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IVF0018983 (gene) of Melon (IVF77) v1 genome

Gene IDIVF0018983
OrganismCucumis melo ssp. agrestis cv. IVF77 (Melon (IVF77) v1)
DescriptionGag-pol polyprotein
Genome locationchr03:16730312..16730675
RNA-Seq ExpressionIVF0018983
SyntenyIVF0018983
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0035847.1 putative mitochondrial protein [Cucumis melo var. makuwa]6.72e-2959.46Show/hide
Query:  MDDEKELFFQPLGSTTSVVQTIVVAPLVDTRVLNDDNSSSFVQKELTSNVVGNAPSSH----------------------KDRIDYAKLIANIRYTSSIK
        MDD +ELFFQ   ST   +QTI V P VDT VLNDDNSSS  QKELT NVVGN PSSH                      KD+IDYAKLIANI YTSSI+
Subjt:  MDDEKELFFQPLGSTTSVVQTIVVAPLVDTRVLNDDNSSSFVQKELTSNVVGNAPSSH----------------------KDRIDYAKLIANIRYTSSIK

Query:  PTFVNEALKDE
        PT VNEAL++E
Subjt:  PTFVNEALKDE

KAA0051617.1 putative mitochondrial protein [Cucumis melo var. makuwa]5.72e-1565.15Show/hide
Query:  SFVQKELTSNVVGNAPSSH-----KDRIDYAKLIANIRYTSSIKPTFVNEALKDEFWINAMQEELL
        S VQK   S+ +   PS+      KD+IDYAK+IANI YTSSI+PT VNEALKDEF INAMQEELL
Subjt:  SFVQKELTSNVVGNAPSSH-----KDRIDYAKLIANIRYTSSIKPTFVNEALKDEFWINAMQEELL

KAA0054957.1 putative mitochondrial protein [Cucumis melo var. makuwa]2.99e-2055Show/hide
Query:  DDEKELFFQP-LGSTTSVVQTIVVAPLVDTRVLNDDNSSSFVQKELTSNVVGNAPSSHKDRIDYAKLIANIRYTSSIKPTFVNEALKDEFWINAMQEELL
        DD+ EL  +P +    ++  T+ V    DT V N D+SS   QK+   +V+       KD+IDYAK+IANI YTSSIKPT VNEALKDEFWINAMQEELL
Subjt:  DDEKELFFQP-LGSTTSVVQTIVVAPLVDTRVLNDDNSSSFVQKELTSNVVGNAPSSHKDRIDYAKLIANIRYTSSIKPTFVNEALKDEFWINAMQEELL

TYK22672.1 gag-pol polyprotein [Cucumis melo var. makuwa]8.61e-1742.98Show/hide
Query:  MDDEKELFFQPLGSTTSVVQTIVV--APLVDTRVLNDDNSSSFVQKELTSNVVGNAPSSH----------------------KDRIDYAKLIANIRYTSS
        +DD+ +   +P     ++V  + +  +P VDT V N D+SS   QKE+ ++V    PSSH                      KD+IDYAK+IANI YTS 
Subjt:  MDDEKELFFQPLGSTTSVVQTIVV--APLVDTRVLNDDNSSSFVQKELTSNVVGNAPSSH----------------------KDRIDYAKLIANIRYTSS

Query:  IKPTFVNEALKDEFWINAMQE
        I+PT VNE LKDEFWINAM E
Subjt:  IKPTFVNEALKDEFWINAMQE

TYK27718.1 putative mitochondrial protein [Cucumis melo var. makuwa]1.31e-2652.46Show/hide
Query:  MDDEKELFFQPLGSTTSVVQTIVVAPLVDTRVLNDDNSSSFVQKELTSNVVGNAPSSH----------------------KDRIDYAKLIANIRYTSSIK
        MDDE+EL FQP  S     Q+    P V+T V+++ NSS   QKE+ SN  GN+PSSH                      KD+IDYAKLIANI YTSSI+
Subjt:  MDDEKELFFQPLGSTTSVVQTIVVAPLVDTRVLNDDNSSSFVQKELTSNVVGNAPSSH----------------------KDRIDYAKLIANIRYTSSIK

Query:  PTFVNEALKDEFWINAMQEELL
        PT +NEA KD+FWINAMQEELL
Subjt:  PTFVNEALKDEFWINAMQEELL

TrEMBL top hitse value%identityAlignment
A0A5A7UD67 Putative mitochondrial protein6.4e-1143.44Show/hide
Query:  DDEKELFFQPLGSTTSVVQTIVV-APLVDTRVLNDDNSSSFVQKELTSNVVGNAPSSH----------------------KDRIDYAKLIANIRYTSSIK
        DD+ +L        T V++  VV AP V+T V + ++SS   QKE+  +V    PSSH                      KD+IDYAK+I +I YTSSI+
Subjt:  DDEKELFFQPLGSTTSVVQTIVV-APLVDTRVLNDDNSSSFVQKELTSNVVGNAPSSH----------------------KDRIDYAKLIANIRYTSSIK

Query:  PTFVNEALKDEFWINAMQEELL
        PT  NEA KDEF IN MQEELL
Subjt:  PTFVNEALKDEFWINAMQEELL

A0A5D3DGF1 Gag-pol polyprotein6.8e-1342.98Show/hide
Query:  MDDEKELFFQPLGSTTSVVQTIVV--APLVDTRVLNDDNSSSFVQKELTSNVVGNAPSSH----------------------KDRIDYAKLIANIRYTSS
        +DD+ +   +P     ++V  + +  +P VDT V N D+SS   QKE+ ++V    PSSH                      KD+IDYAK+IANI YTS 
Subjt:  MDDEKELFFQPLGSTTSVVQTIVV--APLVDTRVLNDDNSSSFVQKELTSNVVGNAPSSH----------------------KDRIDYAKLIANIRYTSS

Query:  IKPTFVNEALKDEFWINAMQE
        I+PT VNE LKDEFWINAM E
Subjt:  IKPTFVNEALKDEFWINAMQE

A0A5D3DGL3 Putative mitochondrial protein2.5e-1554.46Show/hide
Query:  DDEKELFFQPLGSTTSVVQTIVVAP--LVDTRVLNDDNSSSFVQKELTSNVVGNAPSSHKDRIDYAKLIANIRYTSSIKPTFVNEALKDEFWINAMQEEL
        DD+ EL  +P     ++V  + +     VDT V N D+SS   QK+   +V+       KD+IDYAK+IANI YTSSIKPT VNEALKDEFWINAMQEEL
Subjt:  DDEKELFFQPLGSTTSVVQTIVVAP--LVDTRVLNDDNSSSFVQKELTSNVVGNAPSSHKDRIDYAKLIANIRYTSSIKPTFVNEALKDEFWINAMQEEL

Query:  L
        L
Subjt:  L

A0A5D3DW56 Putative mitochondrial protein6.2e-2252.46Show/hide
Query:  MDDEKELFFQPLGSTTSVVQTIVVAPLVDTRVLNDDNSSSFVQKELTSNVVGNAPSSH----------------------KDRIDYAKLIANIRYTSSIK
        MDDE+EL FQP  S     Q+    P V+T V+++ NSS   QKE+ SN  GN+PSSH                      KD+IDYAKLIANI YTSSI+
Subjt:  MDDEKELFFQPLGSTTSVVQTIVVAPLVDTRVLNDDNSSSFVQKELTSNVVGNAPSSH----------------------KDRIDYAKLIANIRYTSSIK

Query:  PTFVNEALKDEFWINAMQEELL
        PT +NEA KD+FWINAMQEELL
Subjt:  PTFVNEALKDEFWINAMQEELL

A0A5D3E335 Putative mitochondrial protein3.1e-2159.46Show/hide
Query:  MDDEKELFFQPLGSTTSVVQTIVVAPLVDTRVLNDDNSSSFVQKELTSNVVGNAPSSH----------------------KDRIDYAKLIANIRYTSSIK
        MDD +ELFFQ   ST   +QTI V P VDT VLNDDNSSS  QKELT NVVGN PSSH                      KD+IDYAKLIANI YTSSI+
Subjt:  MDDEKELFFQPLGSTTSVVQTIVVAPLVDTRVLNDDNSSSFVQKELTSNVVGNAPSSH----------------------KDRIDYAKLIANIRYTSSIK

Query:  PTFVNEALKDE
        PT VNEAL++E
Subjt:  PTFVNEALKDE

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGATGATGAGAAAGAGTTATTTTTTCAACCATTAGGCAGCACTACTTCTGTCGTACAAACTATTGTTGTTGCTCCTTTAGTTGATACTCGTGTTTTGAATGATGATAA
CAGCTCAAGTTTTGTCCAAAAGGAGTTAACTTCTAATGTAGTCGGAAATGCTCCTTCATCACATAAGGATAGGATAGATTATGCCAAATTAATTGCTAATATTCGTTACA
CATCTTCCATTAAGCCTACATTTGTAAATGAAGCTCTCAAAGACGAGTTCTGGATAAATGCCATGCAAGAAGAGCTATTATGA
mRNA sequenceShow/hide mRNA sequence
ATGGATGATGAGAAAGAGTTATTTTTTCAACCATTAGGCAGCACTACTTCTGTCGTACAAACTATTGTTGTTGCTCCTTTAGTTGATACTCGTGTTTTGAATGATGATAA
CAGCTCAAGTTTTGTCCAAAAGGAGTTAACTTCTAATGTAGTCGGAAATGCTCCTTCATCACATAAGGATAGGATAGATTATGCCAAATTAATTGCTAATATTCGTTACA
CATCTTCCATTAAGCCTACATTTGTAAATGAAGCTCTCAAAGACGAGTTCTGGATAAATGCCATGCAAGAAGAGCTATTATGA
Protein sequenceShow/hide protein sequence
MDDEKELFFQPLGSTTSVVQTIVVAPLVDTRVLNDDNSSSFVQKELTSNVVGNAPSSHKDRIDYAKLIANIRYTSSIKPTFVNEALKDEFWINAMQEELL