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IVF0019025 (gene) of Melon (IVF77) v1 genome

Gene IDIVF0019025
OrganismCucumis melo ssp. agrestis cv. IVF77 (Melon (IVF77) v1)
DescriptionRetrotransposon protein
Genome locationchr01:15754295..15754719
RNA-Seq ExpressionIVF0019025
SyntenyIVF0019025
Gene Ontology termsGO:0016021 - integral component of membrane (cellular component)
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0062588.1 retrotransposon protein [Cucumis melo var. makuwa]8.40e-6587.04Show/hide
Query:  MRGPAYSGFGWNDEEKCIIAEKELFDNWVRSYPVAKGVLNKPFPYYDELTYVFGRDRATGRFAETFADVGSNELGSEYDRFYMGDGNEEFPSVYSQGIDL
        MRGPA SGFGWNDEEKCI+AEKELFDNWVRS+P  KG+LNKPFPYYDELTYVFGRDRATGRFAETFADVGSNE G  YDRF MGDGNE+FPSVYSQG+D+
Subjt:  MRGPAYSGFGWNDEEKCIIAEKELFDNWVRSYPVAKGVLNKPFPYYDELTYVFGRDRATGRFAETFADVGSNELGSEYDRFYMGDGNEEFPSVYSQGIDL

Query:  SQNDVRAS
        SQ+DVRAS
Subjt:  SQNDVRAS

KAA0064810.1 retrotransposon protein [Cucumis melo var. makuwa]1.04e-6487.04Show/hide
Query:  MRGPAYSGFGWNDEEKCIIAEKELFDNWVRSYPVAKGVLNKPFPYYDELTYVFGRDRATGRFAETFADVGSNELGSEYDRFYMGDGNEEFPSVYSQGIDL
        MRGPA SGFGWNDEEKCI+AEKELFDNWVRS+P AKG+LNKPFPYYDELTYVFGRDRATGRFAETFADVGSNE G  YDRF MGDGNE+FPSVY+QG+D+
Subjt:  MRGPAYSGFGWNDEEKCIIAEKELFDNWVRSYPVAKGVLNKPFPYYDELTYVFGRDRATGRFAETFADVGSNELGSEYDRFYMGDGNEEFPSVYSQGIDL

Query:  SQNDVRAS
        SQ+DVRAS
Subjt:  SQNDVRAS

KAA0065477.1 retrotransposon protein [Cucumis melo var. makuwa]1.04e-6486.11Show/hide
Query:  MRGPAYSGFGWNDEEKCIIAEKELFDNWVRSYPVAKGVLNKPFPYYDELTYVFGRDRATGRFAETFADVGSNELGSEYDRFYMGDGNEEFPSVYSQGIDL
        MRGPA SGFGWNDEEKCI+AEKELFDNWVRS+P AKG+LNKPFPYYDELTYVFGRDRATGRFAETFADVGSNE G  YDRF MGDGNE+F  VYSQG+D+
Subjt:  MRGPAYSGFGWNDEEKCIIAEKELFDNWVRSYPVAKGVLNKPFPYYDELTYVFGRDRATGRFAETFADVGSNELGSEYDRFYMGDGNEEFPSVYSQGIDL

Query:  SQNDVRAS
        SQ+DVRAS
Subjt:  SQNDVRAS

TYK06175.1 retrotransposon protein [Cucumis melo var. makuwa]1.54e-6488.89Show/hide
Query:  MRGPAYSGFGWNDEEKCIIAEKELFDNWVRSYPVAKGVLNKPFPYYDELTYVFGRDRATGRFAETFADVGSNELGSEYDRFYMGDGNEEFPSVYSQGIDL
        MRGPAYSGFGWNDEEKCIIAEKELFDNWVRS+P AKG+LNKPF YYDELTYVFGRDRATGRFAETFADV SNE G  YDRF MGDGNE+FP VYSQGIDL
Subjt:  MRGPAYSGFGWNDEEKCIIAEKELFDNWVRSYPVAKGVLNKPFPYYDELTYVFGRDRATGRFAETFADVGSNELGSEYDRFYMGDGNEEFPSVYSQGIDL

Query:  SQNDVRAS
        SQ+DVRAS
Subjt:  SQNDVRAS

TYK10915.1 retrotransposon protein [Cucumis melo var. makuwa]5.41e-6587.04Show/hide
Query:  MRGPAYSGFGWNDEEKCIIAEKELFDNWVRSYPVAKGVLNKPFPYYDELTYVFGRDRATGRFAETFADVGSNELGSEYDRFYMGDGNEEFPSVYSQGIDL
        MRGPA SGFGWNDEEKCI+AEKELFDNWVRS+P AKG+LNKPFPYYDELTYVFGRDRATGRFAETFADVGSNE G  YDRF MGDGNE+FP VYSQG+D+
Subjt:  MRGPAYSGFGWNDEEKCIIAEKELFDNWVRSYPVAKGVLNKPFPYYDELTYVFGRDRATGRFAETFADVGSNELGSEYDRFYMGDGNEEFPSVYSQGIDL

Query:  SQNDVRAS
        SQ+DVRAS
Subjt:  SQNDVRAS

TrEMBL top hitse value%identityAlignment
A0A5A7TRV1 Retrotransposon protein3.4e-5087.04Show/hide
Query:  MRGPAYSGFGWNDEEKCIIAEKELFDNWVRSYPVAKGVLNKPFPYYDELTYVFGRDRATGRFAETFADVGSNELGSEYDRFYMGDGNEEFPSVYSQGIDL
        MRGPA SGFGWNDEEKCI+AEKELFDNWVRS+P AKG+LNKPFPYYDELTYVFGRDRATGRFAETFADVGSNE G  YDRF MGDGNE+FP VYSQG+D+
Subjt:  MRGPAYSGFGWNDEEKCIIAEKELFDNWVRSYPVAKGVLNKPFPYYDELTYVFGRDRATGRFAETFADVGSNELGSEYDRFYMGDGNEEFPSVYSQGIDL

Query:  SQNDVRAS
        SQ+DVRAS
Subjt:  SQNDVRAS

A0A5A7V4T0 Retrotransposon protein2.6e-5087.04Show/hide
Query:  MRGPAYSGFGWNDEEKCIIAEKELFDNWVRSYPVAKGVLNKPFPYYDELTYVFGRDRATGRFAETFADVGSNELGSEYDRFYMGDGNEEFPSVYSQGIDL
        MRGPA SGFGWNDEEKCI+AEKELFDNWVRS+P  KG+LNKPFPYYDELTYVFGRDRATGRFAETFADVGSNE G  YDRF MGDGNE+FPSVYSQG+D+
Subjt:  MRGPAYSGFGWNDEEKCIIAEKELFDNWVRSYPVAKGVLNKPFPYYDELTYVFGRDRATGRFAETFADVGSNELGSEYDRFYMGDGNEEFPSVYSQGIDL

Query:  SQNDVRAS
        SQ+DVRAS
Subjt:  SQNDVRAS

A0A5A7VCA3 Retrotransposon protein2.0e-5087.04Show/hide
Query:  MRGPAYSGFGWNDEEKCIIAEKELFDNWVRSYPVAKGVLNKPFPYYDELTYVFGRDRATGRFAETFADVGSNELGSEYDRFYMGDGNEEFPSVYSQGIDL
        MRGPA SGFGWNDEEKCI+AEKELFDNWVRS+P AKG+LNKPFPYYDELTYVFGRDRATGRFAETFADVGSNE G  YDRF MGDGNE+FPSVY+QG+D+
Subjt:  MRGPAYSGFGWNDEEKCIIAEKELFDNWVRSYPVAKGVLNKPFPYYDELTYVFGRDRATGRFAETFADVGSNELGSEYDRFYMGDGNEEFPSVYSQGIDL

Query:  SQNDVRAS
        SQ+DVRAS
Subjt:  SQNDVRAS

A0A5A7VES2 Retrotransposon protein2.6e-5087.96Show/hide
Query:  MRGPAYSGFGWNDEEKCIIAEKELFDNWVRSYPVAKGVLNKPFPYYDELTYVFGRDRATGRFAETFADVGSNELGSEYDRFYMGDGNEEFPSVYSQGIDL
        MRGPA SGFGWNDEEKCIIAEKELFDNWVRS+P AKG+LNKPFPYYDELTYVFGRDRATGRFAETFADVGSNE G  YDRF MGDGNE+FP VYSQG+D+
Subjt:  MRGPAYSGFGWNDEEKCIIAEKELFDNWVRSYPVAKGVLNKPFPYYDELTYVFGRDRATGRFAETFADVGSNELGSEYDRFYMGDGNEEFPSVYSQGIDL

Query:  SQNDVRAS
        SQ+DVRAS
Subjt:  SQNDVRAS

A0A5D3CWL2 Retrotransposon protein3.4e-5087.04Show/hide
Query:  MRGPAYSGFGWNDEEKCIIAEKELFDNWVRSYPVAKGVLNKPFPYYDELTYVFGRDRATGRFAETFADVGSNELGSEYDRFYMGDGNEEFPSVYSQGIDL
        MRGPA SGFGWNDEEKCI+AEKELFDNWVRS+P AKG+LNKPFPYYDELTYVFGRDRATGRFAETFADVGSNE G  YDRF MGDGNE+FP VYSQG+D+
Subjt:  MRGPAYSGFGWNDEEKCIIAEKELFDNWVRSYPVAKGVLNKPFPYYDELTYVFGRDRATGRFAETFADVGSNELGSEYDRFYMGDGNEEFPSVYSQGIDL

Query:  SQNDVRAS
        SQ+DVRAS
Subjt:  SQNDVRAS

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
AT2G24960.1 unknown protein3.6e-0428.05Show/hide
Query:  GFGWNDEEKCIIAEKELFDNWVRSYPVAKGVLNKPFPYYDELTYVF------GRD-RATGRFAETFADVGSNELGSEYDRFY
        GF W++    I A+  ++D++++ +P+A+    K  P Y++L  +F      G D R  G  A+T     S E  S+  R +
Subjt:  GFGWNDEEKCIIAEKELFDNWVRSYPVAKGVLNKPFPYYDELTYVF------GRD-RATGRFAETFADVGSNELGSEYDRFY

AT2G24960.2 unknown protein6.6e-0626.79Show/hide
Query:  SGFGWNDEEKCIIAEKELFDNWVRSYPVAKGVLNKPFPYYDELTYVFGRDRATGRF
        +GF W+     +IA+ ++++ +++++P A+    K  P Y  L ++FG++ + GR+
Subjt:  SGFGWNDEEKCIIAEKELFDNWVRSYPVAKGVLNKPFPYYDELTYVFGRDRATGRF

AT4G02210.1 unknown protein8.1e-0425.53Show/hide
Query:  GFGWNDEEKCIIAEKELFDNWVRSYPVAKGVLNKPFPYYDELTYVFG
        GF W++E + + A+  ++ ++++++  A+  + +P PYY +L  + G
Subjt:  GFGWNDEEKCIIAEKELFDNWVRSYPVAKGVLNKPFPYYDELTYVFG

AT4G02210.2 unknown protein8.1e-0425.53Show/hide
Query:  GFGWNDEEKCIIAEKELFDNWVRSYPVAKGVLNKPFPYYDELTYVFG
        GF W++E + + A+  ++ ++++++  A+  + +P PYY +L  + G
Subjt:  GFGWNDEEKCIIAEKELFDNWVRSYPVAKGVLNKPFPYYDELTYVFG

AT5G27260.1 unknown protein1.5e-0533.87Show/hide
Query:  SGFGWNDEEKCIIAEKELFDNWVRSYPVAKGVLNKPFPYYDELTYVFGRDRATGRFAETFAD
        SGFGW+   K   A  E++ ++++++P  K +    F ++DEL  +FG   ATG+ A    D
Subjt:  SGFGWNDEEKCIIAEKELFDNWVRSYPVAKGVLNKPFPYYDELTYVFGRDRATGRFAETFAD


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGCGGGGGCCAGCGTACAGTGGCTTTGGGTGGAACGATGAAGAGAAATGTATCATTGCGGAGAAAGAATTATTTGATAATTGGGTTAGATCGTATCCTGTAGCGAAGGG
AGTCCTGAACAAACCATTCCCGTATTACGACGAACTTACATATGTCTTCGGTCGCGATAGGGCGACGGGTCGGTTTGCTGAGACATTCGCCGACGTCGGGTCTAACGAGC
TTGGTAGCGAATATGACAGATTTTATATGGGGGATGGAAACGAGGAGTTCCCGTCCGTGTACAGCCAGGGGATTGACCTCTCGCAGAACGATGTACGTGCATCCTGA
mRNA sequenceShow/hide mRNA sequence
ATGCGGGGGCCAGCGTACAGTGGCTTTGGGTGGAACGATGAAGAGAAATGTATCATTGCGGAGAAAGAATTATTTGATAATTGGGTTAGATCGTATCCTGTAGCGAAGGG
AGTCCTGAACAAACCATTCCCGTATTACGACGAACTTACATATGTCTTCGGTCGCGATAGGGCGACGGGTCGGTTTGCTGAGACATTCGCCGACGTCGGGTCTAACGAGC
TTGGTAGCGAATATGACAGATTTTATATGGGGGATGGAAACGAGGAGTTCCCGTCCGTGTACAGCCAGGGGATTGACCTCTCGCAGAACGATGTACGTGCATCCTGA
Protein sequenceShow/hide protein sequence
MRGPAYSGFGWNDEEKCIIAEKELFDNWVRSYPVAKGVLNKPFPYYDELTYVFGRDRATGRFAETFADVGSNELGSEYDRFYMGDGNEEFPSVYSQGIDLSQNDVRAS