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IVF0019369 (gene) of Melon (IVF77) v1 genome

Gene IDIVF0019369
OrganismCucumis melo ssp. agrestis cv. IVF77 (Melon (IVF77) v1)
DescriptionTubulin-folding cofactor E
Genome locationchr02:8753396..8754721
RNA-Seq ExpressionIVF0019369
SyntenyIVF0019369
Gene Ontology termsGO:0009987 - cellular process (biological process)
GO:0016021 - integral component of membrane (cellular component)
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0060189.1 tubulin-folding cofactor E isoform X2 [Cucumis melo var. makuwa]7.43e-5185.19Show/hide
Query:  IYLCIRFEELKRFYGIEDNRASVGPTGAQKLSSGLISIALKCVGTLIGEKPPVTKKLPPVTS--------LALHSRDSPMPILLEDDMPSLMDLGVGNEF
        IYL IRFEELKRFYGIEDNRASVGPTGAQKLSSGLISI LKCVGTLIGEK  VTKKLPPVTS        LALH  DSPMPILLEDDMPSL+DLGVGNEF
Subjt:  IYLCIRFEELKRFYGIEDNRASVGPTGAQKLSSGLISIALKCVGTLIGEKPPVTKKLPPVTS--------LALHSRDSPMPILLEDDMPSLMDLGVGNEF

Query:  NILMDEES
        NIL+DEES
Subjt:  NILMDEES

TYK14771.1 tubulin-folding cofactor E isoform X3 [Cucumis melo var. makuwa]8.38e-5492.16Show/hide
Query:  FEELKRFYGIEDNRASVGPTGAQKLSSGLISIALKCVGTLIGEKPPVTKKLPPVTS--------LALHSRDSPMPILLEDDMPSLMDLGVGNEFNILMDE
        FEELKRFYGIEDNRASVGPTGAQKLSSGLISIALKCVGTLIGEKPPVTKKLPPVTS        LALHSRDSPMPILLEDDMPSLMDLGVGNEFNILMDE
Subjt:  FEELKRFYGIEDNRASVGPTGAQKLSSGLISIALKCVGTLIGEKPPVTKKLPPVTS--------LALHSRDSPMPILLEDDMPSLMDLGVGNEFNILMDE

Query:  ES
        ES
Subjt:  ES

XP_008445986.1 PREDICTED: tubulin-folding cofactor E isoform X1 [Cucumis melo]1.79e-4661.88Show/hide
Query:  YVHMVMSNLDGNREETLRLHPRELHLNKTYAQTYPLLHPPIYLCIRFEELKRFYGIEDNRASVGPTGAQKLSSGLISIALKCVGTLIGEKPPVTKKLPPV
        Y+ MVMSNLDGNRE+T RLHPR                        FEELKRFYGIEDNRASVGP G QKLSSGLISI LKCVG  IGEKPPVTKKLPP 
Subjt:  YVHMVMSNLDGNREETLRLHPRELHLNKTYAQTYPLLHPPIYLCIRFEELKRFYGIEDNRASVGPTGAQKLSSGLISIALKCVGTLIGEKPPVTKKLPPV

Query:  TS--------------------LALHSRDSPMPILLEDDMPSLMDLGVGNEFNILMDEES
        TS                    L L   DSPMPILLEDDM SLMDLGVGNE NIL+DEES
Subjt:  TS--------------------LALHSRDSPMPILLEDDMPSLMDLGVGNEFNILMDEES

XP_008445987.1 PREDICTED: tubulin-folding cofactor E isoform X2 [Cucumis melo]1.11e-4661.88Show/hide
Query:  YVHMVMSNLDGNREETLRLHPRELHLNKTYAQTYPLLHPPIYLCIRFEELKRFYGIEDNRASVGPTGAQKLSSGLISIALKCVGTLIGEKPPVTKKLPPV
        Y+ MVMSNLDGNRE+T RLHPR                        FEELKRFYGIEDNRASVGP G QKLSSGLISI LKCVG  IGEKPPVTKKLPP 
Subjt:  YVHMVMSNLDGNREETLRLHPRELHLNKTYAQTYPLLHPPIYLCIRFEELKRFYGIEDNRASVGPTGAQKLSSGLISIALKCVGTLIGEKPPVTKKLPPV

Query:  TS--------------------LALHSRDSPMPILLEDDMPSLMDLGVGNEFNILMDEES
        TS                    L L   DSPMPILLEDDM SLMDLGVGNE NIL+DEES
Subjt:  TS--------------------LALHSRDSPMPILLEDDMPSLMDLGVGNEFNILMDEES

XP_008445988.1 PREDICTED: tubulin-folding cofactor E isoform X3 [Cucumis melo]9.63e-4761.88Show/hide
Query:  YVHMVMSNLDGNREETLRLHPRELHLNKTYAQTYPLLHPPIYLCIRFEELKRFYGIEDNRASVGPTGAQKLSSGLISIALKCVGTLIGEKPPVTKKLPPV
        Y+ MVMSNLDGNRE+T RLHPR                        FEELKRFYGIEDNRASVGP G QKLSSGLISI LKCVG  IGEKPPVTKKLPP 
Subjt:  YVHMVMSNLDGNREETLRLHPRELHLNKTYAQTYPLLHPPIYLCIRFEELKRFYGIEDNRASVGPTGAQKLSSGLISIALKCVGTLIGEKPPVTKKLPPV

Query:  TS--------------------LALHSRDSPMPILLEDDMPSLMDLGVGNEFNILMDEES
        TS                    L L   DSPMPILLEDDM SLMDLGVGNE NIL+DEES
Subjt:  TS--------------------LALHSRDSPMPILLEDDMPSLMDLGVGNEFNILMDEES

TrEMBL top hitse value%identityAlignment
A0A0A0LXY2 Uncharacterized protein1.3e-6966.09Show/hide
Query:  MEGVQPNLEGKLGYPHKITFGYLRNY-DQGKVTENKYSTKKEENCLADEGNNWKTIDIPFTIVHNCLSSSLNHYVHMVMSNLDGNREETLRLHPRELHLN
        M   QPNLEGK+G  HK TFGYL    DQ KVTENK+ TKKEENCLADEGNNWKT  IPFTIVHN L SSLNHYV MVMSNLDGN EETLRLHP      
Subjt:  MEGVQPNLEGKLGYPHKITFGYLRNY-DQGKVTENKYSTKKEENCLADEGNNWKTIDIPFTIVHNCLSSSLNHYVHMVMSNLDGNREETLRLHPRELHLN

Query:  KTYAQTYPLLHPPIYLCIRFEELKRFYGIEDNRASVGPTGAQKLSSGLISIALKCVGTLIGEKPPVTKKLPPVTS--------------------LALHS
                          RFEELK FYGIEDN ASVGP G QKLSSGLISI LKCVG  IGEKPPVTKKLPP TS                    L L  
Subjt:  KTYAQTYPLLHPPIYLCIRFEELKRFYGIEDNRASVGPTGAQKLSSGLISIALKCVGTLIGEKPPVTKKLPPVTS--------------------LALHS

Query:  RDSPMPILLEDDMPSLMDLGVGNEFNILMDEES
         DSPMPILLEDDM SLMDLGVGNE NIL+DEES
Subjt:  RDSPMPILLEDDMPSLMDLGVGNEFNILMDEES

A0A1S3BEN9 Tubulin-folding cofactor E1.4e-3961.88Show/hide
Query:  YVHMVMSNLDGNREETLRLHPRELHLNKTYAQTYPLLHPPIYLCIRFEELKRFYGIEDNRASVGPTGAQKLSSGLISIALKCVGTLIGEKPPVTKKLPPV
        Y+ MVMSNLDGNRE+T RLHP                        RFEELKRFYGIEDNRASVGP G QKLSSGLISI LKCVG  IGEKPPVTKKLPP 
Subjt:  YVHMVMSNLDGNREETLRLHPRELHLNKTYAQTYPLLHPPIYLCIRFEELKRFYGIEDNRASVGPTGAQKLSSGLISIALKCVGTLIGEKPPVTKKLPPV

Query:  TS--------------------LALHSRDSPMPILLEDDMPSLMDLGVGNEFNILMDEES
        TS                    L L   DSPMPILLEDDM SLMDLGVGNE NIL+DEES
Subjt:  TS--------------------LALHSRDSPMPILLEDDMPSLMDLGVGNEFNILMDEES

A0A1S3BEU4 Tubulin-folding cofactor E1.4e-3961.88Show/hide
Query:  YVHMVMSNLDGNREETLRLHPRELHLNKTYAQTYPLLHPPIYLCIRFEELKRFYGIEDNRASVGPTGAQKLSSGLISIALKCVGTLIGEKPPVTKKLPPV
        Y+ MVMSNLDGNRE+T RLHP                        RFEELKRFYGIEDNRASVGP G QKLSSGLISI LKCVG  IGEKPPVTKKLPP 
Subjt:  YVHMVMSNLDGNREETLRLHPRELHLNKTYAQTYPLLHPPIYLCIRFEELKRFYGIEDNRASVGPTGAQKLSSGLISIALKCVGTLIGEKPPVTKKLPPV

Query:  TS--------------------LALHSRDSPMPILLEDDMPSLMDLGVGNEFNILMDEES
        TS                    L L   DSPMPILLEDDM SLMDLGVGNE NIL+DEES
Subjt:  TS--------------------LALHSRDSPMPILLEDDMPSLMDLGVGNEFNILMDEES

A0A5A7SYG1 Tubulin-folding cofactor E1.4e-3961.88Show/hide
Query:  YVHMVMSNLDGNREETLRLHPRELHLNKTYAQTYPLLHPPIYLCIRFEELKRFYGIEDNRASVGPTGAQKLSSGLISIALKCVGTLIGEKPPVTKKLPPV
        Y+ MVMSNLDGNRE+T RLHP                        RFEELKRFYGIEDNRASVGP G QKLSSGLISI LKCVG  IGEKPPVTKKLPP 
Subjt:  YVHMVMSNLDGNREETLRLHPRELHLNKTYAQTYPLLHPPIYLCIRFEELKRFYGIEDNRASVGPTGAQKLSSGLISIALKCVGTLIGEKPPVTKKLPPV

Query:  TS--------------------LALHSRDSPMPILLEDDMPSLMDLGVGNEFNILMDEES
        TS                    L L   DSPMPILLEDDM SLMDLGVGNE NIL+DEES
Subjt:  TS--------------------LALHSRDSPMPILLEDDMPSLMDLGVGNEFNILMDEES

A0A5D3CSG8 Tubulin-folding cofactor E isoform X35.1e-4292.16Show/hide
Query:  FEELKRFYGIEDNRASVGPTGAQKLSSGLISIALKCVGTLIGEKPPVTKKLPPVTS--------LALHSRDSPMPILLEDDMPSLMDLGVGNEFNILMDE
        FEELKRFYGIEDNRASVGPTGAQKLSSGLISIALKCVGTLIGEKPPVTKKLPPVTS        LALHSRDSPMPILLEDDMPSLMDLGVGNEFNILMDE
Subjt:  FEELKRFYGIEDNRASVGPTGAQKLSSGLISIALKCVGTLIGEKPPVTKKLPPVTS--------LALHSRDSPMPILLEDDMPSLMDLGVGNEFNILMDE

Query:  ES
        ES
Subjt:  ES

SwissProt top hitse value%identityAlignment
Q8GRL7 Tubulin-folding cofactor E9.3e-1736.88Show/hide
Query:  YVHMVMSNLDGNREETLRLHPRELHLNKTYAQTYPLLHPPIYLCIRFEELKRFYGIEDNRASVGPTGAQKLSSGLISIALKCVGTLIGEKPPVTKKLPPV
        YV MVMS L+    E   LHP                        RF ELK+ +GIED RAS   +G + ++SGLISI LKCVG  +GEKP +TKKLP  
Subjt:  YVHMVMSNLDGNREETLRLHPRELHLNKTYAQTYPLLHPPIYLCIRFEELKRFYGIEDNRASVGPTGAQKLSSGLISIALKCVGTLIGEKPPVTKKLPPV

Query:  TS--------------------LALHSRDSPMPILLEDDMPSLMDLGVGNEFNILMDEES
         +                    L L    SP P  L+D+  +L+D+G+ +   +L+DEES
Subjt:  TS--------------------LALHSRDSPMPILLEDDMPSLMDLGVGNEFNILMDEES

Arabidopsis top hitse value%identityAlignment
AT1G71440.1 tubulin folding cofactor E / Pfifferling (PFI)6.6e-1836.88Show/hide
Query:  YVHMVMSNLDGNREETLRLHPRELHLNKTYAQTYPLLHPPIYLCIRFEELKRFYGIEDNRASVGPTGAQKLSSGLISIALKCVGTLIGEKPPVTKKLPPV
        YV MVMS L+    E   LHP                        RF ELK+ +GIED RAS   +G + ++SGLISI LKCVG  +GEKP +TKKLP  
Subjt:  YVHMVMSNLDGNREETLRLHPRELHLNKTYAQTYPLLHPPIYLCIRFEELKRFYGIEDNRASVGPTGAQKLSSGLISIALKCVGTLIGEKPPVTKKLPPV

Query:  TS--------------------LALHSRDSPMPILLEDDMPSLMDLGVGNEFNILMDEES
         +                    L L    SP P  L+D+  +L+D+G+ +   +L+DEES
Subjt:  TS--------------------LALHSRDSPMPILLEDDMPSLMDLGVGNEFNILMDEES


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGAGGGAGTGCAACCTAATTTAGAGGGAAAATTGGGATACCCACACAAAATTACATTTGGGTACTTACGAAATTACGACCAGGGAAAGGTGACTGAAAATAAATACTC
GACGAAAAAAGAAGAAAATTGCTTGGCGGATGAAGGAAATAATTGGAAGACAATTGACATCCCATTCACAATTGTTCACAATTGTTTGTCTTCTTCTCTCAACCACTACG
TACACATGGTTATGTCAAATCTAGATGGCAATCGTGAGGAAACGTTGAGGCTACATCCTAGGGAACTTCATTTGAATAAAACTTATGCACAAACTTACCCCCTGTTGCAC
CCTCCGATATATTTGTGCATCAGATTTGAAGAGCTTAAGAGATTTTATGGGATTGAAGATAATAGGGCATCAGTTGGACCGACTGGAGCTCAGAAGCTGTCTTCTGGTCT
CATATCAATCGCTTTAAAGTGTGTGGGAACATTAATTGGTGAGAAGCCACCAGTAACAAAGAAACTGCCACCCGTTACATCACTTGCTTTACATTCTCGGGATTCTCCCA
TGCCGATATTGCTTGAGGATGATATGCCATCTCTGATGGATCTTGGCGTTGGGAATGAATTTAATATTCTTATGGATGAAGAGAGTTGA
mRNA sequenceShow/hide mRNA sequence
ATGGAGGGAGTGCAACCTAATTTAGAGGGAAAATTGGGATACCCACACAAAATTACATTTGGGTACTTACGAAATTACGACCAGGGAAAGGTGACTGAAAATAAATACTC
GACGAAAAAAGAAGAAAATTGCTTGGCGGATGAAGGAAATAATTGGAAGACAATTGACATCCCATTCACAATTGTTCACAATTGTTTGTCTTCTTCTCTCAACCACTACG
TACACATGGTTATGTCAAATCTAGATGGCAATCGTGAGGAAACGTTGAGGCTACATCCTAGGGAACTTCATTTGAATAAAACTTATGCACAAACTTACCCCCTGTTGCAC
CCTCCGATATATTTGTGCATCAGATTTGAAGAGCTTAAGAGATTTTATGGGATTGAAGATAATAGGGCATCAGTTGGACCGACTGGAGCTCAGAAGCTGTCTTCTGGTCT
CATATCAATCGCTTTAAAGTGTGTGGGAACATTAATTGGTGAGAAGCCACCAGTAACAAAGAAACTGCCACCCGTTACATCACTTGCTTTACATTCTCGGGATTCTCCCA
TGCCGATATTGCTTGAGGATGATATGCCATCTCTGATGGATCTTGGCGTTGGGAATGAATTTAATATTCTTATGGATGAAGAGAGTTGA
Protein sequenceShow/hide protein sequence
MEGVQPNLEGKLGYPHKITFGYLRNYDQGKVTENKYSTKKEENCLADEGNNWKTIDIPFTIVHNCLSSSLNHYVHMVMSNLDGNREETLRLHPRELHLNKTYAQTYPLLH
PPIYLCIRFEELKRFYGIEDNRASVGPTGAQKLSSGLISIALKCVGTLIGEKPPVTKKLPPVTSLALHSRDSPMPILLEDDMPSLMDLGVGNEFNILMDEES