; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

IVF0019221 (gene) of Melon (IVF77) v1 genome

Gene IDIVF0019221
OrganismCucumis melo ssp. agrestis cv. IVF77 (Melon (IVF77) v1)
DescriptionGag-pol polyprotein
Genome locationchr05:17367394..17367804
RNA-Seq ExpressionIVF0019221
SyntenyIVF0019221
Gene Ontology termsGO:0015074 - DNA integration (biological process)
GO:0003676 - nucleic acid binding (molecular function)
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0035266.1 putative mitochondrial protein [Cucumis melo var. makuwa]3.21e-3161.96Show/hide
Query:  SSKSIYKEVMSNEEGNVPSSHVQKNYLSSSIIGDPSVGIITRKNDKIDYAKLMANICYTSSIEPTSLEEALKDDFWINGMHEELLQFHRNNV
        SSKS  +E  + E   +PSSHV+KN+ SSSIIGDP  GI TRK DK+DY K+   +CYTS+IEPTS++ ALKD++WIN M E+LLQF RNNV
Subjt:  SSKSIYKEVMSNEEGNVPSSHVQKNYLSSSIIGDPSVGIITRKNDKIDYAKLMANICYTSSIEPTSLEEALKDDFWINGMHEELLQFHRNNV

KAA0051491.1 putative mitochondrial protein [Cucumis melo var. makuwa]2.35e-3267.74Show/hide
Query:  NSSKSIYKEVMSNEEGNVPSSHVQKNYLSSSIIGDPSVGIITRKNDKIDYAKLMANICYTSSIEPTSLEEALKDDFWINGMHEELLQFHRNNV
        +SSKS  KEVM +    +PSSHV++N+ SSSIIGDPS GI T+K DKIDYAK++ +ICYTSSIEPTS  EA KD+F IN M EELLQF RNNV
Subjt:  NSSKSIYKEVMSNEEGNVPSSHVQKNYLSSSIIGDPSVGIITRKNDKIDYAKLMANICYTSSIEPTSLEEALKDDFWINGMHEELLQFHRNNV

KAA0051617.1 putative mitochondrial protein [Cucumis melo var. makuwa]3.58e-3277.63Show/hide
Query:  VPSSHVQKNYLSSSIIGDPSVGIITRKNDKIDYAKLMANICYTSSIEPTSLEEALKDDFWINGMHEELLQFHRNNV
        +P SHVQKN+ SS IIGDPS GIITR  DKIDYAK++ANICYTSSIEPTS+ EALKD+F IN M EELLQF RNNV
Subjt:  VPSSHVQKNYLSSSIIGDPSVGIITRKNDKIDYAKLMANICYTSSIEPTSLEEALKDDFWINGMHEELLQFHRNNV

TYK27718.1 putative mitochondrial protein [Cucumis melo var. makuwa]1.26e-3878.49Show/hide
Query:  NSSKSIYKEVMSNEEGNVPSSHVQKNYLSSSIIGDPSVGIITRKNDKIDYAKLMANICYTSSIEPTSLEEALKDDFWINGMHEELLQFHRNNV
        NSSKS  KEV+SNE GN PSSHV KN+ SSS IGDPS GI TRK DKIDYAKL+ANICYTSSIEPTS+ EA KDDFWIN M EELLQF RNN+
Subjt:  NSSKSIYKEVMSNEEGNVPSSHVQKNYLSSSIIGDPSVGIITRKNDKIDYAKLMANICYTSSIEPTSLEEALKDDFWINGMHEELLQFHRNNV

TYK30592.1 putative mitochondrial protein [Cucumis melo var. makuwa]1.70e-3164.13Show/hide
Query:  SSKSIYKEVMSNEEGNVPSSHVQKNYLSSSIIGDPSVGIITRKNDKIDYAKLMANICYTSSIEPTSLEEALKDDFWINGMHEELLQFHRNNV
        SSKS  KE+   E   +PSSHV+KN+ SS IIGDPSVGI TRK DK+DY K++ +ICYTS+I+PTS++ ALKD++WIN M EELLQF RN V
Subjt:  SSKSIYKEVMSNEEGNVPSSHVQKNYLSSSIIGDPSVGIITRKNDKIDYAKLMANICYTSSIEPTSLEEALKDDFWINGMHEELLQFHRNNV

TrEMBL top hitse value%identityAlignment
A0A5A7UD67 Putative mitochondrial protein3.6e-2567.74Show/hide
Query:  NSSKSIYKEVMSNEEGNVPSSHVQKNYLSSSIIGDPSVGIITRKNDKIDYAKLMANICYTSSIEPTSLEEALKDDFWINGMHEELLQFHRNNV
        +SSKS  KEVM +    +PSSHV++N+ SSSIIGDPS GI T+K DKIDYAK++ +ICYTSSIEPTS  EA KD+F IN M EELLQF RNNV
Subjt:  NSSKSIYKEVMSNEEGNVPSSHVQKNYLSSSIIGDPSVGIITRKNDKIDYAKLMANICYTSSIEPTSLEEALKDDFWINGMHEELLQFHRNNV

A0A5A7VLJ5 Gag-pol polyprotein1.8e-2460Show/hide
Query:  ATNSSKSIYKEVMSNEEGNVPSSHVQKNYLSSSIIGDPSVGIITRKNDKIDYAKLMANICYTSSIEPTSLEEALKDDFWINGMHEELLQFHRNNV
        +  +  +I  EV++NE   VPS+HV+KN+ SS IIGDPS GI TR+ +K+DY KL+A++CY S+IEPTS+E ALKD++WIN M EELLQF RNNV
Subjt:  ATNSSKSIYKEVMSNEEGNVPSSHVQKNYLSSSIIGDPSVGIITRKNDKIDYAKLMANICYTSSIEPTSLEEALKDDFWINGMHEELLQFHRNNV

A0A5D3DW56 Putative mitochondrial protein2.4e-3278.49Show/hide
Query:  NSSKSIYKEVMSNEEGNVPSSHVQKNYLSSSIIGDPSVGIITRKNDKIDYAKLMANICYTSSIEPTSLEEALKDDFWINGMHEELLQFHRNNV
        NSSKS  KEV+SNE GN PSSHV KN+ SSS IGDPS GI TRK DKIDYAKL+ANICYTSSIEPTS+ EA KDDFWIN M EELLQF RNN+
Subjt:  NSSKSIYKEVMSNEEGNVPSSHVQKNYLSSSIIGDPSVGIITRKNDKIDYAKLMANICYTSSIEPTSLEEALKDDFWINGMHEELLQFHRNNV

A0A5D3DZQ7 Gag-pol polyprotein1.1e-2455.14Show/hide
Query:  LQLVPQLILKLLATNSSKSIYKEVMSNEEGNVPSSHVQKNYLSSSIIGDPSVGIITRKNDKIDYAKLMANICYTSSIEPTSLEEALKDDFWINGMHEELL
        L  +P+  L+L +  +  +I  EV++NE   VPS+HV+KN+ SSSIIGDPS GI TR+ +K+DY K++A++CY S+++PTS+E ALKD++WIN M EELL
Subjt:  LQLVPQLILKLLATNSSKSIYKEVMSNEEGNVPSSHVQKNYLSSSIIGDPSVGIITRKNDKIDYAKLMANICYTSSIEPTSLEEALKDDFWINGMHEELL

Query:  QFHRNNV
        QF RNNV
Subjt:  QFHRNNV

A0A5D3E3W2 Putative mitochondrial protein2.1e-2564.13Show/hide
Query:  SSKSIYKEVMSNEEGNVPSSHVQKNYLSSSIIGDPSVGIITRKNDKIDYAKLMANICYTSSIEPTSLEEALKDDFWINGMHEELLQFHRNNV
        SSKS  KE+   E   +PSSHV+KN+ SS IIGDPSVGI TRK DK+DY K++ +ICYTS+I+PTS++ ALKD++WIN M EELLQF RN V
Subjt:  SSKSIYKEVMSNEEGNVPSSHVQKNYLSSSIIGDPSVGIITRKNDKIDYAKLMANICYTSSIEPTSLEEALKDDFWINGMHEELLQFHRNNV

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGATAGTCATTGTACAGACATACAAATGAAGAAGAAGAATTATTATTTCAACCATCTGTTTCTATTATCCCCTCTAAACAACTTACTACAATTGGTTCCTCAGTTAAT
ACTAAAGTTATTAGCAACAAATAGCTCCAAATCTATTTATAAAGAAGTAATGTCAAATGAAGAAGGAAATGTTCCATCTTCACATGTTCAGAAAAATTATCTTTCGAGCT
CCATCATTGGTGATCCATCTGTTGGGATTATTACCAGAAAGAATGATAAGATTGATTATGCCAAATTGATGGCTAATATTTGTTATACATCTTCTATTGAACCTACATCC
CTCGAAGAAGCCCTCAAAGATGATTTCTGGATAAATGGTATGCATGAAGAGTTATTACAATTTCATAGAAATAATGTATGA
mRNA sequenceShow/hide mRNA sequence
ATGGATAGTCATTGTACAGACATACAAATGAAGAAGAAGAATTATTATTTCAACCATCTGTTTCTATTATCCCCTCTAAACAACTTACTACAATTGGTTCCTCAGTTAAT
ACTAAAGTTATTAGCAACAAATAGCTCCAAATCTATTTATAAAGAAGTAATGTCAAATGAAGAAGGAAATGTTCCATCTTCACATGTTCAGAAAAATTATCTTTCGAGCT
CCATCATTGGTGATCCATCTGTTGGGATTATTACCAGAAAGAATGATAAGATTGATTATGCCAAATTGATGGCTAATATTTGTTATACATCTTCTATTGAACCTACATCC
CTCGAAGAAGCCCTCAAAGATGATTTCTGGATAAATGGTATGCATGAAGAGTTATTACAATTTCATAGAAATAATGTATGA
Protein sequenceShow/hide protein sequence
MDSHCTDIQMKKKNYYFNHLFLLSPLNNLLQLVPQLILKLLATNSSKSIYKEVMSNEEGNVPSSHVQKNYLSSSIIGDPSVGIITRKNDKIDYAKLMANICYTSSIEPTS
LEEALKDDFWINGMHEELLQFHRNNV