; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

IVF0019185 (gene) of Melon (IVF77) v1 genome

Gene IDIVF0019185
OrganismCucumis melo ssp. agrestis cv. IVF77 (Melon (IVF77) v1)
DescriptionTransposon Ty3-I Gag-Pol polyprotein
Genome locationchr12:7861238..7861423
RNA-Seq ExpressionIVF0019185
SyntenyIVF0019185
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0026294.1 cytochrome b561 and DOMON domain-containing protein [Cucumis melo var. makuwa]1.08e-0775Show/hide
Query:  MANACKEEFGDNLHLGEITFIICVPKREQVWI
        MANACKE+FGD L+L +IT IICVPK EQVW+
Subjt:  MANACKEEFGDNLHLGEITFIICVPKREQVWI
KAA0032002.1 Transposon Ty3-I Gag-Pol polyprotein [Cucumis melo var. makuwa]7.62e-0767.74Show/hide
Query:  NACKEEFGDNLHLGEITFIICVPKREQVWIL
        N C+EEFGDNLH G+IT IIC P+R QVW +
Subjt:  NACKEEFGDNLHLGEITFIICVPKREQVWIL
KAA0051792.1 hypothetical protein E6C27_scaffold60G002010 [Cucumis melo var. makuwa]2.40e-0677.42Show/hide
Query:  MANACKEEFGDNLHLGEITFIICVPKREQVW
        M NA KEEFGD LHLG IT IICV K EQVW
Subjt:  MANACKEEFGDNLHLGEITFIICVPKREQVW
TYK07860.1 uncharacterized protein E5676_scaffold1933G00010 [Cucumis melo var. makuwa]9.64e-0756.6Show/hide
Query:  MANACKEEFGDNLHLGEITFIICVPKREQVWILSLGSFKNAKLRKDLKELNYK
        MAN CKEEF   LH+ EIT I CVPK EQVW+LS      A+    LKE  YK
Subjt:  MANACKEEFGDNLHLGEITFIICVPKREQVWILSLGSFKNAKLRKDLKELNYK
TYK21449.1 hypothetical protein E5676_scaffold609G001190 [Cucumis melo var. makuwa]1.96e-0677.42Show/hide
Query:  MANACKEEFGDNLHLGEITFIICVPKREQVW
        M NA KEEFGD LHLG IT IICV K EQVW
Subjt:  MANACKEEFGDNLHLGEITFIICVPKREQVW
TrEMBL top hitse value%identityAlignment
A0A5A7U7Q4 Uncharacterized protein6.0e-0477.42Show/hide
Query:  MANACKEEFGDNLHLGEITFIICVPKREQVW
        M NA KEEFGD LHLG IT IICV K EQVW
Subjt:  MANACKEEFGDNLHLGEITFIICVPKREQVW
A0A5D3C951 Uncharacterized protein7.1e-0556.6Show/hide
Query:  MANACKEEFGDNLHLGEITFIICVPKREQVWILSLGSFKNAKLRKDLKELNYK
        MAN CKEEF   LH+ EIT I CVPK EQVW+LS      A+    LKE  YK
Subjt:  MANACKEEFGDNLHLGEITFIICVPKREQVWILSLGSFKNAKLRKDLKELNYK
A0A5D3CY29 Transposon Ty3-I Gag-Pol polyprotein2.1e-0467.74Show/hide
Query:  NACKEEFGDNLHLGEITFIICVPKREQVWIL
        N C+EEFGDNLH G+IT IIC P+R QVW +
Subjt:  NACKEEFGDNLHLGEITFIICVPKREQVWIL
A0A5D3DDG5 Cytochrome b561 and DOMON domain-containing protein1.1e-0575Show/hide
Query:  MANACKEEFGDNLHLGEITFIICVPKREQVWI
        MANACKE+FGD L+L +IT IICVPK EQVW+
Subjt:  MANACKEEFGDNLHLGEITFIICVPKREQVWI
A0A5D3DDR8 Uncharacterized protein6.0e-0477.42Show/hide
Query:  MANACKEEFGDNLHLGEITFIICVPKREQVW
        M NA KEEFGD LHLG IT IICV K EQVW
Subjt:  MANACKEEFGDNLHLGEITFIICVPKREQVW
SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGCTAATGCATGCAAGGAAGAGTTTGGAGACAACCTCCACCTTGGTGAGATAACTTTCATCATTTGTGTCCCAAAAAGAGAACAAGTATGGATACTAAGTCTTGGATC
ATTCAAGAATGCAAAACTACGCAAGGATCTCAAAGAATTAAACTACAAACACCCAAATTCTCCAAGTTTAGCTTAG
mRNA sequenceShow/hide mRNA sequence
ATGGCTAATGCATGCAAGGAAGAGTTTGGAGACAACCTCCACCTTGGTGAGATAACTTTCATCATTTGTGTCCCAAAAAGAGAACAAGTATGGATACTAAGTCTTGGATC
ATTCAAGAATGCAAAACTACGCAAGGATCTCAAAGAATTAAACTACAAACACCCAAATTCTCCAAGTTTAGCTTAG
Protein sequenceShow/hide protein sequence
MANACKEEFGDNLHLGEITFIICVPKREQVWILSLGSFKNAKLRKDLKELNYKHPNSPSLA