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IVF0019260 (gene) of Melon (IVF77) v1 genome

Gene IDIVF0019260
OrganismCucumis melo ssp. agrestis cv. IVF77 (Melon (IVF77) v1)
DescriptionRetrotrans_gag domain-containing protein
Genome locationchr02:9590476..9590870
RNA-Seq ExpressionIVF0019260
SyntenyIVF0019260
Gene Ontology termsGO:0008152 - metabolic process (biological process)
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0033334.1 uncharacterized protein E6C27_scaffold845G001530 [Cucumis melo var. makuwa]1.81e-1452Show/hide
Query:  TLSKSGKQFSIERLKALGATTFEGTTSPTDVEEWVNLVEKCF---------------RYEFLDLKQGNMAIAEYE
        T S   K+FSIERLK LGATTFEGTT P DVE+W+NL+EKCF               R EF+   Q +M++ EYE
Subjt:  TLSKSGKQFSIERLKALGATTFEGTTSPTDVEEWVNLVEKCF---------------RYEFLDLKQGNMAIAEYE

KAA0037861.1 hypothetical protein E6C27_scaffold36G00200 [Cucumis melo var. makuwa]1.08e-1443.02Show/hide
Query:  KGHTRSQTTTEPAVGTKAHSINQDAMIKREEALLEKV-----ELTLSKSGKQFSIERLKALGATTFEGTTSPTDVEEWVNLVEKCF
        K    S+TTT+P +  +AHS+N +A   ++EAL ++V     ++   +  K+F IE+LKALGAT F GTT+P + E+W   +EKCF
Subjt:  KGHTRSQTTTEPAVGTKAHSINQDAMIKREEALLEKV-----ELTLSKSGKQFSIERLKALGATTFEGTTSPTDVEEWVNLVEKCF

KAA0038229.1 uncharacterized protein E6C27_scaffold270G00690 [Cucumis melo var. makuwa]1.28e-58100Show/hide
Query:  MKAGYYVMPRTGKGHTRSQTTTEPAVGTKAHSINQDAMIKREEALLEKVELTLSKSGKQFSIERLKALGATTFEGTTSPTDVEEWVNLVEKCFR
        MKAGYYVMPRTGKGHTRSQTTTEPAVGTKAHSINQDAMIKREEALLEKVELTLSKSGKQFSIERLKALGATTFEGTTSPTDVEEWVNLVEKCFR
Subjt:  MKAGYYVMPRTGKGHTRSQTTTEPAVGTKAHSINQDAMIKREEALLEKVELTLSKSGKQFSIERLKALGATTFEGTTSPTDVEEWVNLVEKCFR

KAA0046246.1 Gag protease polyprotein [Cucumis melo var. makuwa]2.75e-1757.78Show/hide
Query:  KREEALLEKVELTLSKSGKQFSIERLKALGATTFEGTTSPTDVEEWVNLVEKCF----RYEFLDLK-------------QGNMAIAEYEK
        +REEALLE+V  TLSKS  QFSIERLKALGA T EGT +P DVE  VNLVEKCF    R E   +K             + +MAIAEYEK
Subjt:  KREEALLEKVELTLSKSGKQFSIERLKALGATTFEGTTSPTDVEEWVNLVEKCF----RYEFLDLK-------------QGNMAIAEYEK

TYK30624.1 uncharacterized protein E5676_scaffold84664G00390 [Cucumis melo var. makuwa]1.28e-58100Show/hide
Query:  MKAGYYVMPRTGKGHTRSQTTTEPAVGTKAHSINQDAMIKREEALLEKVELTLSKSGKQFSIERLKALGATTFEGTTSPTDVEEWVNLVEKCFR
        MKAGYYVMPRTGKGHTRSQTTTEPAVGTKAHSINQDAMIKREEALLEKVELTLSKSGKQFSIERLKALGATTFEGTTSPTDVEEWVNLVEKCFR
Subjt:  MKAGYYVMPRTGKGHTRSQTTTEPAVGTKAHSINQDAMIKREEALLEKVELTLSKSGKQFSIERLKALGATTFEGTTSPTDVEEWVNLVEKCFR

TrEMBL top hitse value%identityAlignment
A0A5A7SQ53 Retrotrans_gag domain-containing protein1.6e-1052Show/hide
Query:  TLSKSGKQFSIERLKALGATTFEGTTSPTDVEEWVNLVEKCF---------------RYEFLDLKQGNMAIAEYE
        T S   K+FSIERLK LGATTFEGTT P DVE+W+NL+EKCF               R EF+   Q +M++ EYE
Subjt:  TLSKSGKQFSIERLKALGATTFEGTTSPTDVEEWVNLVEKCF---------------RYEFLDLKQGNMAIAEYE

A0A5A7TA45 Uncharacterized protein3.8e-44100Show/hide
Query:  MKAGYYVMPRTGKGHTRSQTTTEPAVGTKAHSINQDAMIKREEALLEKVELTLSKSGKQFSIERLKALGATTFEGTTSPTDVEEWVNLVEKCFR
        MKAGYYVMPRTGKGHTRSQTTTEPAVGTKAHSINQDAMIKREEALLEKVELTLSKSGKQFSIERLKALGATTFEGTTSPTDVEEWVNLVEKCFR
Subjt:  MKAGYYVMPRTGKGHTRSQTTTEPAVGTKAHSINQDAMIKREEALLEKVELTLSKSGKQFSIERLKALGATTFEGTTSPTDVEEWVNLVEKCFR

A0A5A7TVT1 Gag protease polyprotein1.0e-1257.78Show/hide
Query:  KREEALLEKVELTLSKSGKQFSIERLKALGATTFEGTTSPTDVEEWVNLVEKCF----RYEFLDLK-------------QGNMAIAEYEK
        +REEALLE+V  TLSKS  QFSIERLKALGA T EGT +P DVE  VNLVEKCF    R E   +K             + +MAIAEYEK
Subjt:  KREEALLEKVELTLSKSGKQFSIERLKALGATTFEGTTSPTDVEEWVNLVEKCF----RYEFLDLK-------------QGNMAIAEYEK

A0A5D3DDC6 Retrotrans_gag domain-containing protein2.1e-1052Show/hide
Query:  TLSKSGKQFSIERLKALGATTFEGTTSPTDVEEWVNLVEKCF---------------RYEFLDLKQGNMAIAEYE
        T S   K+FSIERLK LGATTFEGTT P DVE+W+NL+EKCF               R EF+   Q +M++ EYE
Subjt:  TLSKSGKQFSIERLKALGATTFEGTTSPTDVEEWVNLVEKCF---------------RYEFLDLKQGNMAIAEYE

A0A5D3E3Z7 Uncharacterized protein3.8e-44100Show/hide
Query:  MKAGYYVMPRTGKGHTRSQTTTEPAVGTKAHSINQDAMIKREEALLEKVELTLSKSGKQFSIERLKALGATTFEGTTSPTDVEEWVNLVEKCFR
        MKAGYYVMPRTGKGHTRSQTTTEPAVGTKAHSINQDAMIKREEALLEKVELTLSKSGKQFSIERLKALGATTFEGTTSPTDVEEWVNLVEKCFR
Subjt:  MKAGYYVMPRTGKGHTRSQTTTEPAVGTKAHSINQDAMIKREEALLEKVELTLSKSGKQFSIERLKALGATTFEGTTSPTDVEEWVNLVEKCFR

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGAAAGCAGGATACTATGTTATGCCAAGGACGGGAAAAGGACATACTAGATCGCAGACAACTACTGAGCCCGCTGTGGGCACAAAAGCTCACTCGATAAATCAAGATGC
AATGATAAAAAGAGAAGAAGCGCTGCTTGAAAAAGTTGAACTGACATTAAGTAAGTCAGGAAAGCAATTTAGTATTGAAAGGTTGAAGGCATTGGGAGCTACGACCTTCG
AAGGAACCACGAGTCCAACTGATGTAGAGGAATGGGTGAACTTGGTCGAGAAATGTTTCAGATATGAATTCTTGGATTTAAAACAAGGCAATATGGCTATTGCGGAGTAT
GAAAAAATTTAA
mRNA sequenceShow/hide mRNA sequence
ATGAAAGCAGGATACTATGTTATGCCAAGGACGGGAAAAGGACATACTAGATCGCAGACAACTACTGAGCCCGCTGTGGGCACAAAAGCTCACTCGATAAATCAAGATGC
AATGATAAAAAGAGAAGAAGCGCTGCTTGAAAAAGTTGAACTGACATTAAGTAAGTCAGGAAAGCAATTTAGTATTGAAAGGTTGAAGGCATTGGGAGCTACGACCTTCG
AAGGAACCACGAGTCCAACTGATGTAGAGGAATGGGTGAACTTGGTCGAGAAATGTTTCAGATATGAATTCTTGGATTTAAAACAAGGCAATATGGCTATTGCGGAGTAT
GAAAAAATTTAA
Protein sequenceShow/hide protein sequence
MKAGYYVMPRTGKGHTRSQTTTEPAVGTKAHSINQDAMIKREEALLEKVELTLSKSGKQFSIERLKALGATTFEGTTSPTDVEEWVNLVEKCFRYEFLDLKQGNMAIAEY
EKI