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IVF0019201 (gene) of Melon (IVF77) v1 genome

Gene IDIVF0019201
OrganismCucumis melo ssp. agrestis cv. IVF77 (Melon (IVF77) v1)
DescriptionGag-pol polyprotein
Genome locationchr11:4468224..4468750
RNA-Seq ExpressionIVF0019201
SyntenyIVF0019201
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0045970.1 gag-pol polyprotein [Cucumis melo var. makuwa]2.51e-6497.25Show/hide
Query:  SSTRATSPLQAFSPITPSSPQLPEDTFEINEVKSGEDTDDDYIPAPEDTPVPEETLVPNVTPIPSCVNQTPKPPTSDVPRASTIIFRLWVMLAPHPRDLE
        SSTRATSPLQAFSPITPSSPQ PEDTFEINEVKSGEDTDDDYIPAPEDTPVPEETLVPNVTPIPSCVNQTPKPPTS+VPRASTIIFRLWVMLA HPRDLE
Subjt:  SSTRATSPLQAFSPITPSSPQLPEDTFEINEVKSGEDTDDDYIPAPEDTPVPEETLVPNVTPIPSCVNQTPKPPTSDVPRASTIIFRLWVMLAPHPRDLE

Query:  DLLLEGKGL
        DLLLEGKGL
Subjt:  DLLLEGKGL

KAA0049940.1 flocculation protein FLO11-like [Cucumis melo var. makuwa]2.69e-1151.16Show/hide
Query:  GLGSSTRATSPLQAFSPITPSSPQLPEDTFEINEVKSGEDTDDDYIPAPEDTPVPEETLVPNVTPIPSCVNQTPKPPTSDVPRAST
        G+ S TRA SPL      T S     ED+F+ +EV+S ED DDDYIPAP++T VPEET VPN+T   S  N+T +PP  +V R  T
Subjt:  GLGSSTRATSPLQAFSPITPSSPQLPEDTFEINEVKSGEDTDDDYIPAPEDTPVPEETLVPNVTPIPSCVNQTPKPPTSDVPRAST

KAA0061207.1 flocculation protein FLO11-like [Cucumis melo var. makuwa]7.24e-0749.28Show/hide
Query:  AFSPITPSSPQLPEDTFEINEVKSGEDTDDDYIPAPEDTPVPEETLVPNVTPIPSCVNQTPKPPTSDVP
        A S +T SS Q  ED++E +E + GE+ DDDY+   ++T VPEET VP+V   PSCVN T +P ++ VP
Subjt:  AFSPITPSSPQLPEDTFEINEVKSGEDTDDDYIPAPEDTPVPEETLVPNVTPIPSCVNQTPKPPTSDVP

TYK00112.1 flocculation protein FLO11-like [Cucumis melo var. makuwa]4.08e-1151.81Show/hide
Query:  STRATSPL-QAFSPITPSSPQLPEDTFEINEVKSGEDTDDDYIPAPEDTPVPEETLVPNVTPIPSCVNQTPKPPTSDVPRAST
        S    SP+ QA S +TPSSPQ  ED ++ +E +SGEDTDDDY+  PE+T VP+ET VP+     S VN+T +P  + VPR ST
Subjt:  STRATSPL-QAFSPITPSSPQLPEDTFEINEVKSGEDTDDDYIPAPEDTPVPEETLVPNVTPIPSCVNQTPKPPTSDVPRAST

TYK13615.1 gag-pol polyprotein [Cucumis melo var. makuwa]7.16e-67100Show/hide
Query:  SSTRATSPLQAFSPITPSSPQLPEDTFEINEVKSGEDTDDDYIPAPEDTPVPEETLVPNVTPIPSCVNQTPKPPTSDVPRASTIIFRLWVMLAPHPRDLE
        SSTRATSPLQAFSPITPSSPQLPEDTFEINEVKSGEDTDDDYIPAPEDTPVPEETLVPNVTPIPSCVNQTPKPPTSDVPRASTIIFRLWVMLAPHPRDLE
Subjt:  SSTRATSPLQAFSPITPSSPQLPEDTFEINEVKSGEDTDDDYIPAPEDTPVPEETLVPNVTPIPSCVNQTPKPPTSDVPRASTIIFRLWVMLAPHPRDLE

Query:  DLLLEGKGL
        DLLLEGKGL
Subjt:  DLLLEGKGL

TrEMBL top hitse value%identityAlignment
A0A5A7TS44 Gag-pol polyprotein1.3e-5197.25Show/hide
Query:  SSTRATSPLQAFSPITPSSPQLPEDTFEINEVKSGEDTDDDYIPAPEDTPVPEETLVPNVTPIPSCVNQTPKPPTSDVPRASTIIFRLWVMLAPHPRDLE
        SSTRATSPLQAFSPITPSSPQ PEDTFEINEVKSGEDTDDDYIPAPEDTPVPEETLVPNVTPIPSCVNQTPKPPTS+VPRASTIIFRLWVMLA HPRDLE
Subjt:  SSTRATSPLQAFSPITPSSPQLPEDTFEINEVKSGEDTDDDYIPAPEDTPVPEETLVPNVTPIPSCVNQTPKPPTSDVPRASTIIFRLWVMLAPHPRDLE

Query:  DLLLEGKGL
        DLLLEGKGL
Subjt:  DLLLEGKGL

A0A5A7U3T5 Flocculation protein FLO11-like3.5e-0951.16Show/hide
Query:  GLGSSTRATSPLQAFSPITPSSPQLPEDTFEINEVKSGEDTDDDYIPAPEDTPVPEETLVPNVTPIPSCVNQTPKPPTSDVPRAST
        G+ S TRA SPL      T S     ED+F+ +EV+S ED DDDYIPAP++T VPEET VPN+T   S  N+T +PP  +V R  T
Subjt:  GLGSSTRATSPLQAFSPITPSSPQLPEDTFEINEVKSGEDTDDDYIPAPEDTPVPEETLVPNVTPIPSCVNQTPKPPTSDVPRAST

A0A5A7V2V5 Flocculation protein FLO11-like1.8e-0542.53Show/hide
Query:  PRLLWGLGSSTRATSPLQAFSPITPSSPQLPEDTFEINEVKSGEDTDDDYIPAPEDTPVPEETLVPNVTPIPSCVNQTPKPPTSDVP
        PR ++   ++   +S   A S +T SS Q  ED++E +E + GE+ DDDY+   ++T VPEET VP+V   PSCVN T +P ++ VP
Subjt:  PRLLWGLGSSTRATSPLQAFSPITPSSPQLPEDTFEINEVKSGEDTDDDYIPAPEDTPVPEETLVPNVTPIPSCVNQTPKPPTSDVP

A0A5D3BN12 Flocculation protein FLO11-like5.9e-0951.81Show/hide
Query:  STRATSPL-QAFSPITPSSPQLPEDTFEINEVKSGEDTDDDYIPAPEDTPVPEETLVPNVTPIPSCVNQTPKPPTSDVPRAST
        S    SP+ QA S +TPSSPQ  ED ++ +E +SGEDTDDDY+  PE+T VP+ET VP+     S VN+T +P  + VPR ST
Subjt:  STRATSPL-QAFSPITPSSPQLPEDTFEINEVKSGEDTDDDYIPAPEDTPVPEETLVPNVTPIPSCVNQTPKPPTSDVPRAST

A0A5D3CPZ4 Gag-pol polyprotein7.9e-54100Show/hide
Query:  SSTRATSPLQAFSPITPSSPQLPEDTFEINEVKSGEDTDDDYIPAPEDTPVPEETLVPNVTPIPSCVNQTPKPPTSDVPRASTIIFRLWVMLAPHPRDLE
        SSTRATSPLQAFSPITPSSPQLPEDTFEINEVKSGEDTDDDYIPAPEDTPVPEETLVPNVTPIPSCVNQTPKPPTSDVPRASTIIFRLWVMLAPHPRDLE
Subjt:  SSTRATSPLQAFSPITPSSPQLPEDTFEINEVKSGEDTDDDYIPAPEDTPVPEETLVPNVTPIPSCVNQTPKPPTSDVPRASTIIFRLWVMLAPHPRDLE

Query:  DLLLEGKGL
        DLLLEGKGL
Subjt:  DLLLEGKGL

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGCCTCTCCTCCTCGATAAACCCAGCCATCTGCTTCCTCGTCTACTTTGGGGTCTAGGTTCATCGACTCGTGCAACTTCTCCCCTTCAAGCTTTCTCTCCTATTACTCC
ATCGTCTCCTCAATTGCCAGAAGATACATTTGAAATTAATGAGGTTAAGTCAGGTGAGGATACTGATGATGACTACATTCCTGCTCCCGAGGATACACCTGTTCCAGAAG
AAACCCTTGTTCCAAACGTTACCCCTATTCCATCTTGTGTGAACCAGACGCCTAAGCCTCCTACGTCTGATGTTCCTAGAGCCTCGACCATCATATTCCGTCTCTGGGTC
ATGTTGGCTCCTCATCCTAGGGACCTCGAAGACCTTTTGCTTGAAGGCAAAGGGTTGTGA
mRNA sequenceShow/hide mRNA sequence
ATGCCTCTCCTCCTCGATAAACCCAGCCATCTGCTTCCTCGTCTACTTTGGGGTCTAGGTTCATCGACTCGTGCAACTTCTCCCCTTCAAGCTTTCTCTCCTATTACTCC
ATCGTCTCCTCAATTGCCAGAAGATACATTTGAAATTAATGAGGTTAAGTCAGGTGAGGATACTGATGATGACTACATTCCTGCTCCCGAGGATACACCTGTTCCAGAAG
AAACCCTTGTTCCAAACGTTACCCCTATTCCATCTTGTGTGAACCAGACGCCTAAGCCTCCTACGTCTGATGTTCCTAGAGCCTCGACCATCATATTCCGTCTCTGGGTC
ATGTTGGCTCCTCATCCTAGGGACCTCGAAGACCTTTTGCTTGAAGGCAAAGGGTTGTGA
Protein sequenceShow/hide protein sequence
MPLLLDKPSHLLPRLLWGLGSSTRATSPLQAFSPITPSSPQLPEDTFEINEVKSGEDTDDDYIPAPEDTPVPEETLVPNVTPIPSCVNQTPKPPTSDVPRASTIIFRLWV
MLAPHPRDLEDLLLEGKGL