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IVF0018996 (gene) of Melon (IVF77) v1 genome

Gene IDIVF0018996
OrganismCucumis melo ssp. agrestis cv. IVF77 (Melon (IVF77) v1)
Descriptionras-related protein Rab11C-like
Genome locationchr11:13524459..13526435
RNA-Seq ExpressionIVF0018996
SyntenyIVF0018996
Gene Ontology termsGO:0006468 - protein phosphorylation (biological process)
GO:0006825 - copper ion transport (biological process)
GO:0016021 - integral component of membrane (cellular component)
GO:0003924 - GTPase activity (molecular function)
GO:0004672 - protein kinase activity (molecular function)
GO:0005524 - ATP binding (molecular function)
GO:0005525 - GTP binding (molecular function)
InterPro domainsIPR001806 - Small GTPase
IPR027417 - P-loop containing nucleoside triphosphate hydrolase


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0052805.1 ras-related protein Rab11C-like isoform X2 [Cucumis melo var. makuwa]2.62e-4892.77Show/hide
Query:  RNETNFCSYGKVNREVQLHCPPRGLFKKSRVETTMAHKVDHEYDYLFKIVSIGDSGVGKSNILSRFTRNEFYLESKSTIDLLG
        RNETNFCSYGKVNREVQ+HCPPRGLFKKSR ET MAHKVDHEYDYLFKIV IGDS VGKSNILSRFTRNEF LESKSTIDLLG
Subjt:  RNETNFCSYGKVNREVQLHCPPRGLFKKSRVETTMAHKVDHEYDYLFKIVSIGDSGVGKSNILSRFTRNEFYLESKSTIDLLG

TYK01106.1 ras-related protein Rab11C-like [Cucumis melo var. makuwa]2.01e-34100Show/hide
Query:  GLFKKSRVETTMAHKVDHEYDYLFKIVSIGDSGVGKSNILSRFTRNEFYLESKSTIDLLG
        GLFKKSRVETTMAHKVDHEYDYLFKIVSIGDSGVGKSNILSRFTRNEFYLESKSTIDLLG
Subjt:  GLFKKSRVETTMAHKVDHEYDYLFKIVSIGDSGVGKSNILSRFTRNEFYLESKSTIDLLG

XP_008448132.1 PREDICTED: ras-related protein Rab11C-like [Cucumis melo]7.30e-5596.55Show/hide
Query:  ICSYRNETNFCSYGKVNREVQLHCPPRGLFKKSRVETTMAHKVDHEYDYLFKIVSIGDSGVGKSNILSRFTRNEFYLESKSTIDLLG
        I + RNETNFCSYGKVNREVQLHCPPRGLFKKSRVETTMAHKVDHEYDYLFKIVSIGDSGVGKSNILSRFTRNEFYLESKSTIDLLG
Subjt:  ICSYRNETNFCSYGKVNREVQLHCPPRGLFKKSRVETTMAHKVDHEYDYLFKIVSIGDSGVGKSNILSRFTRNEFYLESKSTIDLLG

XP_008461753.1 PREDICTED: ras-related protein Rab11C-like isoform X1 [Cucumis melo]1.60e-4992.77Show/hide
Query:  RNETNFCSYGKVNREVQLHCPPRGLFKKSRVETTMAHKVDHEYDYLFKIVSIGDSGVGKSNILSRFTRNEFYLESKSTIDLLG
        RNETNFCSYGKVNREVQ+HCPPRGLFKKSR ET MAHKVDHEYDYLFKIV IGDS VGKSNILSRFTRNEF LESKSTIDLLG
Subjt:  RNETNFCSYGKVNREVQLHCPPRGLFKKSRVETTMAHKVDHEYDYLFKIVSIGDSGVGKSNILSRFTRNEFYLESKSTIDLLG

XP_008461756.1 PREDICTED: ras-related protein Rab11C-like isoform X2 [Cucumis melo]3.95e-5292.05Show/hide
Query:  MICSYRNETNFCSYGKVNREVQLHCPPRGLFKKSRVETTMAHKVDHEYDYLFKIVSIGDSGVGKSNILSRFTRNEFYLESKSTIDLLG
        MI SYRNETNFCSYGKVNREVQ+HCPPRGLFKKSR ET MAHKVDHEYDYLFKIV IGDS VGKSNILSRFTRNEF LESKSTIDLLG
Subjt:  MICSYRNETNFCSYGKVNREVQLHCPPRGLFKKSRVETTMAHKVDHEYDYLFKIVSIGDSGVGKSNILSRFTRNEFYLESKSTIDLLG

TrEMBL top hitse value%identityAlignment
A0A1S3BJ02 ras-related protein Rab11C-like4.0e-4196.55Show/hide
Query:  ICSYRNETNFCSYGKVNREVQLHCPPRGLFKKSRVETTMAHKVDHEYDYLFKIVSIGDSGVGKSNILSRFTRNEFYLESKSTIDLLG
        I + RNETNFCSYGKVNREVQLHCPPRGLFKKSRVETTMAHKVDHEYDYLFKIVSIGDSGVGKSNILSRFTRNEFYLESKSTIDLLG
Subjt:  ICSYRNETNFCSYGKVNREVQLHCPPRGLFKKSRVETTMAHKVDHEYDYLFKIVSIGDSGVGKSNILSRFTRNEFYLESKSTIDLLG

A0A1S3CFF6 ras-related protein Rab11C-like isoform X16.0e-3792.77Show/hide
Query:  RNETNFCSYGKVNREVQLHCPPRGLFKKSRVETTMAHKVDHEYDYLFKIVSIGDSGVGKSNILSRFTRNEFYLESKSTIDLLG
        RNETNFCSYGKVNREVQ+HCPPRGLFKKSR ET MAHKVDHEYDYLFKIV IGDS VGKSNILSRFTRNEF LESKSTIDLLG
Subjt:  RNETNFCSYGKVNREVQLHCPPRGLFKKSRVETTMAHKVDHEYDYLFKIVSIGDSGVGKSNILSRFTRNEFYLESKSTIDLLG

A0A1S3CFW6 ras-related protein Rab11C-like isoform X24.9e-3992.05Show/hide
Query:  MICSYRNETNFCSYGKVNREVQLHCPPRGLFKKSRVETTMAHKVDHEYDYLFKIVSIGDSGVGKSNILSRFTRNEFYLESKSTIDLLG
        MI SYRNETNFCSYGKVNREVQ+HCPPRGLFKKSR ET MAHKVDHEYDYLFKIV IGDS VGKSNILSRFTRNEF LESKSTIDLLG
Subjt:  MICSYRNETNFCSYGKVNREVQLHCPPRGLFKKSRVETTMAHKVDHEYDYLFKIVSIGDSGVGKSNILSRFTRNEFYLESKSTIDLLG

A0A5A7UGE0 Ras-related protein Rab11C-like isoform X26.0e-3792.77Show/hide
Query:  RNETNFCSYGKVNREVQLHCPPRGLFKKSRVETTMAHKVDHEYDYLFKIVSIGDSGVGKSNILSRFTRNEFYLESKSTIDLLG
        RNETNFCSYGKVNREVQ+HCPPRGLFKKSR ET MAHKVDHEYDYLFKIV IGDS VGKSNILSRFTRNEF LESKSTIDLLG
Subjt:  RNETNFCSYGKVNREVQLHCPPRGLFKKSRVETTMAHKVDHEYDYLFKIVSIGDSGVGKSNILSRFTRNEFYLESKSTIDLLG

A0A5D3BS78 Ras-related protein Rab11C-like3.1e-25100Show/hide
Query:  GLFKKSRVETTMAHKVDHEYDYLFKIVSIGDSGVGKSNILSRFTRNEFYLESKSTIDLLG
        GLFKKSRVETTMAHKVDHEYDYLFKIVSIGDSGVGKSNILSRFTRNEFYLESKSTIDLLG
Subjt:  GLFKKSRVETTMAHKVDHEYDYLFKIVSIGDSGVGKSNILSRFTRNEFYLESKSTIDLLG

SwissProt top hitse value%identityAlignment
Q39434 Ras-related protein Rab2BV4.3e-1691.11Show/hide
Query:  MAHKVDHEYDYLFKIVSIGDSGVGKSNILSRFTRNEFYLESKSTI
        MA++VDHEYDYLFKIV IGDSGVGKSNILSRFTRNEF LESKSTI
Subjt:  MAHKVDHEYDYLFKIVSIGDSGVGKSNILSRFTRNEFYLESKSTI

Q40193 Ras-related protein Rab11C6.6e-1793.33Show/hide
Query:  MAHKVDHEYDYLFKIVSIGDSGVGKSNILSRFTRNEFYLESKSTI
        MAH+VDHEYDYLFKIV IGDSGVGKSNILSRFTRNEF LESKSTI
Subjt:  MAHKVDHEYDYLFKIVSIGDSGVGKSNILSRFTRNEFYLESKSTI

Q40523 Ras-related protein Rab11A9.5e-1688.89Show/hide
Query:  MAHKVDHEYDYLFKIVSIGDSGVGKSNILSRFTRNEFYLESKSTI
        MA++VDHEYDYLFK+V IGDSGVGKSNILSRFTRNEF LESKSTI
Subjt:  MAHKVDHEYDYLFKIVSIGDSGVGKSNILSRFTRNEFYLESKSTI

Q96283 Ras-related protein RABA2c1.6e-1588.89Show/hide
Query:  MAHKVDHEYDYLFKIVSIGDSGVGKSNILSRFTRNEFYLESKSTI
        M H+VD EYDYLFKIV IGDSGVGKSNILSRFTRNEF LESKSTI
Subjt:  MAHKVDHEYDYLFKIVSIGDSGVGKSNILSRFTRNEFYLESKSTI

Q9LNW1 Ras-related protein RABA2b5.6e-1688.89Show/hide
Query:  MAHKVDHEYDYLFKIVSIGDSGVGKSNILSRFTRNEFYLESKSTI
        MA+++DHEYDYLFKIV IGDSGVGKSNILSRFTRNEF LESKSTI
Subjt:  MAHKVDHEYDYLFKIVSIGDSGVGKSNILSRFTRNEFYLESKSTI

Arabidopsis top hitse value%identityAlignment
AT1G07410.1 RAB GTPase homolog A2B4.0e-1788.89Show/hide
Query:  MAHKVDHEYDYLFKIVSIGDSGVGKSNILSRFTRNEFYLESKSTI
        MA+++DHEYDYLFKIV IGDSGVGKSNILSRFTRNEF LESKSTI
Subjt:  MAHKVDHEYDYLFKIVSIGDSGVGKSNILSRFTRNEFYLESKSTI

AT1G09630.1 RAB GTPase 11C3.7e-1582.22Show/hide
Query:  MAHKVDHEYDYLFKIVSIGDSGVGKSNILSRFTRNEFYLESKSTI
        MA + D EYDYLFK+V IGDSGVGKSN+LSRFTRNEF LESKSTI
Subjt:  MAHKVDHEYDYLFKIVSIGDSGVGKSNILSRFTRNEFYLESKSTI

AT3G46830.1 RAB GTPase homolog A2C1.2e-1688.89Show/hide
Query:  MAHKVDHEYDYLFKIVSIGDSGVGKSNILSRFTRNEFYLESKSTI
        M H+VD EYDYLFKIV IGDSGVGKSNILSRFTRNEF LESKSTI
Subjt:  MAHKVDHEYDYLFKIVSIGDSGVGKSNILSRFTRNEFYLESKSTI

AT5G59150.1 RAB GTPase homolog A2D5.7e-1684.44Show/hide
Query:  MAHKVDHEYDYLFKIVSIGDSGVGKSNILSRFTRNEFYLESKSTI
        MAH+V+ +YDYLFKIV IGDSGVGK+NILSRFTRNEF LESKSTI
Subjt:  MAHKVDHEYDYLFKIVSIGDSGVGKSNILSRFTRNEFYLESKSTI

AT5G60860.1 RAB GTPase homolog A1F6.3e-1581.82Show/hide
Query:  AHKVDHEYDYLFKIVSIGDSGVGKSNILSRFTRNEFYLESKSTI
        A++ D EYDYLFK+V IGDSGVGKSN+LSRFTRNEF LESKSTI
Subjt:  AHKVDHEYDYLFKIVSIGDSGVGKSNILSRFTRNEFYLESKSTI


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGATTTGTTCTTATAGAAATGAAACAAATTTTTGCTCTTATGGCAAAGTAAACAGAGAAGTTCAACTGCACTGCCCACCAAGAGGTTTGTTCAAGAAATCTAGGGTAGA
GACTACTATGGCTCATAAGGTAGACCACGAGTATGACTATTTGTTCAAGATTGTTTCGATTGGGGATTCCGGCGTTGGGAAGTCCAACATTCTTTCGAGATTTACTAGAA
ACGAGTTCTACTTGGAGTCCAAATCCACCATTGATCTTTTGGGTTAG
mRNA sequenceShow/hide mRNA sequence
ATGATTTGTTCTTATAGAAATGAAACAAATTTTTGCTCTTATGGCAAAGTAAACAGAGAAGTTCAACTGCACTGCCCACCAAGAGGTTTGTTCAAGAAATCTAGGGTAGA
GACTACTATGGCTCATAAGGTAGACCACGAGTATGACTATTTGTTCAAGATTGTTTCGATTGGGGATTCCGGCGTTGGGAAGTCCAACATTCTTTCGAGATTTACTAGAA
ACGAGTTCTACTTGGAGTCCAAATCCACCATTGATCTTTTGGGTTAG
Protein sequenceShow/hide protein sequence
MICSYRNETNFCSYGKVNREVQLHCPPRGLFKKSRVETTMAHKVDHEYDYLFKIVSIGDSGVGKSNILSRFTRNEFYLESKSTIDLLG