; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

IVF0019320 (gene) of Melon (IVF77) v1 genome

Gene IDIVF0019320
OrganismCucumis melo ssp. agrestis cv. IVF77 (Melon (IVF77) v1)
DescriptionGag/pol protein
Genome locationchr12:10434642..10434956
RNA-Seq ExpressionIVF0019320
SyntenyIVF0019320
Gene Ontology termsGO:0090304 - nucleic acid metabolic process (biological process)
GO:0016020 - membrane (cellular component)
GO:0046872 - metal ion binding (molecular function)
GO:0140640 - catalytic activity, acting on a nucleic acid (molecular function)
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0037172.1 putative nuclease HARBI1 [Cucumis melo var. makuwa]8.76e-2573.97Show/hide
Query:  GNGLSSRTSGVRPKKMHVRMPQAQFSRPRVKSSPPAVYSLCFVLVISHSIFGARTPRTSTHSSGMLPNTLSQG
        GNGLSSRTSG RPKK   RMP  QFSRP VKS PP V SLCFVL IS SIF A T RTSTH+ GMLP+T SQG
Subjt:  GNGLSSRTSGVRPKKMHVRMPQAQFSRPRVKSSPPAVYSLCFVLVISHSIFGARTPRTSTHSSGMLPNTLSQG

KAA0062888.1 non-LTR retroelement reverse transcriptase-like protein [Cucumis melo var. makuwa]4.43e-2867.05Show/hide
Query:  GNGLSSRTSGVRPKKMHVRMPQAQFSRPRVKSSPPAVYSLCFVLVISHSIFGARTPRTSTHSSGMLPNTLSQGIGWEANSFEGELRCD
        GNGL+SRTSG  PKK   RMP++QFSR   KS  P V SLCFVLVI+ SIF ARTPRTSTH++GMLP+  S+GIG EA+S EGEL C+
Subjt:  GNGLSSRTSGVRPKKMHVRMPQAQFSRPRVKSSPPAVYSLCFVLVISHSIFGARTPRTSTHSSGMLPNTLSQGIGWEANSFEGELRCD

KAA0065516.1 uncharacterized protein E6C27_scaffold638G00090 [Cucumis melo var. makuwa]2.15e-2057.65Show/hide
Query:  GNGLSSRTSGVRPKKMHVRMPQAQFSRPRVKSSPPAVYSLCFVLVISHSIFGARTPRTSTHSSGMLPNTLSQGIGWEANSFEGEL
        GNGLSSRTSGVR +K+  RMP+  F   RVKS P  V   C V VIS S FG   PRTS +  G++P+  SQGIGWE +S EGEL
Subjt:  GNGLSSRTSGVRPKKMHVRMPQAQFSRPRVKSSPPAVYSLCFVLVISHSIFGARTPRTSTHSSGMLPNTLSQGIGWEANSFEGEL

TYJ98800.1 uncharacterized protein E5676_scaffold1625G00140 [Cucumis melo var. makuwa]3.41e-1956.47Show/hide
Query:  GNGLSSRTSGVRPKKMHVRMPQAQFSRPRVKSSPPAVYSLCFVLVISHSIFGARTPRTSTHSSGMLPNTLSQGIGWEANSFEGEL
        GNGLSSRTSGVR +K+  RMP+  F   RVKS P  V   C V VIS S F    PRTS +  G++P+  SQGIGWE +S EGEL
Subjt:  GNGLSSRTSGVRPKKMHVRMPQAQFSRPRVKSSPPAVYSLCFVLVISHSIFGARTPRTSTHSSGMLPNTLSQGIGWEANSFEGEL

TYK22521.1 uncharacterized protein E5676_scaffold387G00220 [Cucumis melo var. makuwa]7.57e-2372.22Show/hide
Query:  GNGLSSRTSGVRPKKMHVRMPQAQFSRPRVKSSPPAVYSLCFVLVISHSIFGARTPRTSTHSSGMLPNTLSQ
        GNGLSSRTSG RPKK   RMPQ QFSRP  KS PP V +LC VLV S SIFGA TPRTSTH+ GMLP+T S+
Subjt:  GNGLSSRTSGVRPKKMHVRMPQAQFSRPRVKSSPPAVYSLCFVLVISHSIFGARTPRTSTHSSGMLPNTLSQ

TrEMBL top hitse value%identityAlignment
A0A5A7V5J2 Non-LTR retroelement reverse transcriptase-like protein2.6e-2365.56Show/hide
Query:  ARGNGLSSRTSGVRPKKMHVRMPQAQFSRPRVKSSPPAVYSLCFVLVISHSIFGARTPRTSTHSSGMLPNTLSQGIGWEANSFEGELRCD
        + GNGL+SRTSG  PKK   RMP++QFSR   KS  P V SLCFVLVI+ SIF ARTPRTSTH++GMLP+  S+GIG EA+S EGEL C+
Subjt:  ARGNGLSSRTSGVRPKKMHVRMPQAQFSRPRVKSSPPAVYSLCFVLVISHSIFGARTPRTSTHSSGMLPNTLSQGIGWEANSFEGELRCD

A0A5A7VGQ5 Uncharacterized protein1.1e-1653.12Show/hide
Query:  MSETTRNVLARGNGLSSRTSGVRPKKMHVRMPQAQFSRPRVKSSPPAVYSLCFVLVISHSIFGARTPRTSTHSSGMLPNTLSQGIGWEANSFEGEL
        + E T++  + GNGLSSRTSGVR +K+  RMP+  F   RVKS P  V   C V VIS S FG   PRTS +  G++P+  SQGIGWE +S EGEL
Subjt:  MSETTRNVLARGNGLSSRTSGVRPKKMHVRMPQAQFSRPRVKSSPPAVYSLCFVLVISHSIFGARTPRTSTHSSGMLPNTLSQGIGWEANSFEGEL

A0A5D3BG85 Uncharacterized protein1.2e-1552.08Show/hide
Query:  MSETTRNVLARGNGLSSRTSGVRPKKMHVRMPQAQFSRPRVKSSPPAVYSLCFVLVISHSIFGARTPRTSTHSSGMLPNTLSQGIGWEANSFEGEL
        + E T++  + GNGLSSRTSGVR +K+  RMP+  F   RVKS P  V   C V VIS S F    PRTS +  G++P+  SQGIGWE +S EGEL
Subjt:  MSETTRNVLARGNGLSSRTSGVRPKKMHVRMPQAQFSRPRVKSSPPAVYSLCFVLVISHSIFGARTPRTSTHSSGMLPNTLSQGIGWEANSFEGEL

A0A5D3CQ36 Putative nuclease HARBI15.1e-1972Show/hide
Query:  ARGNGLSSRTSGVRPKKMHVRMPQAQFSRPRVKSSPPAVYSLCFVLVISHSIFGARTPRTSTHSSGMLPNTLSQG
        + GNGLSSRTSG RPKK   RMP  QFSRP VKS PP V SLCFVL IS SIF A T RTSTH+ GMLP+T SQG
Subjt:  ARGNGLSSRTSGVRPKKMHVRMPQAQFSRPRVKSSPPAVYSLCFVLVISHSIFGARTPRTSTHSSGMLPNTLSQG

A0A5D3DFP2 Uncharacterized protein1.1e-1872.22Show/hide
Query:  GNGLSSRTSGVRPKKMHVRMPQAQFSRPRVKSSPPAVYSLCFVLVISHSIFGARTPRTSTHSSGMLPNTLSQ
        GNGLSSRTSG RPKK   RMPQ QFSRP  KS PP V +LC VLV S SIFGA TPRTSTH+ GMLP+T S+
Subjt:  GNGLSSRTSGVRPKKMHVRMPQAQFSRPRVKSSPPAVYSLCFVLVISHSIFGARTPRTSTHSSGMLPNTLSQ

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGAACGCTCGTCCGATGTCAGAAACCACTAGAAATGTACTTGCACGAGGAAACGGGCTGAGCTCGAGGACTTCCGGTGTTCGTCCCAAGAAAATGCATGTGAGAATGCC
TCAGGCTCAGTTTTCTCGTCCTAGGGTGAAAAGCAGTCCTCCGGCGGTTTATTCCCTTTGCTTCGTATTAGTCATAAGTCATTCGATCTTTGGGGCTCGTACTCCGAGGA
CTTCAACCCACTCTTCTGGCATGCTCCCTAACACGTTGTCCCAAGGTATAGGTTGGGAAGCAAACTCGTTTGAGGGAGAACTAAGGTGCGACTAA
mRNA sequenceShow/hide mRNA sequence
ATGAACGCTCGTCCGATGTCAGAAACCACTAGAAATGTACTTGCACGAGGAAACGGGCTGAGCTCGAGGACTTCCGGTGTTCGTCCCAAGAAAATGCATGTGAGAATGCC
TCAGGCTCAGTTTTCTCGTCCTAGGGTGAAAAGCAGTCCTCCGGCGGTTTATTCCCTTTGCTTCGTATTAGTCATAAGTCATTCGATCTTTGGGGCTCGTACTCCGAGGA
CTTCAACCCACTCTTCTGGCATGCTCCCTAACACGTTGTCCCAAGGTATAGGTTGGGAAGCAAACTCGTTTGAGGGAGAACTAAGGTGCGACTAA
Protein sequenceShow/hide protein sequence
MNARPMSETTRNVLARGNGLSSRTSGVRPKKMHVRMPQAQFSRPRVKSSPPAVYSLCFVLVISHSIFGARTPRTSTHSSGMLPNTLSQGIGWEANSFEGELRCD