLVPNIELKKYHDQEKELKRLREMNCVLATENEKLREEVKKWVQQAVNTQRDLDEAKRKRLELEKENDSLNTEAIQVRKKNKRLLRNIANLHEEIEAKK

KAA0033221.1 uncharacterized protein E6C27_scaffold845G00100 [Cucumis melo var. makuwa]2.50e-14966.92Show/hide
Query:  MAETFRSLNHCRIQGKGKFFSCAPMLFIWISSHLRYPNNFGYPQIKFSSPWNKTRNTIREFNSAHWDPKDPEFGVWMQFFSHLTTIEAIWRAPWMPTSPL
        MAETFRSLNHCRIQGKGKFFSCAPMLFIWISSHLRYPNNFGYPQIKF+SPWNKTRNTIREFNSAHWDPKDPEFG +                        
Subjt:  MAETFRSLNHCRIQGKGKFFSCAPMLFIWISSHLRYPNNFGYPQIKFSSPWNKTRNTIREFNSAHWDPKDPEFGVWMQFFSHLTTIEAIWRAPWMPTSPL

Query:  TYRCGKLAFIPLLGLWGGIAYSPLLVLRQSWSKQFAPVVCGLEDWEFSYESNIANDKIHEAVEAWKFVKKMKSLRHCE----------------------
                        GGIAYSPLLVLRQSWSKQFAPVVCGLEDWEFSYESNIANDKIHEAVEAWKFVKKMKSLRHCE                      
Subjt:  TYRCGKLAFIPLLGLWGGIAYSPLLVLRQSWSKQFAPVVCGLEDWEFSYESNIANDKIHEAVEAWKFVKKMKSLRHCE----------------------

Query:  ESLVPNIELKKYHDQEKELKRLREMNCVLATENEKLREEVKKWVQQAVNTQRDLDEAKRKRLE----------------------------LEKENDSLN
        ESLVPNIELKKYHD+EKELKRLREMNCVLATENEKLREEVKKWVQQAVNT RDLDEAKRKRLE                            L+K  +S  
Subjt:  ESLVPNIELKKYHDQEKELKRLREMNCVLATENEKLREEVKKWVQQAVNTQRDLDEAKRKRLE----------------------------LEKENDSLN

Query:  TEAIQVRKKNKRLLRNIANLHEEIEAK-------KDEYETLRRKYDDAIRRMERGAEKLRQMASVADQFSVQARTLRQGVIPTRDTDEELSHFLGIIGQC
        ++ +  RK  + +  + A L E+ +         KDEYETLRRKYDDAI RMERGAEKLRQMA VADQFSVQARTLRQGVIPTRDTD+ELSHFLGIIGQC
Subjt:  TEAIQVRKKNKRLLRNIANLHEEIEAK-------KDEYETLRRKYDDAIRRMERGAEKLRQMASVADQFSVQARTLRQGVIPTRDTDEELSHFLGIIGQC

Query:  LG
        LG
Subjt:  LG

KAA0065295.1 uncharacterized protein E6C27_scaffold1023G00080 [Cucumis melo var. makuwa]8.05e-8198.31Show/hide
Query:  MAETFRSLNHCRIQGKGKFFSCAPMLFIWISSHLRYPNNFGYPQIKFSSPWNKTRNTIREFNSAHWDPKDPEFGVWMQFFSHLTTIEAIWRAPWMPTSPL
        MAETFRSLNHC+IQGKGKFFSCAPMLFIWISSHLRYPNNFGYPQIKFSSPWNKTRNTIREFNSAHWDPKDPEFGVWMQFFSHLTTIEAIWRAPWMPTSPL
Subjt:  MAETFRSLNHCRIQGKGKFFSCAPMLFIWISSHLRYPNNFGYPQIKFSSPWNKTRNTIREFNSAHWDPKDPEFGVWMQFFSHLTTIEAIWRAPWMPTSPL

Query:  TYRCGKLAFIPLLGLWGG
        TYRCGKLAFI LLGLWGG
Subjt:  TYRCGKLAFIPLLGLWGG

TYK16834.1 glial fibrillary acidic protein-like [Cucumis melo var. makuwa]1.97e-17788.04Show/hide
Query:  MAETFRSLNHCRIQGKGKFFSCAPMLFIWISSHLRYPNNFGYPQIKFSSPWNKTRNTIREFNSAHWDPKDPEFGVWMQFFSHLTTIEAIWRAPWMPTSPL
        M ETFRSLNHCRIQGKGKFFSCAPMLFIWISSHLRYPNNFGY QIKFSSPWN TRNTIREFNSAHWDPKD EFGVWMQFFSHLTTI+AIWRAPWM TSPL
Subjt:  MAETFRSLNHCRIQGKGKFFSCAPMLFIWISSHLRYPNNFGYPQIKFSSPWNKTRNTIREFNSAHWDPKDPEFGVWMQFFSHLTTIEAIWRAPWMPTSPL

Query:  TYRCGKLAFIPLLGLWGG-IAYSPLLVLRQSWSKQFAPVVCGLEDWEFSYESNIANDKIHEAVEAWKFVKKMKSLRHCE---------------------
        T+RCGKLA I LLGLWGG IAYSPLLVLRQSWSKQFAPVVCGLEDWEFSYESNIAN+KIHEAVEAWKFVKKMKSLRHCE                     
Subjt:  TYRCGKLAFIPLLGLWGG-IAYSPLLVLRQSWSKQFAPVVCGLEDWEFSYESNIANDKIHEAVEAWKFVKKMKSLRHCE---------------------

Query:  -ESLVPNIELKKYHDQEKELKRLREMNCVLATENEKLREEVKKWVQQAVNTQRDLDEAKRKRLELEKENDSLNTEAIQVRKKNKRLLRNIANLHEEIEAK
         ESLVPNIELKKYHD+EKELKRLREMNCV+ATENEKLREEVKKWVQQAVNTQRDLDEAKRK LELEKENDSLNTEAIQVRKKNKRLLRNIANLHEEIEAK
Subjt:  -ESLVPNIELKKYHDQEKELKRLREMNCVLATENEKLREEVKKWVQQAVNTQRDLDEAKRKRLELEKENDSLNTEAIQVRKKNKRLLRNIANLHEEIEAK

Query:  K
        K
Subjt:  K

TrEMBL top hitse value%identityAlignment
A0A5A7SM49 Glial fibrillary acidic protein-like2.9e-5857.48Show/hide
Query:  MNCVLATENEKLREEVKKWVQQAVNTQRDLDEAKRKRLELEKENDSLNTEAIQVRKKNKRLLRNIANLHEEIEAK-------------------------
        MNCVLATENEKLREEVKKWVQQAVN QRDLDEAKRKRLELEKENDSLNTEAIQVRKKNKRLLRNIANLHEEIEA+                         
Subjt:  MNCVLATENEKLREEVKKWVQQAVNTQRDLDEAKRKRLELEKENDSLNTEAIQVRKKNKRLLRNIANLHEEIEAK-------------------------

Query:  --------------------------------------------------------------------------------KDEYETLRRKYDDAIRRMER
                                                                                        KDEYETLRRKYDDAIRRMER
Subjt:  --------------------------------------------------------------------------------KDEYETLRRKYDDAIRRMER

Query:  GAEKLRQMASVADQFSVQARTLRQGVIPTRDTDEELSHFLGIIGQCLGRFGCYH
        GAEKLRQMASVADQFSVQARTLRQGVIPTRD DEELSHFLGIIGQCLGRFGCYH
Subjt:  GAEKLRQMASVADQFSVQARTLRQGVIPTRDTDEELSHFLGIIGQCLGRFGCYH

A0A5A7SNY0 Glial fibrillary acidic protein-like3.9e-7960.53Show/hide
Query:  MAETFRSLNHCRIQGKGKFFSCAPMLFIWISSHLRYPNNFGYPQIKFSSPWNKTRNTIREFNSAHWDPKDPEFGVWMQFFSHLTTIEAIWRAPWMPTSPL
        M ETFRSLNHCRIQ                                   P+N  R  +     AH     P                 +W+  + PT   
Subjt:  MAETFRSLNHCRIQGKGKFFSCAPMLFIWISSHLRYPNNFGYPQIKFSSPWNKTRNTIREFNSAHWDPKDPEFGVWMQFFSHLTTIEAIWRAPWMPTSPL

Query:  TYRCGKLAFIPLLGLWGGIAYSPLLVLRQSWSKQFAPVVCGLEDWEFSYESNIANDKIHEAVEAWKFVKKMKSLRHCE----------------------
                 I L+G  GGIAYSPLLVLRQSWSKQFAPVVCGLEDWEFSYESNIAN+KIHEAVEAWKFVKKMKSLRHCE                      
Subjt:  TYRCGKLAFIPLLGLWGGIAYSPLLVLRQSWSKQFAPVVCGLEDWEFSYESNIANDKIHEAVEAWKFVKKMKSLRHCE----------------------

Query:  ESLVPNIELKKYHDQEKELKRLREMNCVLATENEKLREEVKKWVQQAVNTQRDLDEAKRKRLELEKENDSLNTEAIQVRKKNKRLLRNIANLHEEIEAKK
        ESLVPNIELKKYHD+EKELKRLREMNCV+ATENEKLREEVKKWVQQAVNTQRDLDEAKRK LELEKENDSLNTEAIQVRKKNKRLLRNIANLHEEIEAKK
Subjt:  ESLVPNIELKKYHDQEKELKRLREMNCVLATENEKLREEVKKWVQQAVNTQRDLDEAKRKRLELEKENDSLNTEAIQVRKKNKRLLRNIANLHEEIEAKK

Query:  DEYE
           E
Subjt:  DEYE

A0A5A7SUT0 Reverse transcriptase4.2e-13466.92Show/hide
Query:  MAETFRSLNHCRIQGKGKFFSCAPMLFIWISSHLRYPNNFGYPQIKFSSPWNKTRNTIREFNSAHWDPKDPEFGVWMQFFSHLTTIEAIWRAPWMPTSPL
        MAETFRSLNHCRIQGKGKFFSCAPMLFIWISSHLRYPNNFGYPQIKF+SPWNKTRNTIREFNSAHWDPKDPEFG +                        
Subjt:  MAETFRSLNHCRIQGKGKFFSCAPMLFIWISSHLRYPNNFGYPQIKFSSPWNKTRNTIREFNSAHWDPKDPEFGVWMQFFSHLTTIEAIWRAPWMPTSPL

Query:  TYRCGKLAFIPLLGLWGGIAYSPLLVLRQSWSKQFAPVVCGLEDWEFSYESNIANDKIHEAVEAWKFVKKMKSLRHCE----------------------
                        GGIAYSPLLVLRQSWSKQFAPVVCGLEDWEFSYESNIANDKIHEAVEAWKFVKKMKSLRHCE                      
Subjt:  TYRCGKLAFIPLLGLWGGIAYSPLLVLRQSWSKQFAPVVCGLEDWEFSYESNIANDKIHEAVEAWKFVKKMKSLRHCE----------------------

Query:  ESLVPNIELKKYHDQEKELKRLREMNCVLATENEKLREEVKKWVQQAVNTQRDLDEAKRKRLE----------------------------LEKENDSLN
        ESLVPNIELKKYHD+EKELKRLREMNCVLATENEKLREEVKKWVQQAVNT RDLDEAKRKRLE                            L+K  +S  
Subjt:  ESLVPNIELKKYHDQEKELKRLREMNCVLATENEKLREEVKKWVQQAVNTQRDLDEAKRKRLE----------------------------LEKENDSLN

Query:  TEAIQVRKKNKRLLRNIANLHEEIEAK-------KDEYETLRRKYDDAIRRMERGAEKLRQMASVADQFSVQARTLRQGVIPTRDTDEELSHFLGIIGQC
        ++ +  RK  + +  + A L E+ +         KDEYETLRRKYDDAI RMERGAEKLRQMA VADQFSVQARTLRQGVIPTRDTD+ELSHFLGIIGQC
Subjt:  TEAIQVRKKNKRLLRNIANLHEEIEAK-------KDEYETLRRKYDDAIRRMERGAEKLRQMASVADQFSVQARTLRQGVIPTRDTDEELSHFLGIIGQC

Query:  LG
        LG
Subjt:  LG

A0A5A7VHI3 Uncharacterized protein7.6e-6798.31Show/hide
Query:  MAETFRSLNHCRIQGKGKFFSCAPMLFIWISSHLRYPNNFGYPQIKFSSPWNKTRNTIREFNSAHWDPKDPEFGVWMQFFSHLTTIEAIWRAPWMPTSPL
        MAETFRSLNHC+IQGKGKFFSCAPMLFIWISSHLRYPNNFGYPQIKFSSPWNKTRNTIREFNSAHWDPKDPEFGVWMQFFSHLTTIEAIWRAPWMPTSPL
Subjt:  MAETFRSLNHCRIQGKGKFFSCAPMLFIWISSHLRYPNNFGYPQIKFSSPWNKTRNTIREFNSAHWDPKDPEFGVWMQFFSHLTTIEAIWRAPWMPTSPL

Query:  TYRCGKLAFIPLLGLWGG
        TYRCGKLAFI LLGLWGG
Subjt:  TYRCGKLAFIPLLGLWGG

A0A5D3D0S2 Glial fibrillary acidic protein-like4.8e-14687.21Show/hide
Query:  MAETFRSLNHCRIQGKGKFFSCAPMLFIWISSHLRYPNNFGYPQIKFSSPWNKTRNTIREFNSAHWDPKDPEFGVWMQFFSHLTTIEAIWRAPWMPTSPL
        M ETFRSLNHCRIQGKGKFFSCAPMLFIWISSHLRYPNNFGY QIKFSSPWN TRNTIREFNSAHWDPKD EFGVWMQFFSHLTTI+AIWRAPWM TSPL
Subjt:  MAETFRSLNHCRIQGKGKFFSCAPMLFIWISSHLRYPNNFGYPQIKFSSPWNKTRNTIREFNSAHWDPKDPEFGVWMQFFSHLTTIEAIWRAPWMPTSPL

Query:  TYRCGKLAFIPLLGLW-GGIAYSPLLVLRQSWSKQFAPVVCGLEDWEFSYESNIANDKIHEAVEAWKFVKKMKSLRHCE---------------------
        T+RCGKLA I LLGLW GGIAYSPLLVLRQSWSKQFAPVVCGLEDWEFSYESNIAN+KIHEAVEAWKFVKKMKSLRHCE                     
Subjt:  TYRCGKLAFIPLLGLW-GGIAYSPLLVLRQSWSKQFAPVVCGLEDWEFSYESNIANDKIHEAVEAWKFVKKMKSLRHCE---------------------

Query:  -ESLVPNIELKKYHDQEKELKRLREMNCVLATENEKLREEVKKWVQQAVNTQRDLDEAKRKRLELEKENDSLNTEAIQVRKKNKRLLRNIANLHEEIEAK
         ESLVPNIELKKYHD+EKELKRLREMNCV+ATENEKLREEVKKWVQQAVNTQRDLDEAKRK LELEKENDSLNTEAIQVRKKNKRLLRNIANLHEEIEAK
Subjt:  -ESLVPNIELKKYHDQEKELKRLREMNCVLATENEKLREEVKKWVQQAVNTQRDLDEAKRKRLELEKENDSLNTEAIQVRKKNKRLLRNIANLHEEIEAK

Query:  KDEYE
        K   E
Subjt:  KDEYE

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGCAGAGACTTTCAGATCACTAAATCATTGTCGAATCCAAGGTAAAGGAAAATTCTTCAGCTGTGCTCCAATGCTCTTCATTTGGATTTCCAGTCATTTAAGGTATCC
TAATAATTTTGGATATCCTCAAATAAAATTTAGCAGTCCATGGAATAAGACAAGAAACACTATCAGAGAATTCAATAGTGCACACTGGGATCCAAAGGATCCAGAATTTG
GGGTTTGGATGCAGTTTTTCAGCCATTTAACGACAATAGAAGCAATTTGGAGAGCCCCTTGGATGCCCACAAGTCCTTTGACATACCGTTGTGGGAAGTTGGCTTTTATC
CCACTATTAGGCTTATGGGGGGGCATTGCTTATTCTCCTCTTTTGGTATTACGTCAATCATGGTCAAAACAATTTGCGCCAGTTGTATGTGGGTTAGAAGATTGGGAATT
CTCATATGAGTCCAACATAGCAAATGATAAAATTCACGAAGCAGTCGAGGCATGGAAATTTGTAAAGAAGATGAAAAGTTTGCGACATTGTGAGGAATCCTTAGTTCCAA
ACATAGAATTGAAGAAATATCATGATCAAGAAAAGGAATTAAAGCGATTAAGAGAAATGAATTGTGTTTTGGCAACAGAGAACGAAAAGTTAAGAGAAGAAGTCAAGAAA
TGGGTCCAGCAAGCTGTTAATACTCAAAGAGATTTAGACGAGGCAAAACGAAAGCGATTGGAGTTGGAGAAGGAAAACGATTCTTTAAACACTGAGGCAATCCAAGTGAG
AAAAAAGAATAAGAGGTTATTAAGGAATATTGCTAACTTACATGAAGAGATAGAAGCTAAAAAGGACGAGTACGAGACATTGAGACGAAAGTATGATGATGCTATAAGAC
GGATGGAACGAGGGGCTGAAAAATTAAGACAAATGGCGAGTGTGGCAGATCAATTCTCAGTGCAAGCTAGGACTCTCCGGCAAGGTGTTATACCTACCCGCGACACCGAT
GAAGAATTGTCTCATTTTCTAGGAATCATAGGGCAGTGCCTCGGACGTTTTGGGTGCTACCATTAG
mRNA sequenceShow/hide mRNA sequence
ATGGCAGAGACTTTCAGATCACTAAATCATTGTCGAATCCAAGGTAAAGGAAAATTCTTCAGCTGTGCTCCAATGCTCTTCATTTGGATTTCCAGTCATTTAAGGTATCC
TAATAATTTTGGATATCCTCAAATAAAATTTAGCAGTCCATGGAATAAGACAAGAAACACTATCAGAGAATTCAATAGTGCACACTGGGATCCAAAGGATCCAGAATTTG
GGGTTTGGATGCAGTTTTTCAGCCATTTAACGACAATAGAAGCAATTTGGAGAGCCCCTTGGATGCCCACAAGTCCTTTGACATACCGTTGTGGGAAGTTGGCTTTTATC
CCACTATTAGGCTTATGGGGGGGCATTGCTTATTCTCCTCTTTTGGTATTACGTCAATCATGGTCAAAACAATTTGCGCCAGTTGTATGTGGGTTAGAAGATTGGGAATT
CTCATATGAGTCCAACATAGCAAATGATAAAATTCACGAAGCAGTCGAGGCATGGAAATTTGTAAAGAAGATGAAAAGTTTGCGACATTGTGAGGAATCCTTAGTTCCAA
ACATAGAATTGAAGAAATATCATGATCAAGAAAAGGAATTAAAGCGATTAAGAGAAATGAATTGTGTTTTGGCAACAGAGAACGAAAAGTTAAGAGAAGAAGTCAAGAAA
TGGGTCCAGCAAGCTGTTAATACTCAAAGAGATTTAGACGAGGCAAAACGAAAGCGATTGGAGTTGGAGAAGGAAAACGATTCTTTAAACACTGAGGCAATCCAAGTGAG
AAAAAAGAATAAGAGGTTATTAAGGAATATTGCTAACTTACATGAAGAGATAGAAGCTAAAAAGGACGAGTACGAGACATTGAGACGAAAGTATGATGATGCTATAAGAC
GGATGGAACGAGGGGCTGAAAAATTAAGACAAATGGCGAGTGTGGCAGATCAATTCTCAGTGCAAGCTAGGACTCTCCGGCAAGGTGTTATACCTACCCGCGACACCGAT
GAAGAATTGTCTCATTTTCTAGGAATCATAGGGCAGTGCCTCGGACGTTTTGGGTGCTACCATTAG
Protein sequenceShow/hide protein sequence
MAETFRSLNHCRIQGKGKFFSCAPMLFIWISSHLRYPNNFGYPQIKFSSPWNKTRNTIREFNSAHWDPKDPEFGVWMQFFSHLTTIEAIWRAPWMPTSPLTYRCGKLAFI
PLLGLWGGIAYSPLLVLRQSWSKQFAPVVCGLEDWEFSYESNIANDKIHEAVEAWKFVKKMKSLRHCEESLVPNIELKKYHDQEKELKRLREMNCVLATENEKLREEVKK
WVQQAVNTQRDLDEAKRKRLELEKENDSLNTEAIQVRKKNKRLLRNIANLHEEIEAKKDEYETLRRKYDDAIRRMERGAEKLRQMASVADQFSVQARTLRQGVIPTRDTD
EELSHFLGIIGQCLGRFGCYH