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IVF0019065 (gene) of Melon (IVF77) v1 genome

Gene IDIVF0019065
OrganismCucumis melo ssp. agrestis cv. IVF77 (Melon (IVF77) v1)
DescriptionTy3-gypsy retrotransposon protein
Genome locationchr11:5809599..5809965
RNA-Seq ExpressionIVF0019065
SyntenyIVF0019065
Gene Ontology termsGO:0090481 - pyrimidine nucleotide-sugar transmembrane transport (biological process)
GO:0000139 - Golgi membrane (cellular component)
GO:0016021 - integral component of membrane (cellular component)
GO:0015165 - pyrimidine nucleotide-sugar transmembrane transporter activity (molecular function)
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0037133.1 retrotransposon protein [Cucumis melo var. makuwa]3.89e-1579.59Show/hide
Query:  AMLWVSSPWVSVAKKKGRGDEKNEVKVGVFVMRRSSLVRGWILKKERGV
        A +WVSSPWVS  +KKGRGDEKN VKVGVF+MRRS  VRG ILKKERGV
Subjt:  AMLWVSSPWVSVAKKKGRGDEKNEVKVGVFVMRRSSLVRGWILKKERGV

KAA0044825.1 transcription factor bHLH36-like [Cucumis melo var. makuwa]2.67e-2865.98Show/hide
Query:  MDKGVVELGRERERQRRQEIGKEINGERRNEKIKIKNSQAMLWVSSPWVSVAKKKGRGDEKNEVKVGVFVMRRSSLVRGWILKKERGVWVKKEREGF
        MDKGVVELGRERERQRRQEI                + + +L +    VSVAKKKGRGDEKN VKVGVFVM RSS VRG +LKK+RGVWVKKEREGF
Subjt:  MDKGVVELGRERERQRRQEIGKEINGERRNEKIKIKNSQAMLWVSSPWVSVAKKKGRGDEKNEVKVGVFVMRRSSLVRGWILKKERGVWVKKEREGF

KAA0048509.1 CMP-sialic acid transporter 4 isoform X2 [Cucumis melo var. makuwa]2.34e-2777.33Show/hide
Query:  MDKGVVELGRERERQRRQEIGKEINGERRNEKIKIKNSQAMLWVSSPWVSVAKKKGRGDEKNEVKVGVFVMRRSS
        MDK VVELGRER+RQR+QEIG+ ING RRNEK KIKNS   +WVSSPWVSVA+KKGRGDEKN VKV VFV+  SS
Subjt:  MDKGVVELGRERERQRRQEIGKEINGERRNEKIKIKNSQAMLWVSSPWVSVAKKKGRGDEKNEVKVGVFVMRRSS

KAA0054034.1 ty3-gypsy retrotransposon protein [Cucumis melo var. makuwa]2.03e-1682Show/hide
Query:  MLWVSSPWVSVAKKKGRGDEKNEVKVGVFVMRRSSLVRGWILKKERGVWV
        MLWVSSPWVSV KKKGRGDEKN  KVGVFVMRRSS VR  ILKKE GV +
Subjt:  MLWVSSPWVSVAKKKGRGDEKNEVKVGVFVMRRSSLVRGWILKKERGVWV

TYJ96889.1 ty3-gypsy retrotransposon protein [Cucumis melo var. makuwa]5.93e-1981.48Show/hide
Query:  MLWVSSPWVSVAKKKGRGDEKNEVKVGVFVMRRSSLVRGWILKKERGVWVKKER
        MLWVSSPWVSV KKKGRGDEKN  KVGVFVMRRSS VR  ILKKE GVW  KE+
Subjt:  MLWVSSPWVSVAKKKGRGDEKNEVKVGVFVMRRSSLVRGWILKKERGVWVKKER

TrEMBL top hitse value%identityAlignment
A0A5A7T2E4 Retrotransposon protein1.5e-1279.59Show/hide
Query:  AMLWVSSPWVSVAKKKGRGDEKNEVKVGVFVMRRSSLVRGWILKKERGV
        A +WVSSPWVS  +KKGRGDEKN VKVGVF+MRRS  VRG ILKKERGV
Subjt:  AMLWVSSPWVSVAKKKGRGDEKNEVKVGVFVMRRSSLVRGWILKKERGV

A0A5A7TTV0 Transcription factor bHLH36-like5.1e-2165.98Show/hide
Query:  MDKGVVELGRERERQRRQEIGKEINGERRNEKIKIKNSQAMLWVSSPWVSVAKKKGRGDEKNEVKVGVFVMRRSSLVRGWILKKERGVWVKKEREGF
        MDKGVVELGRERERQRRQEI                + + +L +    VSVAKKKGRGDEKN VKVGVFVM RSS VRG +LKK+RGVWVKKEREGF
Subjt:  MDKGVVELGRERERQRRQEIGKEINGERRNEKIKIKNSQAMLWVSSPWVSVAKKKGRGDEKNEVKVGVFVMRRSSLVRGWILKKERGVWVKKEREGF

A0A5A7U4Z1 CMP-sialic acid transporter 4 isoform X21.1e-2077.33Show/hide
Query:  MDKGVVELGRERERQRRQEIGKEINGERRNEKIKIKNSQAMLWVSSPWVSVAKKKGRGDEKNEVKVGVFVMRRSS
        MDK VVELGRER+RQR+QEIG+ ING RRNEK KIKNS   +WVSSPWVSVA+KKGRGDEKN VKV VFV+  SS
Subjt:  MDKGVVELGRERERQRRQEIGKEINGERRNEKIKIKNSQAMLWVSSPWVSVAKKKGRGDEKNEVKVGVFVMRRSS

A0A5A7UFR0 Ty3-gypsy retrotransposon protein6.6e-1380.39Show/hide
Query:  MLWVSSPWVSVAKKKGRGDEKNEVKVGVFVMRRSSLVRGWILKKERGVWVK
        MLWVSSPWVSV KKKGRGDEKN  KVGVFVMRRSS VR  ILKKE GV ++
Subjt:  MLWVSSPWVSVAKKKGRGDEKNEVKVGVFVMRRSSLVRGWILKKERGVWVK

A0A5D3BCV7 Ty3-gypsy retrotransposon protein7.1e-1581.48Show/hide
Query:  MLWVSSPWVSVAKKKGRGDEKNEVKVGVFVMRRSSLVRGWILKKERGVWVKKER
        MLWVSSPWVSV KKKGRGDEKN  KVGVFVMRRSS VR  ILKKE GVW  KE+
Subjt:  MLWVSSPWVSVAKKKGRGDEKNEVKVGVFVMRRSSLVRGWILKKERGVWVKKER

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGACAAAGGCGTTGTTGAGTTAGGGAGAGAAAGGGAGAGACAAAGAAGACAAGAAATTGGGAAAGAGATAAATGGAGAGAGAAGAAACGAAAAAATAAAGATCAAGAA
CTCACAAGCAATGCTATGGGTCTCCTCGCCGTGGGTCTCTGTCGCTAAAAAGAAAGGACGTGGAGATGAGAAGAATGAGGTTAAGGTTGGGGTTTTCGTCATGCGTCGCT
CGTCGTTAGTAAGGGGATGGATTTTGAAGAAGGAAAGAGGAGTGTGGGTGAAGAAGGAAAGGGAGGGATTTTGA
mRNA sequenceShow/hide mRNA sequence
ATGGACAAAGGCGTTGTTGAGTTAGGGAGAGAAAGGGAGAGACAAAGAAGACAAGAAATTGGGAAAGAGATAAATGGAGAGAGAAGAAACGAAAAAATAAAGATCAAGAA
CTCACAAGCAATGCTATGGGTCTCCTCGCCGTGGGTCTCTGTCGCTAAAAAGAAAGGACGTGGAGATGAGAAGAATGAGGTTAAGGTTGGGGTTTTCGTCATGCGTCGCT
CGTCGTTAGTAAGGGGATGGATTTTGAAGAAGGAAAGAGGAGTGTGGGTGAAGAAGGAAAGGGAGGGATTTTGA
Protein sequenceShow/hide protein sequence
MDKGVVELGRERERQRRQEIGKEINGERRNEKIKIKNSQAMLWVSSPWVSVAKKKGRGDEKNEVKVGVFVMRRSSLVRGWILKKERGVWVKKEREGF