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IVF0018966 (gene) of Melon (IVF77) v1 genome

Gene IDIVF0018966
OrganismCucumis melo ssp. agrestis cv. IVF77 (Melon (IVF77) v1)
DescriptionRetrovirus-related Pol polyprotein from transposon TNT 1-94
Genome locationchr03:7907074..7907409
RNA-Seq ExpressionIVF0018966
SyntenyIVF0018966
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0031930.1 NBS-LRR type resistance protein [Cucumis melo var. makuwa]5.91e-0571.43Show/hide
Query:  CP--FVDAGMATADAAPPRQRRPMAGRARGTQKKDGRGRLSL
        CP  +VDA   T DAA  RQRRPMA RARGTQKKDGR RL L
Subjt:  CP--FVDAGMATADAAPPRQRRPMAGRARGTQKKDGRGRLSL

KAA0052783.1 NBS-LRR type resistance protein [Cucumis melo var. makuwa]2.03e-0438.61Show/hide
Query:  FVDAGMATADAAPPRQRRPMAGRARGTQKKDGRGRLSL---------WLPVGEV------RMEKNGRSSKAYGWRLCSSGEEAEEKKKKKRWRRRFVKAV
        ++D    T D   PRQRRPMAGRA  TQKKDGR R+ L         WL  GE+      R  + G +  +   R C      EE ++ +R RR    AV
Subjt:  FVDAGMATADAAPPRQRRPMAGRARGTQKKDGRGRLSL---------WLPVGEV------RMEKNGRSSKAYGWRLCSSGEEAEEKKKKKRWRRRFVKAV

Query:  G
        G
Subjt:  G

KAA0066232.1 transposase [Cucumis melo var. makuwa]2.07e-1091.18Show/hide
Query:  MDCPFVDAGMATADAAPPRQRRPMAGRARGTQKK
        M CP+VDAGMATADAAPPRQRRPMAGRARGT+KK
Subjt:  MDCPFVDAGMATADAAPPRQRRPMAGRARGTQKK

KAA0067956.1 NBS-LRR type resistance protein [Cucumis melo var. makuwa]1.87e-1077.27Show/hide
Query:  MDCP--FVDAGMATADAAPPRQRRPMAGRARGTQKKDGRGRLSL
        M CP  +VDA   TADA PPRQ+RPMAGRARGTQKK+GRGRLSL
Subjt:  MDCP--FVDAGMATADAAPPRQRRPMAGRARGTQKKDGRGRLSL

TYK17960.1 Retrovirus-related Pol polyprotein from transposon TNT 1-94 [Cucumis melo var. makuwa]7.40e-0673.68Show/hide
Query:  FVDAGMATADAAPPRQRRPMAGRARGTQKKDGRGRLSL
        +VDA   T D   PRQRRPMAGRARGTQKKDGR RL L
Subjt:  FVDAGMATADAAPPRQRRPMAGRARGTQKKDGRGRLSL

TrEMBL top hitse value%identityAlignment
A0A5A7VD11 Transposase1.3e-0791.18Show/hide
Query:  MDCPFVDAGMATADAAPPRQRRPMAGRARGTQKK
        M CP+VDAGMATADAAPPRQRRPMAGRARGT+KK
Subjt:  MDCPFVDAGMATADAAPPRQRRPMAGRARGTQKK

A0A5A7VN13 NBS-LRR type resistance protein1.3e-0777.27Show/hide
Query:  MDCP--FVDAGMATADAAPPRQRRPMAGRARGTQKKDGRGRLSL
        M CP  +VDA   TADA PPRQ+RPMAGRARGTQKK+GRGRLSL
Subjt:  MDCP--FVDAGMATADAAPPRQRRPMAGRARGTQKKDGRGRLSL

A0A5D3D2P4 Retrovirus-related Pol polyprotein from transposon TNT 1-942.2e-0473.68Show/hide
Query:  FVDAGMATADAAPPRQRRPMAGRARGTQKKDGRGRLSL
        +VDA   T D   PRQRRPMAGRARGTQKKDGR RL L
Subjt:  FVDAGMATADAAPPRQRRPMAGRARGTQKKDGRGRLSL

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGATTGCCCTTTCGTCGATGCTGGTATGGCGACAGCCGACGCCGCACCACCGAGGCAGAGACGGCCGATGGCTGGCCGTGCACGCGGAACCCAGAAGAAGGACGGTCG
GGGACGGCTGTCGCTGTGGCTTCCCGTCGGTGAGGTGCGGATGGAGAAAAACGGGCGGTCGTCGAAGGCGTACGGATGGCGTCTGTGTTCGTCGGGTGAAGAAGCCGAAG
AGAAGAAGAAGAAGAAGAGATGGCGGCGGCGCTTCGTGAAGGCGGTGGGGAAGAAAGCCTCGGGGTCGTGCGGCGGCGCAAGGGAGAAAGCGAAAATGGATGGCTCGCGC
GCGTAG
mRNA sequenceShow/hide mRNA sequence
ATGGATTGCCCTTTCGTCGATGCTGGTATGGCGACAGCCGACGCCGCACCACCGAGGCAGAGACGGCCGATGGCTGGCCGTGCACGCGGAACCCAGAAGAAGGACGGTCG
GGGACGGCTGTCGCTGTGGCTTCCCGTCGGTGAGGTGCGGATGGAGAAAAACGGGCGGTCGTCGAAGGCGTACGGATGGCGTCTGTGTTCGTCGGGTGAAGAAGCCGAAG
AGAAGAAGAAGAAGAAGAGATGGCGGCGGCGCTTCGTGAAGGCGGTGGGGAAGAAAGCCTCGGGGTCGTGCGGCGGCGCAAGGGAGAAAGCGAAAATGGATGGCTCGCGC
GCGTAG
Protein sequenceShow/hide protein sequence
MDCPFVDAGMATADAAPPRQRRPMAGRARGTQKKDGRGRLSLWLPVGEVRMEKNGRSSKAYGWRLCSSGEEAEEKKKKKRWRRRFVKAVGKKASGSCGGAREKAKMDGSR
A