; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

IVF0019045 (gene) of Melon (IVF77) v1 genome

Gene IDIVF0019045
OrganismCucumis melo ssp. agrestis cv. IVF77 (Melon (IVF77) v1)
Descriptionnuclear transport factor 2
Genome locationchr12:22111779..22113269
RNA-Seq ExpressionIVF0019045
SyntenyIVF0019045
Gene Ontology termsGO:0006913 - nucleocytoplasmic transport (biological process)
GO:0044613 - nuclear pore central transport channel (cellular component)
InterPro domainsIPR002075 - Nuclear transport factor 2
IPR018222 - Nuclear transport factor 2, eukaryote
IPR032710 - NTF2-like domain superfamily


Homology Show/hide homology
GenBank top hitse value%identityAlignment
XP_004153658.1 nuclear transport factor 2B [Cucumis sativus]1.48e-5594.44Show/hide
Query:  MLTFEGQQILGVNDISTKLQQLPFERCRHVVSTIDTQPSSVPGSILIFVSGSIEIPEEEHPLRYSQMFHLVPSPQGNLFVQNDIFRLNYG
        MLTFEGQQILGV+DIS+KLQQLPFERCRHVVSTIDTQPSSV GSILIFVSGSIEIPEEEHPLR+SQMFHLVPSP+GNLFVQNDIFRLNYG
Subjt:  MLTFEGQQILGVNDISTKLQQLPFERCRHVVSTIDTQPSSVPGSILIFVSGSIEIPEEEHPLRYSQMFHLVPSPQGNLFVQNDIFRLNYG

XP_008441397.1 PREDICTED: nuclear transport factor 2 [Cucumis melo]2.35e-59100Show/hide
Query:  MLTFEGQQILGVNDISTKLQQLPFERCRHVVSTIDTQPSSVPGSILIFVSGSIEIPEEEHPLRYSQMFHLVPSPQGNLFVQNDIFRLNYG
        MLTFEGQQILGVNDISTKLQQLPFERCRHVVSTIDTQPSSVPGSILIFVSGSIEIPEEEHPLRYSQMFHLVPSPQGNLFVQNDIFRLNYG
Subjt:  MLTFEGQQILGVNDISTKLQQLPFERCRHVVSTIDTQPSSVPGSILIFVSGSIEIPEEEHPLRYSQMFHLVPSPQGNLFVQNDIFRLNYG

XP_023001318.1 nuclear transport factor 2B [Cucurbita maxima]2.74e-5185.56Show/hide
Query:  MLTFEGQQILGVNDISTKLQQLPFERCRHVVSTIDTQPSSVPGSILIFVSGSIEIPEEEHPLRYSQMFHLVPSPQGNLFVQNDIFRLNYG
        MLTFEGQQILGV+DIS++LQQLPFERCRHVVST+DTQPS+VPGSILIFVSGS+E+PEEEH LR+SQMFHLVP+ QGNL +QNDIFRLNYG
Subjt:  MLTFEGQQILGVNDISTKLQQLPFERCRHVVSTIDTQPSSVPGSILIFVSGSIEIPEEEHPLRYSQMFHLVPSPQGNLFVQNDIFRLNYG

XP_023519037.1 nuclear transport factor 2B [Cucurbita pepo subsp. pepo]1.93e-5186.67Show/hide
Query:  MLTFEGQQILGVNDISTKLQQLPFERCRHVVSTIDTQPSSVPGSILIFVSGSIEIPEEEHPLRYSQMFHLVPSPQGNLFVQNDIFRLNYG
        MLTFEGQQILGV+DIS++LQQLPFERCRHVVST+DTQPS+VPGSILIFVSGS+E+PEEEH LR+SQMFHLVP+ QGNL VQNDIFRLNYG
Subjt:  MLTFEGQQILGVNDISTKLQQLPFERCRHVVSTIDTQPSSVPGSILIFVSGSIEIPEEEHPLRYSQMFHLVPSPQGNLFVQNDIFRLNYG

XP_038895004.1 nuclear transport factor 2B [Benincasa hispida]3.90e-5187.78Show/hide
Query:  MLTFEGQQILGVNDISTKLQQLPFERCRHVVSTIDTQPSSVPGSILIFVSGSIEIPEEEHPLRYSQMFHLVPSPQGNLFVQNDIFRLNYG
        MLTFEGQQILGV+DIS+KLQQLPFER RH+VSTIDTQPSSV GS LIFVSGS+E+PEEEH LR+SQMFHLVPSPQGNLFVQN+IFRLNYG
Subjt:  MLTFEGQQILGVNDISTKLQQLPFERCRHVVSTIDTQPSSVPGSILIFVSGSIEIPEEEHPLRYSQMFHLVPSPQGNLFVQNDIFRLNYG

TrEMBL top hitse value%identityAlignment
A0A0A0LUU9 NTF2 domain-containing protein4.1e-4194.44Show/hide
Query:  MLTFEGQQILGVNDISTKLQQLPFERCRHVVSTIDTQPSSVPGSILIFVSGSIEIPEEEHPLRYSQMFHLVPSPQGNLFVQNDIFRLNYG
        MLTFEGQQILGV+DIS+KLQQLPFERCRHVVSTIDTQPSSV GSILIFVSGSIEIPEEEHPLR+SQMFHLVPSP+GNLFVQNDIFRLNYG
Subjt:  MLTFEGQQILGVNDISTKLQQLPFERCRHVVSTIDTQPSSVPGSILIFVSGSIEIPEEEHPLRYSQMFHLVPSPQGNLFVQNDIFRLNYG

A0A1S3B3B7 nuclear transport factor 25.2e-44100Show/hide
Query:  MLTFEGQQILGVNDISTKLQQLPFERCRHVVSTIDTQPSSVPGSILIFVSGSIEIPEEEHPLRYSQMFHLVPSPQGNLFVQNDIFRLNYG
        MLTFEGQQILGVNDISTKLQQLPFERCRHVVSTIDTQPSSVPGSILIFVSGSIEIPEEEHPLRYSQMFHLVPSPQGNLFVQNDIFRLNYG
Subjt:  MLTFEGQQILGVNDISTKLQQLPFERCRHVVSTIDTQPSSVPGSILIFVSGSIEIPEEEHPLRYSQMFHLVPSPQGNLFVQNDIFRLNYG

A0A6J1CEC9 nuclear transport factor 22.0e-3581.11Show/hide
Query:  MLTFEGQQILGVNDISTKLQQLPFERCRHVVSTIDTQPSSVPGSILIFVSGSIEIPEEEHPLRYSQMFHLVPSPQGNLFVQNDIFRLNYG
        MLTFEGQ+ILGV+DIS++LQQLPFERCRHVVST+DTQPS+  GS+LIFVSGS+E+P EEH LR+SQMFHLVP+ QG+LFVQNDIFRLNYG
Subjt:  MLTFEGQQILGVNDISTKLQQLPFERCRHVVSTIDTQPSSVPGSILIFVSGSIEIPEEEHPLRYSQMFHLVPSPQGNLFVQNDIFRLNYG

A0A6J1F427 nuclear transport factor 2B1.2e-3785.56Show/hide
Query:  MLTFEGQQILGVNDISTKLQQLPFERCRHVVSTIDTQPSSVPGSILIFVSGSIEIPEEEHPLRYSQMFHLVPSPQGNLFVQNDIFRLNYG
        MLTFEGQQILGV+DIS++LQQLPFERCRHVVST+DTQPS+VPGSILIFVSGS+E+P+EEH LR+SQMFHLVP+ QGNL VQNDIFRLNYG
Subjt:  MLTFEGQQILGVNDISTKLQQLPFERCRHVVSTIDTQPSSVPGSILIFVSGSIEIPEEEHPLRYSQMFHLVPSPQGNLFVQNDIFRLNYG

A0A6J1KQ62 nuclear transport factor 2B7.2e-3885.56Show/hide
Query:  MLTFEGQQILGVNDISTKLQQLPFERCRHVVSTIDTQPSSVPGSILIFVSGSIEIPEEEHPLRYSQMFHLVPSPQGNLFVQNDIFRLNYG
        MLTFEGQQILGV+DIS++LQQLPFERCRHVVST+DTQPS+VPGSILIFVSGS+E+PEEEH LR+SQMFHLVP+ QGNL +QNDIFRLNYG
Subjt:  MLTFEGQQILGVNDISTKLQQLPFERCRHVVSTIDTQPSSVPGSILIFVSGSIEIPEEEHPLRYSQMFHLVPSPQGNLFVQNDIFRLNYG

SwissProt top hitse value%identityAlignment
Q10100 Nuclear transport factor 21.1e-1950Show/hide
Query:  MLTFEGQQILGVNDISTKLQQLPFERCRHVVSTIDTQPSSVPGSILIFVSGSIEIPEEEHPLRYSQMFHLVPSPQGNLFVQNDIFRLNYG
        ML+FEG Q+ G   I  KL  LPF+R +H +ST+D QP+   GS+++ V+G + + EE+   RYSQ+FHLV +  GN +V ND+FRLNYG
Subjt:  MLTFEGQQILGVNDISTKLQQLPFERCRHVVSTIDTQPSSVPGSILIFVSGSIEIPEEEHPLRYSQMFHLVPSPQGNLFVQNDIFRLNYG

Q9C7F5 Nuclear transport factor 2B2.1e-2658.43Show/hide
Query:  MLTFEGQQILGVNDISTKLQQLPFERCRHVVSTIDTQPSSVPGSILIFVSGSIEIPEEEHPLRYSQMFHLVPSPQGNLFVQNDIFRLNY
        MLTFEGQ+I GV  I  KL  LPF++C+H +ST+D QPS     +L+FVSG++++  EEH L++SQMFHL+P+PQG+ +V NDIFRLNY
Subjt:  MLTFEGQQILGVNDISTKLQQLPFERCRHVVSTIDTQPSSVPGSILIFVSGSIEIPEEEHPLRYSQMFHLVPSPQGNLFVQNDIFRLNY

Q9FZK4 Nuclear transport factor 2A2.2e-2356.18Show/hide
Query:  MLTFEGQQILGVNDISTKLQQLPFERCRHVVSTIDTQPSSVPGSILIFVSGSIEIPEEEHPLRYSQMFHLVPSPQGNLFVQNDIFRLNY
        MLTFEGQ+I G  +I  KL  LPF++C+H ++T+D QPS   G +L+FVSG++++  E+H L++SQMFHL+ S QGN +V NDIFRLNY
Subjt:  MLTFEGQQILGVNDISTKLQQLPFERCRHVVSTIDTQPSSVPGSILIFVSGSIEIPEEEHPLRYSQMFHLVPSPQGNLFVQNDIFRLNY

Q9P926 Nuclear transport factor 22.9e-2052.81Show/hide
Query:  MLTFEGQQILGVNDISTKLQQLPFERCRHVVSTIDTQPSSVPGSILIFVSGSIEIPEEEHPLRYSQMFHLVPSPQGNLFVQNDIFRLNY
        MLTFE  Q+ G  DI  KL  LPF++  H +ST+D QP+S  G IL+ V+G + I EE++  RYSQ+FHL+P   G+ +V NDIFRLNY
Subjt:  MLTFEGQQILGVNDISTKLQQLPFERCRHVVSTIDTQPSSVPGSILIFVSGSIEIPEEEHPLRYSQMFHLVPSPQGNLFVQNDIFRLNY

Q9XJ54 Nuclear transport factor 22.6e-2457.78Show/hide
Query:  MLTFEGQQILGVNDISTKLQQLPFERCRHVVSTIDTQPSSVPGSILIFVSGSIEIPEEEHPLRYSQMFHLVPSPQGNLFVQNDIFRLNYG
        MLTFEGQQ LG   I+ KL  LPF +C H ++T+D QPS   G +L+FVSGS+    +EHPL++SQMF L+P+  GN +VQND+FRLNYG
Subjt:  MLTFEGQQILGVNDISTKLQQLPFERCRHVVSTIDTQPSSVPGSILIFVSGSIEIPEEEHPLRYSQMFHLVPSPQGNLFVQNDIFRLNYG

Arabidopsis top hitse value%identityAlignment
AT1G11570.1 NTF2-like8.7e-2058.9Show/hide
Query:  MLTFEGQQILGVNDISTKLQQLPFERCRHVVSTIDTQPSSVP---GSILIFVSGSIEIPEEEHPLRYSQMFHL
        +LTFEGQ I GV++IS KL+QLPF++C H++ST+D+QPSS+    G IL+FVSGSI++  E+HPLR+SQ++ L
Subjt:  MLTFEGQQILGVNDISTKLQQLPFERCRHVVSTIDTQPSSVP---GSILIFVSGSIEIPEEEHPLRYSQMFHL

AT1G11570.2 NTF2-like3.2e-3062.37Show/hide
Query:  MLTFEGQQILGVNDISTKLQQLPFERCRHVVSTIDTQPSSVP---GSILIFVSGSIEIPEEEHPLRYSQMFHLVPSPQGNLFVQNDIFRLNYG
        +LTFEGQ I GV++IS KL+QLPF++C H++ST+D+QPSS+    G IL+FVSGSI++  E+HPLR+SQ FHL+P  QG+ FVQN++FRLNYG
Subjt:  MLTFEGQQILGVNDISTKLQQLPFERCRHVVSTIDTQPSSVP---GSILIFVSGSIEIPEEEHPLRYSQMFHLVPSPQGNLFVQNDIFRLNYG

AT1G27310.1 nuclear transport factor 2A1.5e-2456.18Show/hide
Query:  MLTFEGQQILGVNDISTKLQQLPFERCRHVVSTIDTQPSSVPGSILIFVSGSIEIPEEEHPLRYSQMFHLVPSPQGNLFVQNDIFRLNY
        MLTFEGQ+I G  +I  KL  LPF++C+H ++T+D QPS   G +L+FVSG++++  E+H L++SQMFHL+ S QGN +V NDIFRLNY
Subjt:  MLTFEGQQILGVNDISTKLQQLPFERCRHVVSTIDTQPSSVPGSILIFVSGSIEIPEEEHPLRYSQMFHLVPSPQGNLFVQNDIFRLNY

AT1G27970.1 nuclear transport factor 2B1.5e-2758.43Show/hide
Query:  MLTFEGQQILGVNDISTKLQQLPFERCRHVVSTIDTQPSSVPGSILIFVSGSIEIPEEEHPLRYSQMFHLVPSPQGNLFVQNDIFRLNY
        MLTFEGQ+I GV  I  KL  LPF++C+H +ST+D QPS     +L+FVSG++++  EEH L++SQMFHL+P+PQG+ +V NDIFRLNY
Subjt:  MLTFEGQQILGVNDISTKLQQLPFERCRHVVSTIDTQPSSVPGSILIFVSGSIEIPEEEHPLRYSQMFHLVPSPQGNLFVQNDIFRLNY

AT1G27970.2 nuclear transport factor 2B5.3e-2556.47Show/hide
Query:  MLTFEGQQILGVNDISTKLQQLPFERCRHVVSTIDTQPSSVPGSILIFVSGSIEIPEEEHPLRYSQMFHLVPSPQGNLFVQNDIF
        MLTFEGQ+I GV  I  KL  LPF++C+H +ST+D QPS     +L+FVSG++++  EEH L++SQMFHL+P+PQG+ +V NDIF
Subjt:  MLTFEGQQILGVNDISTKLQQLPFERCRHVVSTIDTQPSSVPGSILIFVSGSIEIPEEEHPLRYSQMFHLVPSPQGNLFVQNDIF


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGCTCACCTTTGAAGGCCAACAAATTTTAGGTGTCAATGATATCTCCACAAAGCTTCAGCAATTGCCATTTGAACGTTGTCGACATGTCGTTAGCACCATAGACACGCA
GCCCTCCTCCGTCCCTGGCTCCATCCTCATCTTCGTCAGCGGTAGCATTGAGATACCCGAAGAAGAACACCCACTCAGATACAGCCAGATGTTTCACTTGGTACCATCAC
CACAAGGCAACCTTTTCGTTCAGAATGACATTTTTCGCCTCAATTATGGTTAA
mRNA sequenceShow/hide mRNA sequence
ACAGCAATTTCATTATTCTCTATTTTGCTCACTCACTCAAATGACTTCCTTTACACTTCTTCTTTTTCACTAGTACTCAACCATATGCCCCCACCGCCATATCAGTAATT
ACAAATCTCTTCCTACATGCACTTGAATGGAATAAAACCAACGTTATATTATATAAGAGAAGAAAAGGATTTATATTGTTGGTTTTTGGAGAGAATAAGAGAGATGGAAG
AAGAACAGGGTGATATAATTGGGAAGGCTTTTGTGGAACATTATTACCATTTGTTTGATAATGAAGAGCTTCTCTTTCATCTTTGTATCAACCTGATTCAATGCTCACCT
TTGAAGGCCAACAAATTTTAGGTGTCAATGATATCTCCACAAAGCTTCAGCAATTGCCATTTGAACGTTGTCGACATGTCGTTAGCACCATAGACACGCAGCCCTCCTCC
GTCCCTGGCTCCATCCTCATCTTCGTCAGCGGTAGCATTGAGATACCCGAAGAAGAACACCCACTCAGATACAGCCAGATGTTTCACTTGGTACCATCACCACAAGGCAA
CCTTTTCGTTCAGAATGACATTTTTCGCCTCAATTATGGTTAAGTTCGTTCCTGGTTTCCTTTTCTCTTTGTATTTGAACACACAAATGTTGTAATTTCAAAGATTTTTA
TTTCTATTTTGGCTTCTTATTTAAATATACATCATTTCTAGTTTCTTTTTTCTTTTTTTTTTTTTTT
Protein sequenceShow/hide protein sequence
MLTFEGQQILGVNDISTKLQQLPFERCRHVVSTIDTQPSSVPGSILIFVSGSIEIPEEEHPLRYSQMFHLVPSPQGNLFVQNDIFRLNYG