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IVF0019106 (gene) of Melon (IVF77) v1 genome

Gene IDIVF0019106
OrganismCucumis melo ssp. agrestis cv. IVF77 (Melon (IVF77) v1)
DescriptionRetrotransposon protein
Genome locationchr06:21089216..21089383
RNA-Seq ExpressionIVF0019106
SyntenyIVF0019106
Gene Ontology termsGO:0046872 - metal ion binding (molecular function)
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0025501.1 retrotransposon protein [Cucumis melo var. makuwa]5.35e-30100Show/hide
Query:  MIYCEDVDNEDEGDSTYATTTASEDIQYIETTNEWSQWRDDLAESMFTEWQLRNA
        MIYCEDVDNEDEGDSTYATTTASEDIQYIETTNEWSQWRDDLAESMFTEWQLRNA
Subjt:  MIYCEDVDNEDEGDSTYATTTASEDIQYIETTNEWSQWRDDLAESMFTEWQLRNA
KAA0058871.1 retrotransposon protein [Cucumis melo var. makuwa]6.48e-3094.55Show/hide
Query:  MIYCEDVDNEDEGDSTYATTTASEDIQYIETTNEWSQWRDDLAESMFTEWQLRNA
        M YCEDVD+EDEGDSTY TTTASEDIQYIETTNEWSQWRDDLAESMFTEWQLRNA
Subjt:  MIYCEDVDNEDEGDSTYATTTASEDIQYIETTNEWSQWRDDLAESMFTEWQLRNA
KAA0062284.1 retrotransposon protein [Cucumis melo var. makuwa]6.48e-3092.73Show/hide
Query:  MIYCEDVDNEDEGDSTYATTTASEDIQYIETTNEWSQWRDDLAESMFTEWQLRNA
        M YC+D+D+EDEGDSTYATTTASEDIQYIETTNEWSQWRDDLAESMFTEWQLRNA
Subjt:  MIYCEDVDNEDEGDSTYATTTASEDIQYIETTNEWSQWRDDLAESMFTEWQLRNA
TYK05336.1 retrotransposon protein [Cucumis melo var. makuwa]1.31e-2992.73Show/hide
Query:  MIYCEDVDNEDEGDSTYATTTASEDIQYIETTNEWSQWRDDLAESMFTEWQLRNA
        M YCEDVD+EDEGDSTYATTTASEDIQYIETTNEWSQWRDDLAESMFT+WQLRN+
Subjt:  MIYCEDVDNEDEGDSTYATTTASEDIQYIETTNEWSQWRDDLAESMFTEWQLRNA
TYK11987.1 retrotransposon protein [Cucumis melo var. makuwa]5.32e-2992.73Show/hide
Query:  MIYCEDVDNEDEGDSTYATTTASEDIQYIETTNEWSQWRDDLAESMFTEWQLRNA
        M YC DVD+EDEGDSTYATTTASEDIQYIETTNEWSQWR+DLAESMFTEWQLRNA
Subjt:  MIYCEDVDNEDEGDSTYATTTASEDIQYIETTNEWSQWRDDLAESMFTEWQLRNA
TrEMBL top hitse value%identityAlignment
A0A5A7SZH3 Retrotransposon protein9.9e-2294.55Show/hide
Query:  MIYCEDVDNEDEGDSTYATTTASEDIQYIETTNEWSQWRDDLAESMFTEWQLRNA
        M YCEDVD+ED+GDSTYATTTASEDIQYIETTNEWSQWRDDLAESMFTEWQLRNA
Subjt:  MIYCEDVDNEDEGDSTYATTTASEDIQYIETTNEWSQWRDDLAESMFTEWQLRNA
A0A5A7UID8 Retrotransposon protein1.7e-2194.55Show/hide
Query:  MIYCEDVDNEDEGDSTYATTTASEDIQYIETTNEWSQWRDDLAESMFTEWQLRNA
        M YCEDVD+EDEG+STYATTTASEDIQYIETTNEWSQWRDDLAESMFTEWQLRNA
Subjt:  MIYCEDVDNEDEGDSTYATTTASEDIQYIETTNEWSQWRDDLAESMFTEWQLRNA
A0A5A7UZF0 Retrotransposon protein1.3e-2194.55Show/hide
Query:  MIYCEDVDNEDEGDSTYATTTASEDIQYIETTNEWSQWRDDLAESMFTEWQLRNA
        M YCEDVD+EDEGDSTY TTTASEDIQYIETTNEWSQWRDDLAESMFTEWQLRNA
Subjt:  MIYCEDVDNEDEGDSTYATTTASEDIQYIETTNEWSQWRDDLAESMFTEWQLRNA
A0A5A7V4Q8 Retrotransposon protein1.3e-2192.73Show/hide
Query:  MIYCEDVDNEDEGDSTYATTTASEDIQYIETTNEWSQWRDDLAESMFTEWQLRNA
        M YC+D+D+EDEGDSTYATTTASEDIQYIETTNEWSQWRDDLAESMFTEWQLRNA
Subjt:  MIYCEDVDNEDEGDSTYATTTASEDIQYIETTNEWSQWRDDLAESMFTEWQLRNA
A0A5D3BKS9 Retrotransposon protein3.1e-23100Show/hide
Query:  MIYCEDVDNEDEGDSTYATTTASEDIQYIETTNEWSQWRDDLAESMFTEWQLRNA
        MIYCEDVDNEDEGDSTYATTTASEDIQYIETTNEWSQWRDDLAESMFTEWQLRNA
Subjt:  MIYCEDVDNEDEGDSTYATTTASEDIQYIETTNEWSQWRDDLAESMFTEWQLRNA
SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGATATATTGCGAGGACGTTGACAACGAGGATGAGGGGGACTCCACGTACGCGACGACCACCGCTTCAGAAGACATTCAGTACATTGAGACAACAAATGAGTGGTCTCA
GTGGCGCGACGACCTAGCCGAATCGATGTTCACCGAATGGCAGTTGCGTAACGCTTAG
mRNA sequenceShow/hide mRNA sequence
ATGATATATTGCGAGGACGTTGACAACGAGGATGAGGGGGACTCCACGTACGCGACGACCACCGCTTCAGAAGACATTCAGTACATTGAGACAACAAATGAGTGGTCTCA
GTGGCGCGACGACCTAGCCGAATCGATGTTCACCGAATGGCAGTTGCGTAACGCTTAG
Protein sequenceShow/hide protein sequence
MIYCEDVDNEDEGDSTYATTTASEDIQYIETTNEWSQWRDDLAESMFTEWQLRNA