CuGenDBv2

Gene ID	IVF0019108
Organism	Cucumis melo ssp. agrestis cv. IVF77 (Melon (IVF77) v1)
Description	Cytochrome c oxidase assembly factor 6
Genome location	chr03:6597584..6599721
RNA-Seq Expression	IVF0019108
Synteny	IVF0019108
Gene Ontology terms	NA
InterPro domains	NA

Homology

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GenBank top hits

e value

%identity

Alignment

TYK18681.1 cytochrome c oxidase assembly factor 6 [Cucumis melo var. makuwa]

9.24e-28

75.34

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Query:  MAIEAVSSGGFDEVHADFLSKSRQACYKKESDKKPTKIALIDLITVKYFDRKFCQNSRVHRLLDDKDLRRDRI
        MAIEAVSSGGFDEVHADFLSKSRQACYK                 VKYFDRKFCQNSRVHRLLDDKDLRRDR+
Subjt:  MAIEAVSSGGFDEVHADFLSKSRQACYKKESDKKPTKIALIDLITVKYFDRKFCQNSRVHRLLDDKDLRRDRI

XP_008443871.1 PREDICTED: uncharacterized protein LOC103487365 isoform X1 [Cucumis melo]

2.15e-23

57.58

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Query:  MAIEAVSSGGFDEVHADFLSKSRQACYK----------KESDKKPTKIALIDLIT-------------------VKYFDRKFCQNSRVHRLLDDKDLRR
        MA+EA SSGG DEVH D LS+SRQACYK          KESDKKPT+IA + LI                    VK+FDRKFCQNSRV RLLDDKDLRR
Subjt:  MAIEAVSSGGFDEVHADFLSKSRQACYK----------KESDKKPTKIALIDLIT-------------------VKYFDRKFCQNSRVHRLLDDKDLRR

XP_008443874.1 PREDICTED: uncharacterized protein LOC103487365 isoform X2 [Cucumis melo]

1.54e-23

57.58

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Query:  MAIEAVSSGGFDEVHADFLSKSRQACYK----------KESDKKPTKIALIDLIT-------------------VKYFDRKFCQNSRVHRLLDDKDLRR
        MA+EA SSGG DEVH D LS+SRQACYK          KESDKKPT+IA + LI                    VK+FDRKFCQNSRV RLLDDKDLRR
Subjt:  MAIEAVSSGGFDEVHADFLSKSRQACYK----------KESDKKPTKIALIDLIT-------------------VKYFDRKFCQNSRVHRLLDDKDLRR

XP_011655954.1 uncharacterized protein LOC101212489 isoform X2 [Cucumis sativus]

4.40e-23

57.58

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Query:  MAIEAVSSGGFDEVHADFLSKSRQACYK----------KESDKKPTKIALIDLIT-------------------VKYFDRKFCQNSRVHRLLDDKDLRR
        MA EA SSGG DEVH D LS+SRQACYK          KESDKKPT+IA + LI                    VK+FDRKFCQNSRV RLLDDKDLRR
Subjt:  MAIEAVSSGGFDEVHADFLSKSRQACYK----------KESDKKPTKIALIDLIT-------------------VKYFDRKFCQNSRVHRLLDDKDLRR

XP_031745355.1 cytochrome c oxidase assembly factor 6 isoform X3 [Cucumis sativus]

4.40e-23

57.58

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Query:  MAIEAVSSGGFDEVHADFLSKSRQACYK----------KESDKKPTKIALIDLIT-------------------VKYFDRKFCQNSRVHRLLDDKDLRR
        MA EA SSGG DEVH D LS+SRQACYK          KESDKKPT+IA + LI                    VK+FDRKFCQNSRV RLLDDKDLRR
Subjt:  MAIEAVSSGGFDEVHADFLSKSRQACYK----------KESDKKPTKIALIDLIT-------------------VKYFDRKFCQNSRVHRLLDDKDLRR

TrEMBL top hits

e value

%identity

Alignment

A0A0A0LTX1 Uncharacterized protein

1.7e-16

57.58

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Query:  MAIEAVSSGGFDEVHADFLSKSRQACYK----------KESDKKPTKIALIDLI-------------------TVKYFDRKFCQNSRVHRLLDDKDLRR
        MA EA SSGG DEVH D LS+SRQACYK          KESDKKPT+IA + LI                    VK+FDRKFCQNSRV RLLDDKDLRR
Subjt:  MAIEAVSSGGFDEVHADFLSKSRQACYK----------KESDKKPTKIALIDLI-------------------TVKYFDRKFCQNSRVHRLLDDKDLRR

A0A1S3B914 uncharacterized protein LOC103487365 isoform X2

7.5e-17

57.58

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Query:  MAIEAVSSGGFDEVHADFLSKSRQACYK----------KESDKKPTKIALIDLI-------------------TVKYFDRKFCQNSRVHRLLDDKDLRR
        MA+EA SSGG DEVH D LS+SRQACYK          KESDKKPT+IA + LI                    VK+FDRKFCQNSRV RLLDDKDLRR
Subjt:  MAIEAVSSGGFDEVHADFLSKSRQACYK----------KESDKKPTKIALIDLI-------------------TVKYFDRKFCQNSRVHRLLDDKDLRR

A0A1S3B9T5 uncharacterized protein LOC103487365 isoform X1

7.5e-17

57.58

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Query:  MAIEAVSSGGFDEVHADFLSKSRQACYK----------KESDKKPTKIALIDLI-------------------TVKYFDRKFCQNSRVHRLLDDKDLRR
        MA+EA SSGG DEVH D LS+SRQACYK          KESDKKPT+IA + LI                    VK+FDRKFCQNSRV RLLDDKDLRR
Subjt:  MAIEAVSSGGFDEVHADFLSKSRQACYK----------KESDKKPTKIALIDLI-------------------TVKYFDRKFCQNSRVHRLLDDKDLRR

A0A5A7SVN2 Cytochrome c oxidase assembly factor 6 isoform X3

7.5e-17

57.58

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Query:  MAIEAVSSGGFDEVHADFLSKSRQACYK----------KESDKKPTKIALIDLI-------------------TVKYFDRKFCQNSRVHRLLDDKDLRR
        MA+EA SSGG DEVH D LS+SRQACYK          KESDKKPT+IA + LI                    VK+FDRKFCQNSRV RLLDDKDLRR
Subjt:  MAIEAVSSGGFDEVHADFLSKSRQACYK----------KESDKKPTKIALIDLI-------------------TVKYFDRKFCQNSRVHRLLDDKDLRR

A0A5D3D560 Cytochrome c oxidase assembly factor 6

1.6e-19

75.34

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Query:  MAIEAVSSGGFDEVHADFLSKSRQACYKKESDKKPTKIALIDLITVKYFDRKFCQNSRVHRLLDDKDLRRDRI
        MAIEAVSSGGFDEVHADFLSKSRQACYK                 VKYFDRKFCQNSRVHRLLDDKDLRRDR+
Subjt:  MAIEAVSSGGFDEVHADFLSKSRQACYKKESDKKPTKIALIDLITVKYFDRKFCQNSRVHRLLDDKDLRRDRI

SwissProt top hits	e value	%identity	Alignment
No hits found

Arabidopsis top hits

e value

%identity

Alignment

AT5G58005.1 Cytochrome c oxidase, subunit Vib family protein

2.7e-11

38.83

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Query:  MAIEAVSSGGFDEVHADFLSKSRQACYK----------KESDKKPTKIALIDLI-------------------TVKYFDRKFCQNSRVHRLLDDKDLRRD
        MA++  +S   ++VH D L K+R ACYK          KES KKPT+IA + L+                    VK+FDR++C+N RV RLLDD D R+ 
Subjt:  MAIEAVSSGGFDEVHADFLSKSRQACYK----------KESDKKPTKIALIDLI-------------------TVKYFDRKFCQNSRVHRLLDDKDLRRD

Query:  RIS
         +S
Subjt:  RIS

AT5G58005.2 Cytochrome c oxidase, subunit Vib family protein

2.7e-11

38.83

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Query:  MAIEAVSSGGFDEVHADFLSKSRQACYK----------KESDKKPTKIALIDLI-------------------TVKYFDRKFCQNSRVHRLLDDKDLRRD
        MA++  +S   ++VH D L K+R ACYK          KES KKPT+IA + L+                    VK+FDR++C+N RV RLLDD D R+ 
Subjt:  MAIEAVSSGGFDEVHADFLSKSRQACYK----------KESDKKPTKIALIDLI-------------------TVKYFDRKFCQNSRVHRLLDDKDLRRD

Query:  RIS
         +S
Subjt:  RIS

Sequences

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CDS sequence

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ATGGCTATCGAAGCTGTCTCATCTGGAGGCTTCGATGAAGTTCATGCGGATTTTCTATCGAAATCAAGACAAGCTTGCTACAAGAAGGAATCCGATAAAAAACCTACTAA
AATTGCTTTAATTGACCTTATTACAGTGAAGTATTTTGATAGGAAGTTTTGTCAGAACAGCAGAGTTCATAGACTCCTAGATGACAAAGATTTGAGGAGAGATCGCATTA
GTTAA

mRNA sequence

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Protein sequence

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MAIEAVSSGGFDEVHADFLSKSRQACYKKESDKKPTKIALIDLITVKYFDRKFCQNSRVHRLLDDKDLRRDRIS

IVF0019108 (gene) of Melon (IVF77) v1 genome