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IVF0019348 (gene) of Melon (IVF77) v1 genome

Gene IDIVF0019348
OrganismCucumis melo ssp. agrestis cv. IVF77 (Melon (IVF77) v1)
DescriptionUnknown protein
Genome locationchr01:6309212..6309475
RNA-Seq ExpressionIVF0019348
SyntenyIVF0019348
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0033278.1 hypothetical protein E6C27_scaffold845G00800 [Cucumis melo var. makuwa]8.95e-0543.42Show/hide
Query:  PYVAAKRIINFIFNVAAAEMIIFVFVFKMDTTKRIIFIFVGHHLHLQCSAIEAIIIFIFNAAQLRRLSSSSSMRRS
        P    +RII FIF+ A           +  ++  +     GH LHL C A E +I+FIF+AAQ RR SSSS MRRS
Subjt:  PYVAAKRIINFIFNVAAAEMIIFVFVFKMDTTKRIIFIFVGHHLHLQCSAIEAIIIFIFNAAQLRRLSSSSSMRRS

KAA0048558.1 retrotransposon gag protein [Cucumis melo var. makuwa]2.15e-0544.94Show/hide
Query:  MCYCRED--LHLLPYVAAKRIINFIFNVAAAEMIIFVFVFKMDTTKRIIFIFVGHHLHLQCSAIEAIIIFIFNAAQLRRLSSSSSMRRS
        MCY RED  LHLL  V  + II FIF+            F    T   + +    HLH QCSA EA +IFIFN A+ R+ SSSS M+ S
Subjt:  MCYCRED--LHLLPYVAAKRIINFIFNVAAAEMIIFVFVFKMDTTKRIIFIFVGHHLHLQCSAIEAIIIFIFNAAQLRRLSSSSSMRRS

KAA0051997.1 hypothetical protein E6C27_scaffold60G004810 [Cucumis melo var. makuwa]9.71e-0540Show/hide
Query:  EDLHLLPYVAAKRIINFIFN------------VAAAEMIIFVFVFKMDTTKRI-----------IFIFVGHHLHLQCSAIEAIIIFIFNAAQLRRLSSSS
          LHLL  V  + II FIF+               A+ II   +FK+   KR            + +  GHH +LQC  +E IIIFIFN  + RRLSSSS
Subjt:  EDLHLLPYVAAKRIINFIFN------------VAAAEMIIFVFVFKMDTTKRI-----------IFIFVGHHLHLQCSAIEAIIIFIFNAAQLRRLSSSS

Query:  SMRRS
        SM RS
Subjt:  SMRRS

KAA0061611.1 retrotransposon gag protein [Cucumis melo var. makuwa]5.47e-0545.05Show/hide
Query:  MCYCRED--LHLLPYVAAKRIINFIFNVAAAEMIIFVFVFKMDTTKRIIFIFVGHHLHLQCSAIEA--IIIFIFNAAQLRRLSSSSSMRRS
        MCY RED  LHLL YVA + II FIF+          F     T + +       HLH QCS  EA  ++IFIFN A+ ++ SSSS MR S
Subjt:  MCYCRED--LHLLPYVAAKRIINFIFNVAAAEMIIFVFVFKMDTTKRIIFIFVGHHLHLQCSAIEA--IIIFIFNAAQLRRLSSSSSMRRS

TYK26477.1 hypothetical protein E5676_scaffold313G00420 [Cucumis melo var. makuwa]6.83e-0938.93Show/hide
Query:  MCYCREDLHL---LPYVAAKRIINFIFNVAAAEMIIFVFVFKM----------------------------DTTKRIIFIFVGHHLHLQCSAIEAIIIF-
        +C  +ED H    L  VAAK+II F+FNV A E IIF+FVF M                            +T   II   + HHLHLQC A EA++IF 
Subjt:  MCYCREDLHL---LPYVAAKRIINFIFNVAAAEMIIFVFVFKM----------------------------DTTKRIIFIFVGHHLHLQCSAIEAIIIF-

Query:  ---------------IFNAAQLRRLSSSSSM
                       IFN A  RR SSSSSM
Subjt:  ---------------IFNAAQLRRLSSSSSM

TrEMBL top hitse value%identityAlignment
A0A5A7SRV7 Uncharacterized protein3.9e-0434.9Show/hide
Query:  YCREDLHLLPYVAAKRIINFIFN-----------------------------VAAAEMIIFVF--VFKMDTT---------------KRIIFIF------
        + REDLH LP VA +RI  FIF+                             VAA ++ IF+F  VF++  +               + IIFIF      
Subjt:  YCREDLHLLPYVAAKRIINFIFN-----------------------------VAAAEMIIFVF--VFKMDTT---------------KRIIFIF------

Query:  ------------VGHHLHLQCSAIEAIIIFIFNAAQLRRLSSSSSMRRS
                     GH LHL C A E +I+FIF+AAQ RR SSSS MRRS
Subjt:  ------------VGHHLHLQCSAIEAIIIFIFNAAQLRRLSSSSSMRRS

A0A5A7UC34 Uncharacterized protein1.7e-0441.96Show/hide
Query:  MCYCRED--LHLLPYVAAKRIINFIFN------------VAAAEMIIFVFVFKMDTTKRI-----------IFIFVGHHLHLQCSAIEAIIIFIFNAAQL
        MC  RED  LHLL  V  + II FIF+               A+ II   +FK+   KR            + +  GHH +LQC  +E IIIFIFN  + 
Subjt:  MCYCRED--LHLLPYVAAKRIINFIFN------------VAAAEMIIFVFVFKMDTTKRI-----------IFIFVGHHLHLQCSAIEAIIIFIFNAAQL

Query:  RRLSSSSSMRRS
        RRLSSSSSM RS
Subjt:  RRLSSSSSMRRS

A0A5D3DRX7 Uncharacterized protein1.9e-0638.93Show/hide
Query:  MCYCREDLH---LLPYVAAKRIINFIFNVAAAEMIIFVFVFKM----------------------------DTTKRIIFIFVGHHLHLQCSAIEA-----
        +C  +ED H    L  VAAK+II F+FNV A E IIF+FVF M                            +T   II   + HHLHLQC A EA     
Subjt:  MCYCREDLH---LLPYVAAKRIINFIFNVAAAEMIIFVFVFKM----------------------------DTTKRIIFIFVGHHLHLQCSAIEA-----

Query:  -----------IIIFIFNAAQLRRLSSSSSM
                   ++IFIFN A  RR SSSSSM
Subjt:  -----------IIIFIFNAAQLRRLSSSSSM

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGTGTTACTGTCGAGAGGATCTTCATCTTCTGCCATATGTTGCAGCCAAGAGGATCATTAACTTCATCTTCAATGTTGCTGCAGCCGAGATGATTATCTTCGTCTTCGT
CTTTAAGATGGACACAACAAAGAGGATCATCTTTATCTTCGTGGGTCATCATCTTCATCTTCAATGCAGCGCAATAGAGGCGATCATCATCTTCATCTTCAATGCGGCAC
AGCTGAGACGATTATCATCTTCATCTTCCATGCGGCGCAGTTGA
mRNA sequenceShow/hide mRNA sequence
ATGTGTTACTGTCGAGAGGATCTTCATCTTCTGCCATATGTTGCAGCCAAGAGGATCATTAACTTCATCTTCAATGTTGCTGCAGCCGAGATGATTATCTTCGTCTTCGT
CTTTAAGATGGACACAACAAAGAGGATCATCTTTATCTTCGTGGGTCATCATCTTCATCTTCAATGCAGCGCAATAGAGGCGATCATCATCTTCATCTTCAATGCGGCAC
AGCTGAGACGATTATCATCTTCATCTTCCATGCGGCGCAGTTGA
Protein sequenceShow/hide protein sequence
MCYCREDLHLLPYVAAKRIINFIFNVAAAEMIIFVFVFKMDTTKRIIFIFVGHHLHLQCSAIEAIIIFIFNAAQLRRLSSSSSMRRS