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IVF0019136 (gene) of Melon (IVF77) v1 genome

Gene IDIVF0019136
OrganismCucumis melo ssp. agrestis cv. IVF77 (Melon (IVF77) v1)
DescriptionGag-pol polyprotein
Genome locationchr05:16883901..16884455
RNA-Seq ExpressionIVF0019136
SyntenyIVF0019136
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0032633.1 putative mitochondrial protein [Cucumis melo var. makuwa]1.18e-3645.25Show/hide
Query:  MESINVIVDDYSQTTKSRLDEEDGFFWADKSQAIRLTRLSLQLVI--------------------------LEISLSECSISDYQQTPAHSSQNDPTDVN
        MESINVI+DD+ +T+K   +EED  FW   SQ IR TR     +I                           +   SE S S  QQT        PT + 
Subjt:  MESINVIVDDYSQTTKSRLDEEDGFFWADKSQAIRLTRLSLQLVI--------------------------LEISLSECSISDYQQTPAHSSQNDPTDVN

Query:  NSTESSMQNLMSSTYVAKNHPPNAIIGDARSDITTQKKEQSDYAKMVANVCFTSTMEPTTVTDALKDDQWILAMQQKLL
        ++  SS+Q LM   ++AKNHP N+IIGD +S +TT+KKE  DYAKMVANVC+TST+EPT VT AL D+ W+LAMQ++LL
Subjt:  NSTESSMQNLMSSTYVAKNHPPNAIIGDARSDITTQKKEQSDYAKMVANVCFTSTMEPTTVTDALKDDQWILAMQQKLL

KAA0035772.1 flocculation protein FLO11-like [Cucumis melo var. makuwa]1.85e-3848.07Show/hide
Query:  MESINVIVDDYSQTTKSRLDEEDGFFWADKSQAIRLTRLSLQLVILE---------------------ISLSECSISDYQQTPAHSSQNDPTDVNNSTES
        MESINVI+D   +  K  LDEEDG FW   SQ  + TR  +  +  E                     +S SE   S    T    +    T+  +S +S
Subjt:  MESINVIVDDYSQTTKSRLDEEDGFFWADKSQAIRLTRLSLQLVILE---------------------ISLSECSISDYQQTPAHSSQNDPTDVNNSTES

Query:  SMQNLMSSTYVAKNHPPNAIIGDARSDITTQKKEQSDYAKMVANVCFTSTMEPTTVTDALKDDQWILAMQQKLLQFERNQV
        SMQ +MS T++AKNHP ++IIG+  S ITT+KKE+ DYAKMVANVC+TST+EPTTVT AL D+ WIL MQ++LLQFERNQV
Subjt:  SMQNLMSSTYVAKNHPPNAIIGDARSDITTQKKEQSDYAKMVANVCFTSTMEPTTVTDALKDDQWILAMQQKLLQFERNQV

KAA0049939.1 gag-pol polyprotein [Cucumis melo var. makuwa]9.58e-103100Show/hide
Query:  MESINVIVDDYSQTTKSRLDEEDGFFWADKSQAIRLTRLSLQLVILEISLSECSISDYQQTPAHSSQNDPTDVNNSTESSMQNLMSSTYVAKNHPPNAII
        MESINVIVDDYSQTTKSRLDEEDGFFWADKSQAIRLTRLSLQLVILEISLSECSISDYQQTPAHSSQNDPTDVNNSTESSMQNLMSSTYVAKNHPPNAII
Subjt:  MESINVIVDDYSQTTKSRLDEEDGFFWADKSQAIRLTRLSLQLVILEISLSECSISDYQQTPAHSSQNDPTDVNNSTESSMQNLMSSTYVAKNHPPNAII

Query:  GDARSDITTQKKEQSDYAKMVANVCFTSTMEPTTVTDALKDDQWILAMQQKLLQFERNQV
        GDARSDITTQKKEQSDYAKMVANVCFTSTMEPTTVTDALKDDQWILAMQQKLLQFERNQV
Subjt:  GDARSDITTQKKEQSDYAKMVANVCFTSTMEPTTVTDALKDDQWILAMQQKLLQFERNQV

KAA0065472.1 putative mitochondrial protein [Cucumis melo var. makuwa]1.34e-4859.04Show/hide
Query:  MESINVIVDDYSQTTKSRLDEEDGFFWADKSQAIRLT--------------RLSLQLVI----------LEISLSECSISDYQQTPAHSSQNDPTDVNNS
        ME INV +DD+ QT+KS +DEEDG FW +KSQA R T              R+S   V+          LE S SECSI DYQQT  HSSQND  D+ NS
Subjt:  MESINVIVDDYSQTTKSRLDEEDGFFWADKSQAIRLT--------------RLSLQLVI----------LEISLSECSISDYQQTPAHSSQNDPTDVNNS

Query:  TESSMQNLMSSTYVAKNHPPNAIIGDARSDITTQKKEQSDYAKMVANVCFTSTMEPTTVTDALKDD
        T+SSMQ LM ST+VAKNHP NAIIGD RS ITT+KK+Q  Y KMVANVC+TSTME  T+TDAL DD
Subjt:  TESSMQNLMSSTYVAKNHPPNAIIGDARSDITTQKKEQSDYAKMVANVCFTSTMEPTTVTDALKDD

TYK29845.1 flocculation protein FLO11-like [Cucumis melo var. makuwa]5.24e-3948.62Show/hide
Query:  MESINVIVDDYSQTTKSRLDEEDGFFWADKSQAIRLTRLSLQLVILE---------------------ISLSECSISDYQQTPAHSSQNDPTDVNNSTES
        MESINVI+D   +  K  LDEEDG FW   SQ  + TR  +  +  E                     +S SE   S    T    +    T+  +ST+S
Subjt:  MESINVIVDDYSQTTKSRLDEEDGFFWADKSQAIRLTRLSLQLVILE---------------------ISLSECSISDYQQTPAHSSQNDPTDVNNSTES

Query:  SMQNLMSSTYVAKNHPPNAIIGDARSDITTQKKEQSDYAKMVANVCFTSTMEPTTVTDALKDDQWILAMQQKLLQFERNQV
        SMQ +MS T++AKNHP ++IIG+  S ITT+KKE+ DYAKMVANVC+TST+EPTTVT AL D+ WIL MQ++LLQFERNQV
Subjt:  SMQNLMSSTYVAKNHPPNAIIGDARSDITTQKKEQSDYAKMVANVCFTSTMEPTTVTDALKDDQWILAMQQKLLQFERNQV

TrEMBL top hitse value%identityAlignment
A0A5A7SVT6 Gag-pol polyprotein1.5e-3045.41Show/hide
Query:  MESINVIVDDYSQTTKSRLDEEDGFFWA------------------DKSQAIRLTRLSLQLVILE--------ISLSECSISDYQQTPAHSSQNDPTDVN
        MES+NVI+DD+ +     +DEEDG  WA                  DK  +   + ++   V++E         S SE S+S+ QQT  +S       + 
Subjt:  MESINVIVDDYSQTTKSRLDEEDGFFWA------------------DKSQAIRLTRLSLQLVILE--------ISLSECSISDYQQTPAHSSQNDPTDVN

Query:  NSTESSMQNLMSSTYVAKNHPPNAIIGDARSDITTQKKEQSDYAKMVANVCFTSTMEPTTVTDALKDDQWILAMQQKLLQFERNQ
        ++  SSMQ ++  T++AKNHP ++IIGD  S ITTQKKE+  Y+KMVANVC+TST+EPTTVT AL D+ WILAMQ++LLQFERNQ
Subjt:  NSTESSMQNLMSSTYVAKNHPPNAIIGDARSDITTQKKEQSDYAKMVANVCFTSTMEPTTVTDALKDDQWILAMQQKLLQFERNQ

A0A5A7SWY8 Flocculation protein FLO11-like9.5e-3348.07Show/hide
Query:  MESINVIVDDYSQTTKSRLDEEDGFFWADKSQAIRLTRLSLQLVILE---------------------ISLSECSISDYQQTPAHSSQNDPTDVNNSTES
        MESINVI+D   +  K  LDEEDG FW   SQ  + TR  +  +  E                     +S SE   S    T    +    T+  +S +S
Subjt:  MESINVIVDDYSQTTKSRLDEEDGFFWADKSQAIRLTRLSLQLVILE---------------------ISLSECSISDYQQTPAHSSQNDPTDVNNSTES

Query:  SMQNLMSSTYVAKNHPPNAIIGDARSDITTQKKEQSDYAKMVANVCFTSTMEPTTVTDALKDDQWILAMQQKLLQFERNQV
        SMQ +MS T++AKNHP ++IIG+  S ITT+KKE+ DYAKMVANVC+TST+EPTTVT AL D+ WIL MQ++LLQFERNQV
Subjt:  SMQNLMSSTYVAKNHPPNAIIGDARSDITTQKKEQSDYAKMVANVCFTSTMEPTTVTDALKDDQWILAMQQKLLQFERNQV

A0A5A7VAZ1 Putative mitochondrial protein4.9e-3759.04Show/hide
Query:  MESINVIVDDYSQTTKSRLDEEDGFFWADKSQAIRLT--------------RLSLQLVI----------LEISLSECSISDYQQTPAHSSQNDPTDVNNS
        ME INV +DD+ QT+KS +DEEDG FW +KSQA R T              R+S   V+          LE S SECSI DYQQT  HSSQND  D+ NS
Subjt:  MESINVIVDDYSQTTKSRLDEEDGFFWADKSQAIRLT--------------RLSLQLVI----------LEISLSECSISDYQQTPAHSSQNDPTDVNNS

Query:  TESSMQNLMSSTYVAKNHPPNAIIGDARSDITTQKKEQSDYAKMVANVCFTSTMEPTTVTDALKDD
        T+SSMQ LM ST+VAKNHP NAIIGD RS ITT+KK+Q  Y KMVANVC+TSTME  T+TDAL DD
Subjt:  TESSMQNLMSSTYVAKNHPPNAIIGDARSDITTQKKEQSDYAKMVANVCFTSTMEPTTVTDALKDD

A0A5D3C707 Gag-pol polyprotein1.2e-80100Show/hide
Query:  MESINVIVDDYSQTTKSRLDEEDGFFWADKSQAIRLTRLSLQLVILEISLSECSISDYQQTPAHSSQNDPTDVNNSTESSMQNLMSSTYVAKNHPPNAII
        MESINVIVDDYSQTTKSRLDEEDGFFWADKSQAIRLTRLSLQLVILEISLSECSISDYQQTPAHSSQNDPTDVNNSTESSMQNLMSSTYVAKNHPPNAII
Subjt:  MESINVIVDDYSQTTKSRLDEEDGFFWADKSQAIRLTRLSLQLVILEISLSECSISDYQQTPAHSSQNDPTDVNNSTESSMQNLMSSTYVAKNHPPNAII

Query:  GDARSDITTQKKEQSDYAKMVANVCFTSTMEPTTVTDALKDDQWILAMQQKLLQFERNQV
        GDARSDITTQKKEQSDYAKMVANVCFTSTMEPTTVTDALKDDQWILAMQQKLLQFERNQV
Subjt:  GDARSDITTQKKEQSDYAKMVANVCFTSTMEPTTVTDALKDDQWILAMQQKLLQFERNQV

A0A5D3E3G2 Flocculation protein FLO11-like3.3e-3348.62Show/hide
Query:  MESINVIVDDYSQTTKSRLDEEDGFFWADKSQAIRLTRLSLQLVILE---------------------ISLSECSISDYQQTPAHSSQNDPTDVNNSTES
        MESINVI+D   +  K  LDEEDG FW   SQ  + TR  +  +  E                     +S SE   S    T    +    T+  +ST+S
Subjt:  MESINVIVDDYSQTTKSRLDEEDGFFWADKSQAIRLTRLSLQLVILE---------------------ISLSECSISDYQQTPAHSSQNDPTDVNNSTES

Query:  SMQNLMSSTYVAKNHPPNAIIGDARSDITTQKKEQSDYAKMVANVCFTSTMEPTTVTDALKDDQWILAMQQKLLQFERNQV
        SMQ +MS T++AKNHP ++IIG+  S ITT+KKE+ DYAKMVANVC+TST+EPTTVT AL D+ WIL MQ++LLQFERNQV
Subjt:  SMQNLMSSTYVAKNHPPNAIIGDARSDITTQKKEQSDYAKMVANVCFTSTMEPTTVTDALKDDQWILAMQQKLLQFERNQV

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGAATCAATCAATGTTATTGTTGATGATTACAGCCAAACAACTAAGAGTCGTTTAGATGAAGAAGATGGATTCTTCTGGGCAGACAAGTCTCAAGCTATCAGACTTAC
TCGACTGTCACTCCAGTTGGTCATCCTTGAGATCAGCTTAAGTGAATGTTCTATATCTGACTATCAACAGACACCAGCACATTCCTCTCAGAATGATCCTACAGATGTAA
ATAACTCTACTGAGTCTTCCATGCAGAACTTGATGTCCTCCACCTATGTAGCTAAAAATCATCCTCCCAATGCTATTATTGGGGATGCCAGAAGCGACATTACCACACAA
AAGAAGGAACAAAGTGACTATGCAAAAATGGTTGCAAATGTGTGTTTTACTTCCACAATGGAACCTACTACAGTCACCGATGCCCTCAAGGATGATCAATGGATCCTGGC
CATGCAACAAAAACTTCTGCAATTTGAGAGAAATCAAGTCTAA
mRNA sequenceShow/hide mRNA sequence
ATGGAATCAATCAATGTTATTGTTGATGATTACAGCCAAACAACTAAGAGTCGTTTAGATGAAGAAGATGGATTCTTCTGGGCAGACAAGTCTCAAGCTATCAGACTTAC
TCGACTGTCACTCCAGTTGGTCATCCTTGAGATCAGCTTAAGTGAATGTTCTATATCTGACTATCAACAGACACCAGCACATTCCTCTCAGAATGATCCTACAGATGTAA
ATAACTCTACTGAGTCTTCCATGCAGAACTTGATGTCCTCCACCTATGTAGCTAAAAATCATCCTCCCAATGCTATTATTGGGGATGCCAGAAGCGACATTACCACACAA
AAGAAGGAACAAAGTGACTATGCAAAAATGGTTGCAAATGTGTGTTTTACTTCCACAATGGAACCTACTACAGTCACCGATGCCCTCAAGGATGATCAATGGATCCTGGC
CATGCAACAAAAACTTCTGCAATTTGAGAGAAATCAAGTCTAA
Protein sequenceShow/hide protein sequence
MESINVIVDDYSQTTKSRLDEEDGFFWADKSQAIRLTRLSLQLVILEISLSECSISDYQQTPAHSSQNDPTDVNNSTESSMQNLMSSTYVAKNHPPNAIIGDARSDITTQ
KKEQSDYAKMVANVCFTSTMEPTTVTDALKDDQWILAMQQKLLQFERNQV