; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

IVF0019066 (gene) of Melon (IVF77) v1 genome

Gene IDIVF0019066
OrganismCucumis melo ssp. agrestis cv. IVF77 (Melon (IVF77) v1)
DescriptionGag-pol polyprotein
Genome locationchr08:23533571..23538844
RNA-Seq ExpressionIVF0019066
SyntenyIVF0019066
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0053331.1 gag-pol polyprotein [Cucumis melo var. makuwa]1.37e-20370.6Show/hide
Query:  MEIIRKGPLAFCPPVLDGKNFSYWKPRLIFFIKILDRKAWRALVSGYEHSMITVDGVSVPKPEVDWTDAEEQASIG-----NGRAINAIFNGTSKVKISR
        MEIIRK P    P VLDGKN+SYWKPR+IFFIK L+ KAWRA V+GYE  MIT+DGVSV KPEVDW DA+ +  +G       R +   + GTSKVKISR
Subjt:  MEIIRKGPLAFCPPVLDGKNFSYWKPRLIFFIKILDRKAWRALVSGYEHSMITVDGVSVPKPEVDWTDAEEQASIG-----NGRAINAIFNGTSKVKISR

Query:  LQLITLKFEALKMSEDEWVSEYNERVLEIANESLLLGEKIPDSKIMRKVLRSLSRKFDMKVTAIEEAHGITTLKLDELFGSLLTFEMTISDRENKKGKGI
        LQLIT KFEALKMSEDE V EYNERVLEIANESLLLGEKIPDSKI+RKVL+SL RKFD KVTAIE+AH ITTLKLDELFGSLLTFEM ISDRENKKGK I
Subjt:  LQLITLKFEALKMSEDEWVSEYNERVLEIANESLLLGEKIPDSKIMRKVLRSLSRKFDMKVTAIEEAHGITTLKLDELFGSLLTFEMTISDRENKKGKGI

Query:  TFKSTYEEEATVNHSDNEANMDESIALLTK------------------------YRRS-------------------FGSKK----KFRTIKGEDTDDAK
         FKSTYEEEA VNHSDNE NMDESIALLTK                        YR+                    +G K     +F +    DTDDA+
Subjt:  TFKSTYEEEATVNHSDNEANMDESIALLTK------------------------YRRS-------------------FGSKK----KFRTIKGEDTDDAK

Query:  DDSSMNAFTTCFTEIDLEDDSECSKEDGNEELTIEELKMLRKEDTEARAIQKERIQDLMKENERLMSIISSLKLKLKEVQNDYDQTIKSVKMLNSGTENL
        DDSSMNAFTTCFTEIDLE+DSEC+ ED +EELTIEELKMLRKEDT+AR IQKERIQDLM+ENE+LMS+ISSLKLKLKEVQNDYDQTIK VKMLNS TENL
Subjt:  DDSSMNAFTTCFTEIDLEDDSECSKEDGNEELTIEELKMLRKEDTEARAIQKERIQDLMKENERLMSIISSLKLKLKEVQNDYDQTIKSVKMLNSGTENL

Query:  DSILKSGQNSSHRYGLGFDASTSSLKSTFGVKFVPALRKAESKTTLTTTVGSPPAKSSERICYYCG
        DSIL SGQ+SSHRYGLGFDAS SS KST GVKFVPALRK +S+T LTTTV  P AK SERICYYCG
Subjt:  DSILKSGQNSSHRYGLGFDASTSSLKSTFGVKFVPALRKAESKTTLTTTVGSPPAKSSERICYYCG

KAA0058251.1 gag-proteinase polyprotein [Cucumis melo var. makuwa]3.66e-18458.63Show/hide
Query:  MEIIRKGPLAFCPPVLDGKNFSYWKPRLIFFIKILDRKAWRALVSGYEHSMITVDGVSVPKPEVDWTDAEEQASIGNGRAINAIFNGTSKVKISRLQLIT
        MEIIR+ P   CPPVLD K +SYWKP                           +DGVSVPKPEVDWT+AEEQASI N R INAIFN              
Subjt:  MEIIRKGPLAFCPPVLDGKNFSYWKPRLIFFIKILDRKAWRALVSGYEHSMITVDGVSVPKPEVDWTDAEEQASIGNGRAINAIFNGTSKVKISRLQLIT

Query:  LKFEALKMSEDEWVSEYNERVLEIANESLLLGEKIPDSKIMRKVLRSLSRKFDMKVTAIEEAHGITTLKLDELFGSLLTFEMTISDRENKKGKGITFKST
                                        EKIPDSKI+RKVLRSL RKFD+KVTAIEEAH ITTLKLDELF SLLTFEM ISDRENKKGKGI FKST
Subjt:  LKFEALKMSEDEWVSEYNERVLEIANESLLLGEKIPDSKIMRKVLRSLSRKFDMKVTAIEEAHGITTLKLDELFGSLLTFEMTISDRENKKGKGITFKST

Query:  YEEEATVNHSDNEANMDESIALLT--KY-----RRS--FGSKK-------KFRTIKG-------------------------EDTDDAKDDSSMNAFTTC
        YEEEATVNHSDNEANMDE  A  T  +Y     RRS  +G KK       K R   G                         EDT+D +DDSSMN FTT 
Subjt:  YEEEATVNHSDNEANMDESIALLT--KY-----RRS--FGSKK-------KFRTIKG-------------------------EDTDDAKDDSSMNAFTTC

Query:  FTEIDLEDDSECSKEDGNEELTIEELKMLRKEDTEARAIQKERIQDLMKENERLMSIISSLKLKLKEVQNDYDQTIKSVKMLNSGTENLDSILKSGQNSS
         TEIDL DD+ CS EDG+E++T+EEL+++RKED EARAIQKERIQ+LM+E+E LMS+ISSLKLKLKEVQNDY+QTIK VKMLNSGTENLD ILKSGQNSS
Subjt:  FTEIDLEDDSECSKEDGNEELTIEELKMLRKEDTEARAIQKERIQDLMKENERLMSIISSLKLKLKEVQNDYDQTIKSVKMLNSGTENLDSILKSGQNSS

Query:  HRYGLGFDASTSSLKSTFGVKFVPALRKAESKTTLTTTVGSPPAKSSERICYYCGRRVMEMINVMVNDFESTAIRTYDEDDETLNILEKSSTLPVEVPKV
         +  LGFD   SS KST  VKFV AL K E++TTLTTTV SPP KS  RICY+C                  A +TYDEDDETLNI   SST   +V K 
Subjt:  HRYGLGFDASTSSLKSTFGVKFVPALRKAESKTTLTTTVGSPPAKSSERICYYCGRRVMEMINVMVNDFESTAIRTYDEDDETLNILEKSSTLPVEVPKV

Query:  DDQADSTNINSKIISKEVIADNFELVPSAHVRKNHPSSSIIGDPSAEIITRKRENVDYSKMIVDLCYT
        D QA  T+INS   SKEVIADN ELVPSAHVRKNHP SSIIGDPSA I TRK+E V YSKMI DLCYT
Subjt:  DDQADSTNINSKIISKEVIADNFELVPSAHVRKNHPSSSIIGDPSAEIITRKRENVDYSKMIVDLCYT

KAA0060128.1 putative mitochondrial protein [Cucumis melo var. makuwa]3.38e-20299.35Show/hide
Query:  TIKGEDTDDAKDDSSMNAFTTCFTEIDLEDDSECSKEDGNEELTIEELKMLRKEDTEARAIQKERIQDLMKENERLMSIISSLKLKLKEVQNDYDQTIKS
        T+ GEDTDDAKDDSSMNAFTTCFTEIDLEDDSECSKEDGNEELTIEELKMLRKEDTEARAIQKERIQDLMKENERLMSIISSLKLKLKEVQNDYDQTIKS
Subjt:  TIKGEDTDDAKDDSSMNAFTTCFTEIDLEDDSECSKEDGNEELTIEELKMLRKEDTEARAIQKERIQDLMKENERLMSIISSLKLKLKEVQNDYDQTIKS

Query:  VKMLNSGTENLDSILKSGQNSSHRYGLGFDASTSSLKSTFGVKFVPALRKAESKTTLTTTVGSPPAKSSERICYYCGRRVMEMINVMVNDFESTAIRTYD
        VKMLNSGTENLDSILKSGQNSSHRYGLGFDASTSSLKSTFGVKFVPALRKAESKTTLTTTVGSPPAKSSERICYYCGRRVMEMINVMVNDFESTAIRTYD
Subjt:  VKMLNSGTENLDSILKSGQNSSHRYGLGFDASTSSLKSTFGVKFVPALRKAESKTTLTTTVGSPPAKSSERICYYCGRRVMEMINVMVNDFESTAIRTYD

Query:  EDDETLNILEKSSTLPVEVPKVDDQADSTNINSKIISKEVIADNFELVPSAHVRKNHPSSSIIGDPSAEIITRKRENVDYSKMIVDLCYTSAIESSTIDV
        EDDETLNILEKSSTLPVEVPKVDDQADSTNINSKIISKEVIADNFELVPSAHVRKNHPSSSIIGDPSAEIITRKRENVDYSKMIVDLCYTSAIESSTIDV
Subjt:  EDDETLNILEKSSTLPVEVPKVDDQADSTNINSKIISKEVIADNFELVPSAHVRKNHPSSSIIGDPSAEIITRKRENVDYSKMIVDLCYTSAIESSTIDV

Query:  ALKDEY
        ALKDEY
Subjt:  ALKDEY

KAA0066255.1 gag-pol polyprotein [Cucumis melo var. makuwa]1.16e-17649.46Show/hide
Query:  MEIIRKGPLAFCPPVLDGKNFSYWKPRLIFFIKILDRKAWRALVSGYEHSMITVDGVSVPKPEVDWTDAEEQASIGNGRAINAIFNGTSKVKISRLQLIT
        MEIIR+GP A CPPVLDGKN+SYWKPR+IFFIK LD KAWRALV+GY+  MITV+GVS+PKP+VDWTDAEEQAS+GN RA+N IFNG SKVKISRLQLIT
Subjt:  MEIIRKGPLAFCPPVLDGKNFSYWKPRLIFFIKILDRKAWRALVSGYEHSMITVDGVSVPKPEVDWTDAEEQASIGNGRAINAIFNGTSKVKISRLQLIT

Query:  LKFEALKMSEDEWVSEYNERVLEIANESLLLGEKIPDSKIMRKVLRSLSRKFDMKVTAIEEAHGITTLKLDELFGSLLTFEMTISDRENKKGKGITFKST
         KFEAL+M E+E VS+ N+RVLEIANESLL+GEKI DSKI+RKVLRS  RKFDMKVTAIEEAH ITTL+LDELFGSLLTFEM  +DRE+KKGKGI FKST
Subjt:  LKFEALKMSEDEWVSEYNERVLEIANESLLLGEKIPDSKIMRKVLRSLSRKFDMKVTAIEEAHGITTLKLDELFGSLLTFEMTISDRENKKGKGITFKST

Query:  YEEEATVNHSDNEANMDESIALLTK------------------------YRRSFGSKKKFRTIKGEDTDDAKDD-----------------------SSM
        + +E  +  SD EANMDESIALL K                        YRR         T +  +  D + D                       +++
Subjt:  YEEEATVNHSDNEANMDESIALLTK------------------------YRRSFGSKKKFRTIKGEDTDDAKDD-----------------------SSM

Query:  NAFTTCFTEIDLEDDSECSKEDGNEELTIEELKMLRKEDTEARAIQKERIQDLMKENERLMSIISSLKLKLKEVQNDYDQTIKSVKMLNSGTENLDSILK
        NAFT   T+ + +D+SECS+E  ++ELTIE+L+ L KED EARAIQKERIQDL++ENERLM+                               NL+SIL 
Subjt:  NAFTTCFTEIDLEDDSECSKEDGNEELTIEELKMLRKEDTEARAIQKERIQDLMKENERLMSIISSLKLKLKEVQNDYDQTIKSVKMLNSGTENLDSILK

Query:  SGQNSSHRYGLGFDASTSSLKSTFGVKFVPALRKAESKTTLTTTVGSPPAKSSERICYYCGRR-------------------------------------
        SG N S R+GLGF AS    K+T  +K VPA    E +TT T T      K+  R CYYCGR+                                     
Subjt:  SGQNSSHRYGLGFDASTSSLKSTFGVKFVPALRKAESKTTLTTTVGSPPAKSSERICYYCGRR-------------------------------------

Query:  ----------------------VMEMINVMVNDFESTAIRTYDEDDETLNILEKSSTLPVEVPKVDDQADSTNINSKIISKEVIADNFELVPSAHVRKNH
                              VME I+V++ND +S   +  DE+DET N+ E  +T  VEVPK D+ +  +  + +  S+E I    EL+ SAHV KNH
Subjt:  ----------------------VMEMINVMVNDFESTAIRTYDEDDETLNILEKSSTLPVEVPKVDDQADSTNINSKIISKEVIADNFELVPSAHVRKNH

Query:  PSSSIIGDPSAEIITRKRENVDYSKMIVDLCYTSAIESSTIDVALKDEY
        P+SSIIGDPSA + TR++E +DY  M+ DLCY S  E ST+D AL+DEY
Subjt:  PSSSIIGDPSAEIITRKRENVDYSKMIVDLCYTSAIESSTIDVALKDEY

TYK08443.1 putative mitochondrial protein [Cucumis melo var. makuwa]1.59e-20098.37Show/hide
Query:  TIKGEDTDDAKDDSSMNAFTTCFTEIDLEDDSECSKEDGNEELTIEELKMLRKEDTEARAIQKERIQDLMKENERLMSIISSLKLKLKEVQNDYDQTIKS
        T+ GEDTDDA+DDSSMNAFTTCFTEIDLEDDSECSKEDGNEELTIEELKMLRKEDTEARAIQKERIQDLMKENERLMSIISSLKLKLKEVQNDYDQTIKS
Subjt:  TIKGEDTDDAKDDSSMNAFTTCFTEIDLEDDSECSKEDGNEELTIEELKMLRKEDTEARAIQKERIQDLMKENERLMSIISSLKLKLKEVQNDYDQTIKS

Query:  VKMLNSGTENLDSILKSGQNSSHRYGLGFDASTSSLKSTFGVKFVPALRKAESKTTLTTTVGSPPAKSSERICYYCGRRVMEMINVMVNDFESTAIRTYD
        VKMLNSGTENLDSILKSGQNSSHRYGLGFDASTSSLKSTFG+KFVPALRKAESKTTLTTTVGSPPAKSSERICYYCGRRVMEMINVMVNDFESTAIRTYD
Subjt:  VKMLNSGTENLDSILKSGQNSSHRYGLGFDASTSSLKSTFGVKFVPALRKAESKTTLTTTVGSPPAKSSERICYYCGRRVMEMINVMVNDFESTAIRTYD

Query:  EDDETLNILEKSSTLPVEVPKVDDQADSTNINSKIISKEVIADNFELVPSAHVRKNHPSSSIIGDPSAEIITRKRENVDYSKMIVDLCYTSAIESSTIDV
        EDDET NILEKSSTLPVEVPKVDDQADSTNINSKIISKEVIADNFELVPSAHVRKNHPSSSIIGDPSAEIITRKRENVDYSKMIVDLCYTSAIESSTIDV
Subjt:  EDDETLNILEKSSTLPVEVPKVDDQADSTNINSKIISKEVIADNFELVPSAHVRKNHPSSSIIGDPSAEIITRKRENVDYSKMIVDLCYTSAIESSTIDV

Query:  ALKDEY
        ALKDEY
Subjt:  ALKDEY

TrEMBL top hitse value%identityAlignment
A0A5A7UXN7 Gag-proteinase polyprotein7.9e-14857.92Show/hide
Query:  MEIIRKGPLAFCPPVLDGKNFSYWKPRLIFFIKILDRKAWRALVSGYEHSMITVDGVSVPKPEVDWTDAEEQASIGNGRAINAIFNGTSKVKISRLQLIT
        MEIIR+ P   CPPVLD K +SYWKP                           +DGVSVPKPEVDWT+AEEQASI N R INAIFN              
Subjt:  MEIIRKGPLAFCPPVLDGKNFSYWKPRLIFFIKILDRKAWRALVSGYEHSMITVDGVSVPKPEVDWTDAEEQASIGNGRAINAIFNGTSKVKISRLQLIT

Query:  LKFEALKMSEDEWVSEYNERVLEIANESLLLGEKIPDSKIMRKVLRSLSRKFDMKVTAIEEAHGITTLKLDELFGSLLTFEMTISDRENKKGKGITFKST
                                        EKIPDSKI+RKVLRSL RKFD+KVTAIEEAH ITTLKLDELF SLLTFEM ISDRENKKGKGI FKST
Subjt:  LKFEALKMSEDEWVSEYNERVLEIANESLLLGEKIPDSKIMRKVLRSLSRKFDMKVTAIEEAHGITTLKLDELFGSLLTFEMTISDRENKKGKGITFKST

Query:  YEEEATVNHSDNEANMDESIALLT-------KYRRS--FGSKKK--------------------------------FRTIKGEDTDDAKDDSSMNAFTTC
        YEEEATVNHSDNEANMDE  A  T         RRS  +G KK+                                   +  EDT+D +DDSSMN FTT 
Subjt:  YEEEATVNHSDNEANMDESIALLT-------KYRRS--FGSKKK--------------------------------FRTIKGEDTDDAKDDSSMNAFTTC

Query:  FTEIDLEDDSECSKEDGNEELTIEELKMLRKEDTEARAIQKERIQDLMKENERLMSIISSLKLKLKEVQNDYDQTIKSVKMLNSGTENLDSILKSGQNSS
         TEIDL DD+ CS EDG+E++T+EEL+++RKED EARAIQKERIQ+LM+E+E LMS+ISSLKLKLKEVQNDY+QTIK VKMLNSGTENLD ILKSGQNSS
Subjt:  FTEIDLEDDSECSKEDGNEELTIEELKMLRKEDTEARAIQKERIQDLMKENERLMSIISSLKLKLKEVQNDYDQTIKSVKMLNSGTENLDSILKSGQNSS

Query:  HRYGLGFDASTSSLKSTFGVKFVPALRKAESKTTLTTTVGSPPAKSSERICYYCGRRVMEMINVMVNDFESTAIRTYDEDDETLNILEKSSTLPVEVPKV
         +  LGFD   SS KST  VKFV AL K E++TTLTTTV SPP KS  RICY+C                  A +TYDEDDETLNI   SST   +V K 
Subjt:  HRYGLGFDASTSSLKSTFGVKFVPALRKAESKTTLTTTVGSPPAKSSERICYYCGRRVMEMINVMVNDFESTAIRTYDEDDETLNILEKSSTLPVEVPKV

Query:  DDQADSTNINSKIISKEVIADNFELVPSAHVRKNHPSSSIIGDPSAEIITRKRENVDYSKMIVDLCYT
        D QA  T+INS   SKEVIADN ELVPSAHVRKNHP SSIIGDPSA I TRK+E V YSKMI DLCYT
Subjt:  DDQADSTNINSKIISKEVIADNFELVPSAHVRKNHPSSSIIGDPSAEIITRKRENVDYSKMIVDLCYT

A0A5A7UY13 Putative mitochondrial protein5.3e-16099.35Show/hide
Query:  TIKGEDTDDAKDDSSMNAFTTCFTEIDLEDDSECSKEDGNEELTIEELKMLRKEDTEARAIQKERIQDLMKENERLMSIISSLKLKLKEVQNDYDQTIKS
        T+ GEDTDDAKDDSSMNAFTTCFTEIDLEDDSECSKEDGNEELTIEELKMLRKEDTEARAIQKERIQDLMKENERLMSIISSLKLKLKEVQNDYDQTIKS
Subjt:  TIKGEDTDDAKDDSSMNAFTTCFTEIDLEDDSECSKEDGNEELTIEELKMLRKEDTEARAIQKERIQDLMKENERLMSIISSLKLKLKEVQNDYDQTIKS

Query:  VKMLNSGTENLDSILKSGQNSSHRYGLGFDASTSSLKSTFGVKFVPALRKAESKTTLTTTVGSPPAKSSERICYYCGRRVMEMINVMVNDFESTAIRTYD
        VKMLNSGTENLDSILKSGQNSSHRYGLGFDASTSSLKSTFGVKFVPALRKAESKTTLTTTVGSPPAKSSERICYYCGRRVMEMINVMVNDFESTAIRTYD
Subjt:  VKMLNSGTENLDSILKSGQNSSHRYGLGFDASTSSLKSTFGVKFVPALRKAESKTTLTTTVGSPPAKSSERICYYCGRRVMEMINVMVNDFESTAIRTYD

Query:  EDDETLNILEKSSTLPVEVPKVDDQADSTNINSKIISKEVIADNFELVPSAHVRKNHPSSSIIGDPSAEIITRKRENVDYSKMIVDLCYTSAIESSTIDV
        EDDETLNILEKSSTLPVEVPKVDDQADSTNINSKIISKEVIADNFELVPSAHVRKNHPSSSIIGDPSAEIITRKRENVDYSKMIVDLCYTSAIESSTIDV
Subjt:  EDDETLNILEKSSTLPVEVPKVDDQADSTNINSKIISKEVIADNFELVPSAHVRKNHPSSSIIGDPSAEIITRKRENVDYSKMIVDLCYTSAIESSTIDV

Query:  ALKDEY
        ALKDEY
Subjt:  ALKDEY

A0A5D3BEV2 Gag-pol polyprotein1.3e-14549.69Show/hide
Query:  MEIIRKGPLAFCPPVLDGKNFSYWKPRLIFFIKILDRKAWRALVSGYEHSMITVDGVSVPKPEVDWTDAEEQASIGNGRAINAIFNGTSKVKISRLQLIT
        MEIIR+GP A CPPVLDGKN+SYWKPR+IFFIK LD KAWRALV+GY+  MITV+GVS+PKP+VDWTDAEEQAS+GN RA+N IFNG SKVKISRLQLIT
Subjt:  MEIIRKGPLAFCPPVLDGKNFSYWKPRLIFFIKILDRKAWRALVSGYEHSMITVDGVSVPKPEVDWTDAEEQASIGNGRAINAIFNGTSKVKISRLQLIT

Query:  LKFEALKMSEDEWVSEYNERVLEIANESLLLGEKIPDSKIMRKVLRSLSRKFDMKVTAIEEAHGITTLKLDELFGSLLTFEMTISDRENKKGKGITFKST
         KFEAL+M E+E VS+ N+RVLEIANESLL+GEKI DSKI+RKVLRS  RKFDMKVTAIEEAH ITTL+LDELFGSLLTFEM  +DRE+KKGKGI FKST
Subjt:  LKFEALKMSEDEWVSEYNERVLEIANESLLLGEKIPDSKIMRKVLRSLSRKFDMKVTAIEEAHGITTLKLDELFGSLLTFEMTISDRENKKGKGITFKST

Query:  YEEEATVNHSDNEANMDESIALLTKYRRSFGSKKK--------------FR-------TIKGEDTDDAKDD-----------------------SSMNAF
        + +E  +  SD EANMDESIALL K   +   K K              +R       T +  +  D + D                       +++NAF
Subjt:  YEEEATVNHSDNEANMDESIALLTKYRRSFGSKKK--------------FR-------TIKGEDTDDAKDD-----------------------SSMNAF

Query:  TTCFTEIDLEDDSECSKEDGNEELTIEELKMLRKEDTEARAIQKERIQDLMKENERLMSIISSLKLKLKEVQNDYDQTIKSVKMLNSGTENLDSILKSGQ
        T   T+ + +D+SECS+E  ++ELTIE+L+ L KED EARAIQKERIQDL++ENERLM+                               NL+SIL SG 
Subjt:  TTCFTEIDLEDDSECSKEDGNEELTIEELKMLRKEDTEARAIQKERIQDLMKENERLMSIISSLKLKLKEVQNDYDQTIKSVKMLNSGTENLDSILKSGQ

Query:  NSSHRYGLGFDASTSSLKSTFGVKFVPALRKAESKTTLTTTVGSPPAKSSERICYYCGRR----------------------------------------
        N S R+GLGF AS    K+T  +K VPA    E +TT T T      K+  R CYYCGR+                                        
Subjt:  NSSHRYGLGFDASTSSLKSTFGVKFVPALRKAESKTTLTTTVGSPPAKSSERICYYCGRR----------------------------------------

Query:  -------------------VMEMINVMVNDFESTAIRTYDEDDETLNILEKSSTLPVEVPKVDDQADSTNINSKIISKEVIADNFELVPSAHVRKNHPSS
                           VME I+V++ND +S   +  DE+DET N+ E  +T  VEVPK D+ +  +  + +  S+E I    EL+ SAHV KNHP+S
Subjt:  -------------------VMEMINVMVNDFESTAIRTYDEDDETLNILEKSSTLPVEVPKVDDQADSTNINSKIISKEVIADNFELVPSAHVRKNHPSS

Query:  SIIGDPSAEIITRKRENVDYSKMIVDLCYTSAIESSTIDVALKDEY
        SIIGDPSA + TR++E +DY  M+ DLCY S  E ST+D AL+DEY
Subjt:  SIIGDPSAEIITRKRENVDYSKMIVDLCYTSAIESSTIDVALKDEY

A0A5D3C964 Putative mitochondrial protein1.0e-15898.37Show/hide
Query:  TIKGEDTDDAKDDSSMNAFTTCFTEIDLEDDSECSKEDGNEELTIEELKMLRKEDTEARAIQKERIQDLMKENERLMSIISSLKLKLKEVQNDYDQTIKS
        T+ GEDTDDA+DDSSMNAFTTCFTEIDLEDDSECSKEDGNEELTIEELKMLRKEDTEARAIQKERIQDLMKENERLMSIISSLKLKLKEVQNDYDQTIKS
Subjt:  TIKGEDTDDAKDDSSMNAFTTCFTEIDLEDDSECSKEDGNEELTIEELKMLRKEDTEARAIQKERIQDLMKENERLMSIISSLKLKLKEVQNDYDQTIKS

Query:  VKMLNSGTENLDSILKSGQNSSHRYGLGFDASTSSLKSTFGVKFVPALRKAESKTTLTTTVGSPPAKSSERICYYCGRRVMEMINVMVNDFESTAIRTYD
        VKMLNSGTENLDSILKSGQNSSHRYGLGFDASTSSLKSTFG+KFVPALRKAESKTTLTTTVGSPPAKSSERICYYCGRRVMEMINVMVNDFESTAIRTYD
Subjt:  VKMLNSGTENLDSILKSGQNSSHRYGLGFDASTSSLKSTFGVKFVPALRKAESKTTLTTTVGSPPAKSSERICYYCGRRVMEMINVMVNDFESTAIRTYD

Query:  EDDETLNILEKSSTLPVEVPKVDDQADSTNINSKIISKEVIADNFELVPSAHVRKNHPSSSIIGDPSAEIITRKRENVDYSKMIVDLCYTSAIESSTIDV
        EDDET NILEKSSTLPVEVPKVDDQADSTNINSKIISKEVIADNFELVPSAHVRKNHPSSSIIGDPSAEIITRKRENVDYSKMIVDLCYTSAIESSTIDV
Subjt:  EDDETLNILEKSSTLPVEVPKVDDQADSTNINSKIISKEVIADNFELVPSAHVRKNHPSSSIIGDPSAEIITRKRENVDYSKMIVDLCYTSAIESSTIDV

Query:  ALKDEY
        ALKDEY
Subjt:  ALKDEY

A0A5D3E0I8 Gag-pol polyprotein8.7e-16370.6Show/hide
Query:  MEIIRKGPLAFCPPVLDGKNFSYWKPRLIFFIKILDRKAWRALVSGYEHSMITVDGVSVPKPEVDWTDAEEQASIG-----NGRAINAIFNGTSKVKISR
        MEIIRK P    P VLDGKN+SYWKPR+IFFIK L+ KAWRA V+GYE  MIT+DGVSV KPEVDW DA+ +  +G       R +   + GTSKVKISR
Subjt:  MEIIRKGPLAFCPPVLDGKNFSYWKPRLIFFIKILDRKAWRALVSGYEHSMITVDGVSVPKPEVDWTDAEEQASIG-----NGRAINAIFNGTSKVKISR

Query:  LQLITLKFEALKMSEDEWVSEYNERVLEIANESLLLGEKIPDSKIMRKVLRSLSRKFDMKVTAIEEAHGITTLKLDELFGSLLTFEMTISDRENKKGKGI
        LQLIT KFEALKMSEDE V EYNERVLEIANESLLLGEKIPDSKI+RKVL+SL RKFD KVTAIE+AH ITTLKLDELFGSLLTFEM ISDRENKKGK I
Subjt:  LQLITLKFEALKMSEDEWVSEYNERVLEIANESLLLGEKIPDSKIMRKVLRSLSRKFDMKVTAIEEAHGITTLKLDELFGSLLTFEMTISDRENKKGKGI

Query:  TFKSTYEEEATVNHSDNEANMDESIALLTK------------------------YRR-------------------SFGSKK----KFRTIKGEDTDDAK
         FKSTYEEEA VNHSDNE NMDESIALLTK                        YR+                    +G K     +F +    DTDDA+
Subjt:  TFKSTYEEEATVNHSDNEANMDESIALLTK------------------------YRR-------------------SFGSKK----KFRTIKGEDTDDAK

Query:  DDSSMNAFTTCFTEIDLEDDSECSKEDGNEELTIEELKMLRKEDTEARAIQKERIQDLMKENERLMSIISSLKLKLKEVQNDYDQTIKSVKMLNSGTENL
        DDSSMNAFTTCFTEIDLE+DSEC+ ED +EELTIEELKMLRKEDT+AR IQKERIQDLM+ENE+LMS+ISSLKLKLKEVQNDYDQTIK VKMLNS TENL
Subjt:  DDSSMNAFTTCFTEIDLEDDSECSKEDGNEELTIEELKMLRKEDTEARAIQKERIQDLMKENERLMSIISSLKLKLKEVQNDYDQTIKSVKMLNSGTENL

Query:  DSILKSGQNSSHRYGLGFDASTSSLKSTFGVKFVPALRKAESKTTLTTTVGSPPAKSSERICYYCG
        DSIL SGQ+SSHRYGLGFDAS SS KST GVKFVPALRK +S+T LTTTV  P AK SERICYYCG
Subjt:  DSILKSGQNSSHRYGLGFDASTSSLKSTFGVKFVPALRKAESKTTLTTTVGSPPAKSSERICYYCG

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGAGATAATCAGAAAGGGACCATTAGCTTTTTGTCCTCCTGTACTGGATGGAAAAAATTTCTCATATTGGAAGCCTCGTTTGATATTTTTTATTAAAATATTAGATAG
AAAAGCGTGGAGAGCCCTTGTTTCTGGTTATGAACATTCGATGATTACTGTTGATGGTGTATCAGTACCAAAACCTGAGGTTGATTGGACTGATGCTGAAGAACAAGCAT
CAATTGGGAATGGGAGAGCTATTAATGCGATTTTCAATGGGACTTCTAAAGTTAAGATATCTAGATTACAACTGATAACATTGAAATTTGAAGCATTGAAAATGTCTGAA
GATGAATGGGTTTCTGAGTATAATGAGAGAGTTCTGGAAATAGCTAATGAATCTCTCTTGCTTGGAGAAAAAATTCCTGACTCTAAGATTATGCGGAAAGTGCTTCGCTC
TCTATCGAGGAAATTTGATATGAAAGTCACTGCCATAGAGGAAGCACATGGCATTACTACATTAAAACTTGATGAGCTATTTGGGTCCCTGCTTACTTTTGAAATGACTA
TATCTGATAGAGAGAACAAGAAAGGCAAGGGGATCACATTTAAATCCACATATGAAGAAGAGGCAACAGTGAATCATTCTGATAATGAAGCCAACATGGATGAGTCAATA
GCTCTATTGACAAAGTATAGAAGAAGCTTTGGATCGAAGAAGAAGTTCAGAACTATAAAAGGTGAGGATACTGATGATGCTAAAGATGATAGTAGCATGAATGCCTTTAC
AACATGTTTTACCGAAATTGATCTCGAAGATGATAGTGAATGTTCTAAGGAAGATGGTAATGAAGAACTAACTATTGAAGAACTCAAGATGTTGAGGAAAGAAGACACTG
AAGCTAGAGCAATTCAAAAGGAAAGAATTCAAGATCTAATGAAAGAGAATGAACGATTAATGTCAATCATATCATCTCTAAAGCTGAAATTGAAAGAGGTTCAAAATGAT
TATGATCAGACAATCAAATCTGTTAAGATGTTAAACTCAGGGACTGAAAACTTAGATTCAATACTTAAATCAGGACAGAATAGTTCACATAGATATGGTCTTGGCTTTGA
TGCCTCAACAAGTAGTCTTAAATCTACATTTGGAGTAAAGTTTGTTCCTGCTTTAAGGAAAGCCGAATCTAAAACAACTTTAACAACTACTGTCGGTAGTCCCCCTGCTA
AATCTTCCGAAAGGATCTGTTATTACTGTGGTCGAAGAGTTATGGAAATGATAAATGTTATGGTAAATGATTTTGAATCAACCGCCATACGAACTTATGATGAGGATGAT
GAGACTCTAAATATACTTGAGAAATCTTCTACGCTTCCTGTGGAAGTACCTAAAGTTGATGATCAAGCAGATAGTACTAATATAAACTCAAAAATAATATCTAAGGAAGT
TATAGCCGATAACTTTGAACTGGTTCCTTCTGCACATGTGAGAAAGAATCATCCATCAAGTTCTATAATAGGTGATCCTTCAGCTGAAATCATTACTAGGAAAAGGGAGA
ATGTAGATTACTCGAAGATGATTGTTGATTTATGTTATACATCTGCCATTGAATCTTCAACTATTGATGTTGCTCTAAAAGATGAATATTAG
mRNA sequenceShow/hide mRNA sequence
ATGGAGATAATCAGAAAGGGACCATTAGCTTTTTGTCCTCCTGTACTGGATGGAAAAAATTTCTCATATTGGAAGCCTCGTTTGATATTTTTTATTAAAATATTAGATAG
AAAAGCGTGGAGAGCCCTTGTTTCTGGTTATGAACATTCGATGATTACTGTTGATGGTGTATCAGTACCAAAACCTGAGGTTGATTGGACTGATGCTGAAGAACAAGCAT
CAATTGGGAATGGGAGAGCTATTAATGCGATTTTCAATGGGACTTCTAAAGTTAAGATATCTAGATTACAACTGATAACATTGAAATTTGAAGCATTGAAAATGTCTGAA
GATGAATGGGTTTCTGAGTATAATGAGAGAGTTCTGGAAATAGCTAATGAATCTCTCTTGCTTGGAGAAAAAATTCCTGACTCTAAGATTATGCGGAAAGTGCTTCGCTC
TCTATCGAGGAAATTTGATATGAAAGTCACTGCCATAGAGGAAGCACATGGCATTACTACATTAAAACTTGATGAGCTATTTGGGTCCCTGCTTACTTTTGAAATGACTA
TATCTGATAGAGAGAACAAGAAAGGCAAGGGGATCACATTTAAATCCACATATGAAGAAGAGGCAACAGTGAATCATTCTGATAATGAAGCCAACATGGATGAGTCAATA
GCTCTATTGACAAAGTATAGAAGAAGCTTTGGATCGAAGAAGAAGTTCAGAACTATAAAAGGTGAGGATACTGATGATGCTAAAGATGATAGTAGCATGAATGCCTTTAC
AACATGTTTTACCGAAATTGATCTCGAAGATGATAGTGAATGTTCTAAGGAAGATGGTAATGAAGAACTAACTATTGAAGAACTCAAGATGTTGAGGAAAGAAGACACTG
AAGCTAGAGCAATTCAAAAGGAAAGAATTCAAGATCTAATGAAAGAGAATGAACGATTAATGTCAATCATATCATCTCTAAAGCTGAAATTGAAAGAGGTTCAAAATGAT
TATGATCAGACAATCAAATCTGTTAAGATGTTAAACTCAGGGACTGAAAACTTAGATTCAATACTTAAATCAGGACAGAATAGTTCACATAGATATGGTCTTGGCTTTGA
TGCCTCAACAAGTAGTCTTAAATCTACATTTGGAGTAAAGTTTGTTCCTGCTTTAAGGAAAGCCGAATCTAAAACAACTTTAACAACTACTGTCGGTAGTCCCCCTGCTA
AATCTTCCGAAAGGATCTGTTATTACTGTGGTCGAAGAGTTATGGAAATGATAAATGTTATGGTAAATGATTTTGAATCAACCGCCATACGAACTTATGATGAGGATGAT
GAGACTCTAAATATACTTGAGAAATCTTCTACGCTTCCTGTGGAAGTACCTAAAGTTGATGATCAAGCAGATAGTACTAATATAAACTCAAAAATAATATCTAAGGAAGT
TATAGCCGATAACTTTGAACTGGTTCCTTCTGCACATGTGAGAAAGAATCATCCATCAAGTTCTATAATAGGTGATCCTTCAGCTGAAATCATTACTAGGAAAAGGGAGA
ATGTAGATTACTCGAAGATGATTGTTGATTTATGTTATACATCTGCCATTGAATCTTCAACTATTGATGTTGCTCTAAAAGATGAATATTAG
Protein sequenceShow/hide protein sequence
MEIIRKGPLAFCPPVLDGKNFSYWKPRLIFFIKILDRKAWRALVSGYEHSMITVDGVSVPKPEVDWTDAEEQASIGNGRAINAIFNGTSKVKISRLQLITLKFEALKMSE
DEWVSEYNERVLEIANESLLLGEKIPDSKIMRKVLRSLSRKFDMKVTAIEEAHGITTLKLDELFGSLLTFEMTISDRENKKGKGITFKSTYEEEATVNHSDNEANMDESI
ALLTKYRRSFGSKKKFRTIKGEDTDDAKDDSSMNAFTTCFTEIDLEDDSECSKEDGNEELTIEELKMLRKEDTEARAIQKERIQDLMKENERLMSIISSLKLKLKEVQND
YDQTIKSVKMLNSGTENLDSILKSGQNSSHRYGLGFDASTSSLKSTFGVKFVPALRKAESKTTLTTTVGSPPAKSSERICYYCGRRVMEMINVMVNDFESTAIRTYDEDD
ETLNILEKSSTLPVEVPKVDDQADSTNINSKIISKEVIADNFELVPSAHVRKNHPSSSIIGDPSAEIITRKRENVDYSKMIVDLCYTSAIESSTIDVALKDEY