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IVF0019309 (gene) of Melon (IVF77) v1 genome

Gene IDIVF0019309
OrganismCucumis melo ssp. agrestis cv. IVF77 (Melon (IVF77) v1)
DescriptionRetrovirus-related Pol polyprotein from transposon TNT 1-94
Genome locationchr11:4913806..4913997
RNA-Seq ExpressionIVF0019309
SyntenyIVF0019309
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0046012.1 Retrovirus-related Pol polyprotein from transposon TNT 1-94 [Cucumis melo var. makuwa]1.30e-2379.03Show/hide
Query:  AVSDATDLVAVAGERTLAGSWRDADRLPIREEWRLERRGSGTRISCGRGWRALRKPRLRRDG
        AVSDA DL+A AG RT AG WRDA RLPIREEWRLE RG GTRI C RGWRAL K RLRRDG
Subjt:  AVSDATDLVAVAGERTLAGSWRDADRLPIREEWRLERRGSGTRISCGRGWRALRKPRLRRDG
TrEMBL top hitse value%identityAlignment
A0A5A7TRI9 Retrovirus-related Pol polyprotein from transposon TNT 1-943.4e-1879.03Show/hide
Query:  AVSDATDLVAVAGERTLAGSWRDADRLPIREEWRLERRGSGTRISCGRGWRALRKPRLRRDG
        AVSDA DL+A AG RT AG WRDA RLPIREEWRLE RG GTRI C RGWRAL K RLRRDG
Subjt:  AVSDATDLVAVAGERTLAGSWRDADRLPIREEWRLERRGSGTRISCGRGWRALRKPRLRRDG
SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGCGGTGAGCGACGCGACTGATCTCGTGGCGGTAGCTGGCGAAAGAACTCTGGCTGGCAGCTGGAGAGATGCGGATCGACTTCCGATCCGCGAAGAGTGGCGGCTGGA
GAGACGCGGGTCAGGAACGCGGATCAGCTGCGGTCGCGGGTGGCGTGCGCTTCGCAAACCTCGACTCAGACGCGACGGCTAG
mRNA sequenceShow/hide mRNA sequence
ATGGCGGTGAGCGACGCGACTGATCTCGTGGCGGTAGCTGGCGAAAGAACTCTGGCTGGCAGCTGGAGAGATGCGGATCGACTTCCGATCCGCGAAGAGTGGCGGCTGGA
GAGACGCGGGTCAGGAACGCGGATCAGCTGCGGTCGCGGGTGGCGTGCGCTTCGCAAACCTCGACTCAGACGCGACGGCTAG
Protein sequenceShow/hide protein sequence
MAVSDATDLVAVAGERTLAGSWRDADRLPIREEWRLERRGSGTRISCGRGWRALRKPRLRRDG