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IVF0019147 (gene) of Melon (IVF77) v1 genome

Gene IDIVF0019147
OrganismCucumis melo ssp. agrestis cv. IVF77 (Melon (IVF77) v1)
DescriptionRetrotransposon protein
Genome locationchr12:15563994..15564299
RNA-Seq ExpressionIVF0019147
SyntenyIVF0019147
Gene Ontology termsGO:0046872 - metal ion binding (molecular function)
InterPro domainsIPR027806 - Harbinger transposase-derived nuclease domain


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0041589.1 retrotransposon protein [Cucumis melo var. makuwa]4.15e-6191.09Show/hide
Query:  MKHSSARNVIERAFGVLKGRWAILHGKSYYPLQIQCSTILACVLLHNLINRKMTYCDDVDDEDEGDSTYATTTASEDIQYIETTNEWSQWRDDLAESMFT
        MKHSSARNVIERAFGVLKGRWAIL GKSYYPLQ+QC TILAC LLHNLINR+MTYCDDV+DEDEGDSTYATTTASEDIQYIETTNEWSQWRD+LA SMFT
Subjt:  MKHSSARNVIERAFGVLKGRWAILHGKSYYPLQIQCSTILACVLLHNLINRKMTYCDDVDDEDEGDSTYATTTASEDIQYIETTNEWSQWRDDLAESMFT

Query:  E
        +
Subjt:  E
KAA0054289.1 retrotransposon protein [Cucumis melo var. makuwa]2.63e-64100Show/hide
Query:  MKHSSARNVIERAFGVLKGRWAILHGKSYYPLQIQCSTILACVLLHNLINRKMTYCDDVDDEDEGDSTYATTTASEDIQYIETTNEWSQWRDDLAESMFT
        MKHSSARNVIERAFGVLKGRWAILHGKSYYPLQIQCSTILACVLLHNLINRKMTYCDDVDDEDEGDSTYATTTASEDIQYIETTNEWSQWRDDLAESMFT
Subjt:  MKHSSARNVIERAFGVLKGRWAILHGKSYYPLQIQCSTILACVLLHNLINRKMTYCDDVDDEDEGDSTYATTTASEDIQYIETTNEWSQWRDDLAESMFT

Query:  E
        E
Subjt:  E
KAA0058871.1 retrotransposon protein [Cucumis melo var. makuwa]4.25e-6190.1Show/hide
Query:  MKHSSARNVIERAFGVLKGRWAILHGKSYYPLQIQCSTILACVLLHNLINRKMTYCDDVDDEDEGDSTYATTTASEDIQYIETTNEWSQWRDDLAESMFT
        MKHSS RNVIERAFGVLKGRW IL G SYYPLQ+QC TILAC LLHNLINR+MTYC+DVDDEDEGDSTY TTTASEDIQYIETTNEWSQWRDDLAESMFT
Subjt:  MKHSSARNVIERAFGVLKGRWAILHGKSYYPLQIQCSTILACVLLHNLINRKMTYCDDVDDEDEGDSTYATTTASEDIQYIETTNEWSQWRDDLAESMFT

Query:  E
        E
Subjt:  E
KAA0062284.1 retrotransposon protein [Cucumis melo var. makuwa]3.23e-6595.05Show/hide
Query:  MKHSSARNVIERAFGVLKGRWAILHGKSYYPLQIQCSTILACVLLHNLINRKMTYCDDVDDEDEGDSTYATTTASEDIQYIETTNEWSQWRDDLAESMFT
        MKHSSARNVIERAFGVLKGRWAILHGKSYYPLQ+QC TILAC LLHNLINR+MTYCDD+DDEDEGDSTYATTTASEDIQYIETTNEWSQWRDDLAESMFT
Subjt:  MKHSSARNVIERAFGVLKGRWAILHGKSYYPLQIQCSTILACVLLHNLINRKMTYCDDVDDEDEGDSTYATTTASEDIQYIETTNEWSQWRDDLAESMFT

Query:  E
        E
Subjt:  E
TYK11987.1 retrotransposon protein [Cucumis melo var. makuwa]8.92e-6393.07Show/hide
Query:  MKHSSARNVIERAFGVLKGRWAILHGKSYYPLQIQCSTILACVLLHNLINRKMTYCDDVDDEDEGDSTYATTTASEDIQYIETTNEWSQWRDDLAESMFT
        MKHSSARNVIERAFGVLKGRWAIL GKSYYPLQ+QC TILAC LLHNLINR+MTYC+DVDDEDEGDSTYATTTASEDIQYIETTNEWSQWR+DLAESMFT
Subjt:  MKHSSARNVIERAFGVLKGRWAILHGKSYYPLQIQCSTILACVLLHNLINRKMTYCDDVDDEDEGDSTYATTTASEDIQYIETTNEWSQWRDDLAESMFT

Query:  E
        E
Subjt:  E
TrEMBL top hitse value%identityAlignment
A0A5A7U4G2 Retrotransposon protein1.9e-4793.07Show/hide
Query:  MKHSSARNVIERAFGVLKGRWAILHGKSYYPLQIQCSTILACVLLHNLINRKMTYCDDVDDEDEGDSTYATTTASEDIQYIETTNEWSQWRDDLAESMFT
        MKHSSARNVIERAFGVLKGRWAIL GKSYYPLQ+QC TILAC LLHNLINR+MTYC+DVDDEDEGDSTYATTTASEDIQYIETTNEWSQW DDLAESMFT
Subjt:  MKHSSARNVIERAFGVLKGRWAILHGKSYYPLQIQCSTILACVLLHNLINRKMTYCDDVDDEDEGDSTYATTTASEDIQYIETTNEWSQWRDDLAESMFT

Query:  E
        E
Subjt:  E
A0A5A7UG16 Retrotransposon protein1.5e-4793.07Show/hide
Query:  MKHSSARNVIERAFGVLKGRWAILHGKSYYPLQIQCSTILACVLLHNLINRKMTYCDDVDDEDEGDSTYATTTASEDIQYIETTNEWSQWRDDLAESMFT
        MKHSS RNVIERAFGVLKGRWAIL GKSYYPLQ+QC TILAC LLHNLINR+MTYCDDV+DEDEGDSTYATTTASEDIQYIETTNEWSQWRDDLAESMFT
Subjt:  MKHSSARNVIERAFGVLKGRWAILHGKSYYPLQIQCSTILACVLLHNLINRKMTYCDDVDDEDEGDSTYATTTASEDIQYIETTNEWSQWRDDLAESMFT

Query:  E
        E
Subjt:  E
A0A5A7ULE8 Retrotransposon protein4.9e-51100Show/hide
Query:  MKHSSARNVIERAFGVLKGRWAILHGKSYYPLQIQCSTILACVLLHNLINRKMTYCDDVDDEDEGDSTYATTTASEDIQYIETTNEWSQWRDDLAESMFT
        MKHSSARNVIERAFGVLKGRWAILHGKSYYPLQIQCSTILACVLLHNLINRKMTYCDDVDDEDEGDSTYATTTASEDIQYIETTNEWSQWRDDLAESMFT
Subjt:  MKHSSARNVIERAFGVLKGRWAILHGKSYYPLQIQCSTILACVLLHNLINRKMTYCDDVDDEDEGDSTYATTTASEDIQYIETTNEWSQWRDDLAESMFT

Query:  E
        E
Subjt:  E
A0A5A7V4Q8 Retrotransposon protein3.5e-4995.05Show/hide
Query:  MKHSSARNVIERAFGVLKGRWAILHGKSYYPLQIQCSTILACVLLHNLINRKMTYCDDVDDEDEGDSTYATTTASEDIQYIETTNEWSQWRDDLAESMFT
        MKHSSARNVIERAFGVLKGRWAILHGKSYYPLQ+QC TILAC LLHNLINR+MTYCDD+DDEDEGDSTYATTTASEDIQYIETTNEWSQWRDDLAESMFT
Subjt:  MKHSSARNVIERAFGVLKGRWAILHGKSYYPLQIQCSTILACVLLHNLINRKMTYCDDVDDEDEGDSTYATTTASEDIQYIETTNEWSQWRDDLAESMFT

Query:  E
        E
Subjt:  E
A0A5A7V738 Retrotransposon protein3.9e-4894.06Show/hide
Query:  MKHSSARNVIERAFGVLKGRWAILHGKSYYPLQIQCSTILACVLLHNLINRKMTYCDDVDDEDEGDSTYATTTASEDIQYIETTNEWSQWRDDLAESMFT
        MKHSSARNVI+RAFGVLKGRWAIL GKSYYPLQ+QC TILAC LLHNLINRKMTYCDDV+DEDEGDSTYATTTASEDIQYIETTNEWSQWRDDLAESMFT
Subjt:  MKHSSARNVIERAFGVLKGRWAILHGKSYYPLQIQCSTILACVLLHNLINRKMTYCDDVDDEDEGDSTYATTTASEDIQYIETTNEWSQWRDDLAESMFT

Query:  E
        E
Subjt:  E
SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
AT5G12010.1 unknown protein4.4e-0442.55Show/hide
Query:  KHSSARNVIERAFGVLKGRWAILHGKSYYPLQIQCSTILACVLLHNL
        K S  + V + AFG LKGRWA L  ++   LQ   + + AC +LHN+
Subjt:  KHSSARNVIERAFGVLKGRWAILHGKSYYPLQIQCSTILACVLLHNL
AT5G35695.1 CONTAINS InterPro DOMAIN/s: Putative harbinger transposase-derived nuclease (InterPro:IPR006912)1.2e-0630.7Show/hide
Query:  MKHSSARNVIERAFGVLKGRWAILHGKSYYPLQIQCSTILACVLLHNLINRKMTYCDDVDDEDE-GDSTYATTTASEDIQYIETTNE------------W
        ++H S RNVIER FG+ K R+AI      +  + Q   +L C  LHN + RK    D+ D  DE G+           +   E  NE             
Subjt:  MKHSSARNVIERAFGVLKGRWAILHGKSYYPLQIQCSTILACVLLHNLINRKMTYCDDVDDEDE-GDSTYATTTASEDIQYIETTNE------------W

Query:  SQWRDDLAESMFTE
        + WR  +AE M+ +
Subjt:  SQWRDDLAESMFTE

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGAAGCACTCCTCCGCAAGGAATGTTATTGAGCGCGCGTTCGGTGTTCTCAAGGGTCGTTGGGCCATTCTTCATGGAAAGTCGTACTATCCCCTGCAAATCCAGTGTAG
CACCATTCTAGCATGTGTCTTACTTCACAATTTGATCAACAGAAAAATGACATATTGCGACGACGTTGACGACGAGGACGAGGGGGACTCCACGTACGCGACGACCACCG
CTTCAGAAGACATTCAGTACATTGAGACAACAAACGAGTGGTCTCAGTGGCGCGACGACCTAGCCGAATCGATGTTCACCGAATGA
mRNA sequenceShow/hide mRNA sequence
ATGAAGCACTCCTCCGCAAGGAATGTTATTGAGCGCGCGTTCGGTGTTCTCAAGGGTCGTTGGGCCATTCTTCATGGAAAGTCGTACTATCCCCTGCAAATCCAGTGTAG
CACCATTCTAGCATGTGTCTTACTTCACAATTTGATCAACAGAAAAATGACATATTGCGACGACGTTGACGACGAGGACGAGGGGGACTCCACGTACGCGACGACCACCG
CTTCAGAAGACATTCAGTACATTGAGACAACAAACGAGTGGTCTCAGTGGCGCGACGACCTAGCCGAATCGATGTTCACCGAATGA
Protein sequenceShow/hide protein sequence
MKHSSARNVIERAFGVLKGRWAILHGKSYYPLQIQCSTILACVLLHNLINRKMTYCDDVDDEDEGDSTYATTTASEDIQYIETTNEWSQWRDDLAESMFTE