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IVF0019386 (gene) of Melon (IVF77) v1 genome

Gene IDIVF0019386
OrganismCucumis melo ssp. agrestis cv. IVF77 (Melon (IVF77) v1)
DescriptionRetrotransposon protein
Genome locationchr12:14780249..14780526
RNA-Seq ExpressionIVF0019386
SyntenyIVF0019386
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0037008.1 subtilisin-like protease SBT3.17 isoform X1 [Cucumis melo var. makuwa]6.95e-1852.75Show/hide
Query:  AQMIKVICNVMEFVKDQLKTIVEWSKEQRQVEDEYGSNFQKQLRP------------MRIIMYNVQDMKEFLRIPTKIILEYCTVLLEDNA
        A++++VI N MEF+ +QLKTI E  K+QRQ EDEY +   KQL+             MRIIM++ QDM+ FL IPT++ LEYCTVLLE+NA
Subjt:  AQMIKVICNVMEFVKDQLKTIVEWSKEQRQVEDEYGSNFQKQLRP------------MRIIMYNVQDMKEFLRIPTKIILEYCTVLLEDNA

KAA0059863.1 retrotransposon protein [Cucumis melo var. makuwa]3.82e-2659.78Show/hide
Query:  MAQMIKVICNVMEFVKDQLKTIVEWSKEQRQVEDEYGSNFQKQL------------RPMRIIMYNVQDMKEFLRIPTKIILEYCTVLLEDNA
        MA+ ++VICN MEFV D+LKTI EW KEQRQ ED+YG  + KQL            R M+IIM++V DMK FLRIP ++ LEYCTVLLEDNA
Subjt:  MAQMIKVICNVMEFVKDQLKTIVEWSKEQRQVEDEYGSNFQKQL------------RPMRIIMYNVQDMKEFLRIPTKIILEYCTVLLEDNA

KAA0065601.1 retrotransposon protein [Cucumis melo var. makuwa]1.77e-1039.77Show/hide
Query:  IKVICNVMEFVKDQLKTIVEWSKEQRQVEDEYGSNFQKQL------------RPMRIIMYNVQDMKEFLRIPTKIILEYCTVLLEDNA
        +K+ICN +E+   QLK I + S  QRQ +D   +    QL            R + IIM+NV +M+ FL +P ++ L+YCT +LEDNA
Subjt:  IKVICNVMEFVKDQLKTIVEWSKEQRQVEDEYGSNFQKQL------------RPMRIIMYNVQDMKEFLRIPTKIILEYCTVLLEDNA

KAE8646815.1 hypothetical protein Csa_005367, partial [Cucumis sativus]2.78e-1045.98Show/hide
Query:  IKVICNVMEFVKDQLKTIVEWSKEQRQVEDEYGSNFQKQLRP------------MRIIMYNVQDMKEFLRIPTKIILEYCTVLLEDN
        + VI N ME   DQLK I  WSKE+R  E E      KQL+             M+II + V D++ FL  PTK+ LEYC VLLEDN
Subjt:  IKVICNVMEFVKDQLKTIVEWSKEQRQVEDEYGSNFQKQLRP------------MRIIMYNVQDMKEFLRIPTKIILEYCTVLLEDN

TYK07171.1 retrotransposon protein [Cucumis melo var. makuwa]1.77e-1039.77Show/hide
Query:  IKVICNVMEFVKDQLKTIVEWSKEQRQVEDEYGSNFQKQL------------RPMRIIMYNVQDMKEFLRIPTKIILEYCTVLLEDNA
        +K+ICN +E+   QLK I + S  QRQ +D   +    QL            R + IIM+NV +M+ FL +P ++ L+YCT +LEDNA
Subjt:  IKVICNVMEFVKDQLKTIVEWSKEQRQVEDEYGSNFQKQL------------RPMRIIMYNVQDMKEFLRIPTKIILEYCTVLLEDNA

TrEMBL top hitse value%identityAlignment
A0A5A7T2J7 Subtilisin-like protease SBT3.17 isoform X11.1e-1352.75Show/hide
Query:  AQMIKVICNVMEFVKDQLKTIVEWSKEQRQVEDEYGSNFQKQLRP------------MRIIMYNVQDMKEFLRIPTKIILEYCTVLLEDNA
        A++++VI N MEF+ +QLKTI E  K+QRQ EDEY +   KQL+             MRIIM++ QDM+ FL IPT++ LEYCTVLLE+NA
Subjt:  AQMIKVICNVMEFVKDQLKTIVEWSKEQRQVEDEYGSNFQKQLRP------------MRIIMYNVQDMKEFLRIPTKIILEYCTVLLEDNA

A0A5A7UV97 Retrotransposon protein3.9e-1959.78Show/hide
Query:  MAQMIKVICNVMEFVKDQLKTIVEWSKEQRQVEDEYGSNFQKQL------------RPMRIIMYNVQDMKEFLRIPTKIILEYCTVLLEDNA
        MA+ ++VICN MEFV D+LKTI EW KEQRQ ED+YG  + KQL            R M+IIM++V DMK FLRIP ++ LEYCTVLLEDNA
Subjt:  MAQMIKVICNVMEFVKDQLKTIVEWSKEQRQVEDEYGSNFQKQL------------RPMRIIMYNVQDMKEFLRIPTKIILEYCTVLLEDNA

A0A5A7VIQ2 Retrotransposon protein1.5e-0738.89Show/hide
Query:  QMIKVICNVMEFVKDQLKTIVEWSKEQRQVEDEYGSNFQKQL------------RPMRIIMYNVQDMKEFLRIPTKIILEYCTVLLEDNA
        + +K+ICN +E+   QLK I + S  QRQ +D   +    QL            R + IIM+NV +M+ FL +P ++ L+YCT +LEDNA
Subjt:  QMIKVICNVMEFVKDQLKTIVEWSKEQRQVEDEYGSNFQKQL------------RPMRIIMYNVQDMKEFLRIPTKIILEYCTVLLEDNA

A0A5D3BZU3 Retrotransposon protein1.5e-0741.57Show/hide
Query:  QMIKVICNVMEFVKDQLKTIVEWSKEQRQVEDEYGSNFQKQLRP------------MRIIMYNVQDMKEFLRIPTKIILEYCTVLLEDN
        +M++VI +  EF  DQLKTI +W KE+R  E E  +   KQL+             M+I+  +V+ ++ FL IPTK+ LEYC +LLE+N
Subjt:  QMIKVICNVMEFVKDQLKTIVEWSKEQRQVEDEYGSNFQKQLRP------------MRIIMYNVQDMKEFLRIPTKIILEYCTVLLEDN

A0A5D3C5I7 Retrotransposon protein1.5e-0738.89Show/hide
Query:  QMIKVICNVMEFVKDQLKTIVEWSKEQRQVEDEYGSNFQKQL------------RPMRIIMYNVQDMKEFLRIPTKIILEYCTVLLEDNA
        + +K+ICN +E+   QLK I + S  QRQ +D   +    QL            R + IIM+NV +M+ FL +P ++ L+YCT +LEDNA
Subjt:  QMIKVICNVMEFVKDQLKTIVEWSKEQRQVEDEYGSNFQKQL------------RPMRIIMYNVQDMKEFLRIPTKIILEYCTVLLEDNA

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGCTCAAATGATCAAGGTCATTTGCAATGTAATGGAATTCGTGAAGGACCAGTTGAAGACCATTGTAGAATGGTCAAAAGAGCAACGTCAAGTAGAGGACGAATATGG
TTCAAATTTTCAAAAACAGCTGCGGCCTATGCGAATCATAATGTACAATGTCCAAGACATGAAAGAATTCTTGAGGATACCTACAAAGATTATATTGGAGTACTGCACTG
TGCTACTAGAAGATAACGCTTGA
mRNA sequenceShow/hide mRNA sequence
ATGGCTCAAATGATCAAGGTCATTTGCAATGTAATGGAATTCGTGAAGGACCAGTTGAAGACCATTGTAGAATGGTCAAAAGAGCAACGTCAAGTAGAGGACGAATATGG
TTCAAATTTTCAAAAACAGCTGCGGCCTATGCGAATCATAATGTACAATGTCCAAGACATGAAAGAATTCTTGAGGATACCTACAAAGATTATATTGGAGTACTGCACTG
TGCTACTAGAAGATAACGCTTGA
Protein sequenceShow/hide protein sequence
MAQMIKVICNVMEFVKDQLKTIVEWSKEQRQVEDEYGSNFQKQLRPMRIIMYNVQDMKEFLRIPTKIILEYCTVLLEDNA