; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

IVF0019372 (gene) of Melon (IVF77) v1 genome

Gene IDIVF0019372
OrganismCucumis melo ssp. agrestis cv. IVF77 (Melon (IVF77) v1)
Description40S ribosomal protein S19
Genome locationchr09:1762636..1764184
RNA-Seq ExpressionIVF0019372
SyntenyIVF0019372
Gene Ontology termsGO:0000028 - ribosomal small subunit assembly (biological process)
GO:0006412 - translation (biological process)
GO:0022627 - cytosolic small ribosomal subunit (cellular component)
GO:0003723 - RNA binding (molecular function)
GO:0003735 - structural constituent of ribosome (molecular function)
InterPro domainsIPR001266 - Ribosomal protein S19e
IPR018277 - Ribosomal protein S19e, conserved site
IPR036388 - Winged helix-like DNA-binding domain superfamily
IPR036390 - Winged helix DNA-binding domain superfamily


Homology Show/hide homology
GenBank top hitse value%identityAlignment
XP_004141465.1 40S ribosomal protein S19-3 [Cucumis sativus]1.73e-9799.31Show/hide
Query:  MATAKTVKDVSPHEFVKAYAAHLKRSGKVELPPWTDIVKTARFKELAPYDADWYYLRAASMARKIYLRGGLGVGAFKRIYGGSKRNGSRPPHFCESSGAI
        MATAKTVKDVSPHEFVKAYAAHLKRSGKVELPPWTDIVKTARFKELAPYDADWYYLRAASMARKIYLRGGLGVGAFKRIYGGSKRNGSRPPHFCESSGAI
Subjt:  MATAKTVKDVSPHEFVKAYAAHLKRSGKVELPPWTDIVKTARFKELAPYDADWYYLRAASMARKIYLRGGLGVGAFKRIYGGSKRNGSRPPHFCESSGAI

Query:  ARHILQQLQEMNIVDVDPKGDGRRITSSGRRDLDQVAGRIVVAP
        ARHILQQLQEMNIVDVDPKG GRRITSSGRRDLDQVAGRIVVAP
Subjt:  ARHILQQLQEMNIVDVDPKGDGRRITSSGRRDLDQVAGRIVVAP

XP_004148892.2 40S ribosomal protein S19-3 [Cucumis sativus]8.24e-9697.22Show/hide
Query:  MATAKTVKDVSPHEFVKAYAAHLKRSGKVELPPWTDIVKTARFKELAPYDADWYYLRAASMARKIYLRGGLGVGAFKRIYGGSKRNGSRPPHFCESSGAI
        MATA+TVKDVSPHEFVKAYAAHLKRSGKVELPPW DIVKTARFKELAPYDADWYY+RAASMARKIYLRGGLGVGAFKRIYGGSKRNGSRPPHFCESSGAI
Subjt:  MATAKTVKDVSPHEFVKAYAAHLKRSGKVELPPWTDIVKTARFKELAPYDADWYYLRAASMARKIYLRGGLGVGAFKRIYGGSKRNGSRPPHFCESSGAI

Query:  ARHILQQLQEMNIVDVDPKGDGRRITSSGRRDLDQVAGRIVVAP
        ARHILQQLQEMNIVDVDPKG GRRITSSGRRDLDQVAGRIVVAP
Subjt:  ARHILQQLQEMNIVDVDPKGDGRRITSSGRRDLDQVAGRIVVAP

XP_022923365.1 40S ribosomal protein S19-3-like [Cucurbita moschata]2.87e-9697.92Show/hide
Query:  MATAKTVKDVSPHEFVKAYAAHLKRSGKVELPPWTDIVKTARFKELAPYDADWYYLRAASMARKIYLRGGLGVGAFKRIYGGSKRNGSRPPHFCESSGAI
        MATAKTVKDVSPHEFVKAYAAHLKRSGKVELPPWTDIVKTARFKELAPYD DWYY+RAASMARKIYLRGGLGVGAFKRIYGGSKRNGSRPPHFCESSGAI
Subjt:  MATAKTVKDVSPHEFVKAYAAHLKRSGKVELPPWTDIVKTARFKELAPYDADWYYLRAASMARKIYLRGGLGVGAFKRIYGGSKRNGSRPPHFCESSGAI

Query:  ARHILQQLQEMNIVDVDPKGDGRRITSSGRRDLDQVAGRIVVAP
        ARHILQQLQEMNIVDVDPKG GRRITSSGRRDLDQVAGRIVVAP
Subjt:  ARHILQQLQEMNIVDVDPKGDGRRITSSGRRDLDQVAGRIVVAP

XP_022938991.1 40S ribosomal protein S19-3 [Cucurbita moschata]8.24e-9697.22Show/hide
Query:  MATAKTVKDVSPHEFVKAYAAHLKRSGKVELPPWTDIVKTARFKELAPYDADWYYLRAASMARKIYLRGGLGVGAFKRIYGGSKRNGSRPPHFCESSGAI
        MATAKTVKDVSPHEFVKAYAAHLKRSGKVELPPWTDIVKTARFKELAPYD DWYY+RAASMARKIYLRGGLGVGAFKRIYGGSKRNGSRPPHFCESSGAI
Subjt:  MATAKTVKDVSPHEFVKAYAAHLKRSGKVELPPWTDIVKTARFKELAPYDADWYYLRAASMARKIYLRGGLGVGAFKRIYGGSKRNGSRPPHFCESSGAI

Query:  ARHILQQLQEMNIVDVDPKGDGRRITSSGRRDLDQVAGRIVVAP
        ARHILQQLQEMNIVDVDPKG GR+ITSSGRRDLDQVAGRIVVAP
Subjt:  ARHILQQLQEMNIVDVDPKGDGRRITSSGRRDLDQVAGRIVVAP

XP_022954406.1 40S ribosomal protein S19-3-like [Cucurbita moschata]8.24e-9697.22Show/hide
Query:  MATAKTVKDVSPHEFVKAYAAHLKRSGKVELPPWTDIVKTARFKELAPYDADWYYLRAASMARKIYLRGGLGVGAFKRIYGGSKRNGSRPPHFCESSGAI
        MATA+TVKDVSPHEFVKAYAAHLKRSGKVELPPWTDIVKTARFKELAPYD DWYY+RAASMARKIYLRGGLGVGAFKRIYGGSKRNGSRPPHFCESSGAI
Subjt:  MATAKTVKDVSPHEFVKAYAAHLKRSGKVELPPWTDIVKTARFKELAPYDADWYYLRAASMARKIYLRGGLGVGAFKRIYGGSKRNGSRPPHFCESSGAI

Query:  ARHILQQLQEMNIVDVDPKGDGRRITSSGRRDLDQVAGRIVVAP
        ARHILQQLQEMNIVDVDPKG GRRITSSGRRDLDQVAGRIVVAP
Subjt:  ARHILQQLQEMNIVDVDPKGDGRRITSSGRRDLDQVAGRIVVAP

TrEMBL top hitse value%identityAlignment
A0A0A0KSI3 Uncharacterized protein2.0e-7499.31Show/hide
Query:  MATAKTVKDVSPHEFVKAYAAHLKRSGKVELPPWTDIVKTARFKELAPYDADWYYLRAASMARKIYLRGGLGVGAFKRIYGGSKRNGSRPPHFCESSGAI
        MATAKTVKDVSPHEFVKAYAAHLKRSGKVELPPWTDIVKTARFKELAPYDADWYYLRAASMARKIYLRGGLGVGAFKRIYGGSKRNGSRPPHFCESSGAI
Subjt:  MATAKTVKDVSPHEFVKAYAAHLKRSGKVELPPWTDIVKTARFKELAPYDADWYYLRAASMARKIYLRGGLGVGAFKRIYGGSKRNGSRPPHFCESSGAI

Query:  ARHILQQLQEMNIVDVDPKGDGRRITSSGRRDLDQVAGRIVVAP
        ARHILQQLQEMNIVDVDPKG GRRITSSGRRDLDQVAGRIVVAP
Subjt:  ARHILQQLQEMNIVDVDPKGDGRRITSSGRRDLDQVAGRIVVAP

A0A1S3CB93 40S ribosomal protein S19-32.0e-7499.31Show/hide
Query:  MATAKTVKDVSPHEFVKAYAAHLKRSGKVELPPWTDIVKTARFKELAPYDADWYYLRAASMARKIYLRGGLGVGAFKRIYGGSKRNGSRPPHFCESSGAI
        MATAKTVKDVSPHEFVKAYAAHLKRSGKVELPPWTDIVKTARFKELAPYDADWYYLRAASMARKIYLRGGLGVGAFKRIYGGSKRNGSRPPHFCESSGAI
Subjt:  MATAKTVKDVSPHEFVKAYAAHLKRSGKVELPPWTDIVKTARFKELAPYDADWYYLRAASMARKIYLRGGLGVGAFKRIYGGSKRNGSRPPHFCESSGAI

Query:  ARHILQQLQEMNIVDVDPKGDGRRITSSGRRDLDQVAGRIVVAP
        ARHILQQLQEMNIVDVDPKG GRRITSSGRRDLDQVAGRIVVAP
Subjt:  ARHILQQLQEMNIVDVDPKGDGRRITSSGRRDLDQVAGRIVVAP

A0A5A7T7J1 40S ribosomal protein S19-3-like2.0e-7499.31Show/hide
Query:  MATAKTVKDVSPHEFVKAYAAHLKRSGKVELPPWTDIVKTARFKELAPYDADWYYLRAASMARKIYLRGGLGVGAFKRIYGGSKRNGSRPPHFCESSGAI
        MATAKTVKDVSPHEFVKAYAAHLKRSGKVELPPWTDIVKTARFKELAPYDADWYYLRAASMARKIYLRGGLGVGAFKRIYGGSKRNGSRPPHFCESSGAI
Subjt:  MATAKTVKDVSPHEFVKAYAAHLKRSGKVELPPWTDIVKTARFKELAPYDADWYYLRAASMARKIYLRGGLGVGAFKRIYGGSKRNGSRPPHFCESSGAI

Query:  ARHILQQLQEMNIVDVDPKGDGRRITSSGRRDLDQVAGRIVVAP
        ARHILQQLQEMNIVDVDPKG GRRITSSGRRDLDQVAGRIVVAP
Subjt:  ARHILQQLQEMNIVDVDPKGDGRRITSSGRRDLDQVAGRIVVAP

A0A6J1EBL3 40S ribosomal protein S19-3-like1.7e-7397.92Show/hide
Query:  MATAKTVKDVSPHEFVKAYAAHLKRSGKVELPPWTDIVKTARFKELAPYDADWYYLRAASMARKIYLRGGLGVGAFKRIYGGSKRNGSRPPHFCESSGAI
        MATAKTVKDVSPHEFVKAYAAHLKRSGKVELPPWTDIVKTARFKELAPYD DWYY+RAASMARKIYLRGGLGVGAFKRIYGGSKRNGSRPPHFCESSGAI
Subjt:  MATAKTVKDVSPHEFVKAYAAHLKRSGKVELPPWTDIVKTARFKELAPYDADWYYLRAASMARKIYLRGGLGVGAFKRIYGGSKRNGSRPPHFCESSGAI

Query:  ARHILQQLQEMNIVDVDPKGDGRRITSSGRRDLDQVAGRIVVAP
        ARHILQQLQEMNIVDVDPKG GRRITSSGRRDLDQVAGRIVVAP
Subjt:  ARHILQQLQEMNIVDVDPKGDGRRITSSGRRDLDQVAGRIVVAP

A0A6J1JTL0 40S ribosomal protein S19-3-like1.7e-7397.92Show/hide
Query:  MATAKTVKDVSPHEFVKAYAAHLKRSGKVELPPWTDIVKTARFKELAPYDADWYYLRAASMARKIYLRGGLGVGAFKRIYGGSKRNGSRPPHFCESSGAI
        MATAKTVKDVSPHEFVKAYAAHLKRSGKVELPPWTDIVKTARFKELAPYD DWYY+RAASMARKIYLRGGLGVGAFKRIYGGSKRNGSRPPHFCESSGAI
Subjt:  MATAKTVKDVSPHEFVKAYAAHLKRSGKVELPPWTDIVKTARFKELAPYDADWYYLRAASMARKIYLRGGLGVGAFKRIYGGSKRNGSRPPHFCESSGAI

Query:  ARHILQQLQEMNIVDVDPKGDGRRITSSGRRDLDQVAGRIVVAP
        ARHILQQLQEMNIVDVDPKG GRRITSSGRRDLDQVAGRIVVAP
Subjt:  ARHILQQLQEMNIVDVDPKGDGRRITSSGRRDLDQVAGRIVVAP

SwissProt top hitse value%identityAlignment
P40978 40S ribosomal protein S194.2e-6179.43Show/hide
Query:  ATAKTVKDVSPHEFVKAYAAHLKRSGKVELPPWTDIVKTARFKELAPYDADWYYLRAASMARKIYLRGGLGVGAFKRIYGGSKRNGSRPPHFCESSGAIA
        +TA+TVKDV+PHEFVKAY+AHLKRSGK+ELP W DIVKTARFKEL PYD DWYY RAAS+ARKIYLR G+GVG F++IYGG +RNGSRPPHFC+SSGAI+
Subjt:  ATAKTVKDVSPHEFVKAYAAHLKRSGKVELPPWTDIVKTARFKELAPYDADWYYLRAASMARKIYLRGGLGVGAFKRIYGGSKRNGSRPPHFCESSGAIA

Query:  RHILQQLQEMNIVDVDPKGDGRRITSSGRRDLDQVAGRIVV
        R+ILQQLQ+M I+DVDPKG GR ITS GRRDLDQVAGR+ V
Subjt:  RHILQQLQEMNIVDVDPKGDGRRITSSGRRDLDQVAGRIVV

Q94613 40S ribosomal protein S193.0e-4356.3Show/hide
Query:  TVKDVSPHEFVKAYAAHLKRSGKVELPPWTDIVKTARFKELAPYDADWYYLRAASMARKIYLRGGLGVGAFKRIYGGSKRNGSRPPHFCESSGAIARHIL
        +VKDVS HEF +A+AA LK+SGK+++P WTD VKT  FKEL+PY+ DWY++RAAS+ R +Y+R   G+G+F++IYGG +R G+ P HFC+++G+I+R +L
Subjt:  TVKDVSPHEFVKAYAAHLKRSGKVELPPWTDIVKTARFKELAPYDADWYYLRAASMARKIYLRGGLGVGAFKRIYGGSKRNGSRPPHFCESSGAIARHIL

Query:  QQLQEMNIVDVDPKGDGRRITSSGRRDLDQVAGRI
        Q L+ + IV+ DP G GRR+TS GRRDLD++A +I
Subjt:  QQLQEMNIVDVDPKGDGRRITSSGRRDLDQVAGRI

Q9FNP8 40S ribosomal protein S19-36.7e-6785.31Show/hide
Query:  MATAKTVKDVSPHEFVKAYAAHLKRSGKVELPPWTDIVKTARFKELAPYDADWYYLRAASMARKIYLRGGLGVGAFKRIYGGSKRNGSRPPHFCESSGAI
        MAT KTVKDVSPHEFVKAYAAHLKRSGK+ELP WTDIVKT + KELAPYD DWYY+RAASMARK+YLRGGLGVGAF+RIYGGSKRNGSRPPHFC+SSG +
Subjt:  MATAKTVKDVSPHEFVKAYAAHLKRSGKVELPPWTDIVKTARFKELAPYDADWYYLRAASMARKIYLRGGLGVGAFKRIYGGSKRNGSRPPHFCESSGAI

Query:  ARHILQQLQEMNIVDVDPKGDGRRITSSGRRDLDQVAGRIVVA
        ARHILQQLQ MNIVD+D KG GR+ITSSG+RDLDQVAGRI  A
Subjt:  ARHILQQLQEMNIVDVDPKGDGRRITSSGRRDLDQVAGRIVVA

Q9LF30 40S ribosomal protein S19-22.8e-6585.71Show/hide
Query:  MATAKTVKDVSPHEFVKAYAAHLKRSGKVELPPWTDIVKTARFKELAPYDADWYYLRAASMARKIYLRGGLGVGAFKRIYGGSKRNGSRPPHFCESSGAI
        MAT KTVKDVSPH+FVKAYA+HLKRSGK+ELP WTDIVKT R KELAPYD DWYY+RAASMARKIYLRGGLGVGAF+RIYGGSKRNGSRPPHFC+SSG I
Subjt:  MATAKTVKDVSPHEFVKAYAAHLKRSGKVELPPWTDIVKTARFKELAPYDADWYYLRAASMARKIYLRGGLGVGAFKRIYGGSKRNGSRPPHFCESSGAI

Query:  ARHILQQLQEMNIVDVDPKGDGRRITSSGRRDLDQVAGRI
        ARHILQQL+ M+IV++D KG GRRITSSG+RDLDQVAGRI
Subjt:  ARHILQQLQEMNIVDVDPKGDGRRITSSGRRDLDQVAGRI

Q9SGA6 40S ribosomal protein S19-18.7e-6784.03Show/hide
Query:  MATAKTVKDVSPHEFVKAYAAHLKRSGKVELPPWTDIVKTARFKELAPYDADWYYLRAASMARKIYLRGGLGVGAFKRIYGGSKRNGSRPPHFCESSGAI
        MAT KTVKDVSPH+FVKAYA+HLKRSGK+ELP WTDIVKT + KELAPYD DWYY+RAASMARK+YLRGGLGVGAF+RIYGGSKRNGSRPPHFC+SSG I
Subjt:  MATAKTVKDVSPHEFVKAYAAHLKRSGKVELPPWTDIVKTARFKELAPYDADWYYLRAASMARKIYLRGGLGVGAFKRIYGGSKRNGSRPPHFCESSGAI

Query:  ARHILQQLQEMNIVDVDPKGDGRRITSSGRRDLDQVAGRIVVAP
        ARHILQQL+ MNIV++D KG GRRITSSG+RDLDQVAGRI V P
Subjt:  ARHILQQLQEMNIVDVDPKGDGRRITSSGRRDLDQVAGRIVVAP

Arabidopsis top hitse value%identityAlignment
AT3G02080.1 Ribosomal protein S19e family protein6.2e-6884.03Show/hide
Query:  MATAKTVKDVSPHEFVKAYAAHLKRSGKVELPPWTDIVKTARFKELAPYDADWYYLRAASMARKIYLRGGLGVGAFKRIYGGSKRNGSRPPHFCESSGAI
        MAT KTVKDVSPH+FVKAYA+HLKRSGK+ELP WTDIVKT + KELAPYD DWYY+RAASMARK+YLRGGLGVGAF+RIYGGSKRNGSRPPHFC+SSG I
Subjt:  MATAKTVKDVSPHEFVKAYAAHLKRSGKVELPPWTDIVKTARFKELAPYDADWYYLRAASMARKIYLRGGLGVGAFKRIYGGSKRNGSRPPHFCESSGAI

Query:  ARHILQQLQEMNIVDVDPKGDGRRITSSGRRDLDQVAGRIVVAP
        ARHILQQL+ MNIV++D KG GRRITSSG+RDLDQVAGRI V P
Subjt:  ARHILQQLQEMNIVDVDPKGDGRRITSSGRRDLDQVAGRIVVAP

AT5G15520.1 Ribosomal protein S19e family protein2.0e-6685.71Show/hide
Query:  MATAKTVKDVSPHEFVKAYAAHLKRSGKVELPPWTDIVKTARFKELAPYDADWYYLRAASMARKIYLRGGLGVGAFKRIYGGSKRNGSRPPHFCESSGAI
        MAT KTVKDVSPH+FVKAYA+HLKRSGK+ELP WTDIVKT R KELAPYD DWYY+RAASMARKIYLRGGLGVGAF+RIYGGSKRNGSRPPHFC+SSG I
Subjt:  MATAKTVKDVSPHEFVKAYAAHLKRSGKVELPPWTDIVKTARFKELAPYDADWYYLRAASMARKIYLRGGLGVGAFKRIYGGSKRNGSRPPHFCESSGAI

Query:  ARHILQQLQEMNIVDVDPKGDGRRITSSGRRDLDQVAGRI
        ARHILQQL+ M+IV++D KG GRRITSSG+RDLDQVAGRI
Subjt:  ARHILQQLQEMNIVDVDPKGDGRRITSSGRRDLDQVAGRI

AT5G61170.1 Ribosomal protein S19e family protein4.7e-6885.31Show/hide
Query:  MATAKTVKDVSPHEFVKAYAAHLKRSGKVELPPWTDIVKTARFKELAPYDADWYYLRAASMARKIYLRGGLGVGAFKRIYGGSKRNGSRPPHFCESSGAI
        MAT KTVKDVSPHEFVKAYAAHLKRSGK+ELP WTDIVKT + KELAPYD DWYY+RAASMARK+YLRGGLGVGAF+RIYGGSKRNGSRPPHFC+SSG +
Subjt:  MATAKTVKDVSPHEFVKAYAAHLKRSGKVELPPWTDIVKTARFKELAPYDADWYYLRAASMARKIYLRGGLGVGAFKRIYGGSKRNGSRPPHFCESSGAI

Query:  ARHILQQLQEMNIVDVDPKGDGRRITSSGRRDLDQVAGRIVVA
        ARHILQQLQ MNIVD+D KG GR+ITSSG+RDLDQVAGRI  A
Subjt:  ARHILQQLQEMNIVDVDPKGDGRRITSSGRRDLDQVAGRIVVA


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGCGACGGCCAAGACTGTGAAAGACGTTTCTCCTCACGAATTTGTGAAGGCCTACGCCGCCCATCTCAAAAGATCCGGAAAGGTTGAACTACCTCCCTGGACTGATAT
TGTTAAAACTGCAAGATTCAAAGAATTAGCACCTTATGATGCTGATTGGTATTATCTGAGAGCTGCGAGCATGGCTAGGAAAATATACTTGAGGGGTGGACTTGGTGTGG
GGGCTTTTAAGCGGATTTATGGTGGAAGCAAGAGGAATGGGAGTCGCCCTCCACATTTCTGTGAAAGCAGTGGTGCTATCGCTCGTCATATTTTACAACAGTTGCAGGAA
ATGAACATTGTTGATGTTGATCCTAAGGGTGATGGTAGGAGAATCACTTCAAGTGGTCGACGGGATCTTGACCAAGTTGCTGGCCGGATCGTTGTTGCTCCTTGA
mRNA sequenceShow/hide mRNA sequence
ATGGCGACGGCCAAGACTGTGAAAGACGTTTCTCCTCACGAATTTGTGAAGGCCTACGCCGCCCATCTCAAAAGATCCGGAAAGGTTGAACTACCTCCCTGGACTGATAT
TGTTAAAACTGCAAGATTCAAAGAATTAGCACCTTATGATGCTGATTGGTATTATCTGAGAGCTGCGAGCATGGCTAGGAAAATATACTTGAGGGGTGGACTTGGTGTGG
GGGCTTTTAAGCGGATTTATGGTGGAAGCAAGAGGAATGGGAGTCGCCCTCCACATTTCTGTGAAAGCAGTGGTGCTATCGCTCGTCATATTTTACAACAGTTGCAGGAA
ATGAACATTGTTGATGTTGATCCTAAGGGTGATGGTAGGAGAATCACTTCAAGTGGTCGACGGGATCTTGACCAAGTTGCTGGCCGGATCGTTGTTGCTCCTTGA
Protein sequenceShow/hide protein sequence
MATAKTVKDVSPHEFVKAYAAHLKRSGKVELPPWTDIVKTARFKELAPYDADWYYLRAASMARKIYLRGGLGVGAFKRIYGGSKRNGSRPPHFCESSGAIARHILQQLQE
MNIVDVDPKGDGRRITSSGRRDLDQVAGRIVVAP