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IVF0019403 (gene) of Melon (IVF77) v1 genome

Gene IDIVF0019403
OrganismCucumis melo ssp. agrestis cv. IVF77 (Melon (IVF77) v1)
DescriptionRT_RNaseH domain-containing protein
Genome locationchr11:14337913..14338376
RNA-Seq ExpressionIVF0019403
SyntenyIVF0019403
Gene Ontology termsGO:0003676 - nucleic acid binding (molecular function)
InterPro domainsIPR021109 - Aspartic peptidase domain superfamily


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0042146.1 uncharacterized protein E6C27_scaffold67G006360 [Cucumis melo var. makuwa]1.85e-4561.59Show/hide
Query:  MNDYEVVALTQATSDFFKKGVRKKMTNRGRFTVPCSIGGMDLGRALCDLGASINLMSLSIFKKLGIGEVQPTQMVPQFANRSISRPEDKIEDVLVKVDKF
        MND+E VALTQA  D FK GV +KMT  G F VPCSIGGMDLG A C+L A+INL+ LSIFKKLGIGEVQPTQM  Q  ++SI+RP+ KIE+VLVKVDKF
Subjt:  MNDYEVVALTQATSDFFKKGVRKKMTNRGRFTVPCSIGGMDLGRALCDLGASINLMSLSIFKKLGIGEVQPTQMVPQFANRSISRPEDKIEDVLVKVDKF

Query:  FSHR----------------LWWLFLLIGRALIDVYQG
          H                 L W FL IGRALI+V+QG
Subjt:  FSHR----------------LWWLFLLIGRALIDVYQG

KAA0062776.1 uncharacterized protein E6C27_scaffold382G001190 [Cucumis melo var. makuwa]1.33e-4359.86Show/hide
Query:  MNDYEVVALTQATSDFFKKGVRKKMTNRGRFTVPCSIGGMDLGRALCDLGASINLMSLSIFKKLGIGEVQPTQMVPQFANRSISRPEDKIEDVLVKVDKF
        MN+YE V LTQATS+ FK  V+KKMT    FTV CSI  MDLG  LC+LGASINLM LSIFKKLG+ E QPT+MV QF +RSI+R E KI+DVL+KVDKF
Subjt:  MNDYEVVALTQATSDFFKKGVRKKMTNRGRFTVPCSIGGMDLGRALCDLGASINLMSLSIFKKLGIGEVQPTQMVPQFANRSISRPEDKIEDVLVKVDKF

Query:  F-----------SHR-----LWWLFLLIGRALIDVYQGELTMQLNDQ
                    + R     L   FL  G ALIDV+Q ELTM LNDQ
Subjt:  F-----------SHR-----LWWLFLLIGRALIDVYQGELTMQLNDQ

TYK14619.1 integrase [Cucumis melo var. makuwa]3.85e-64100Show/hide
Query:  MNDYEVVALTQATSDFFKKGVRKKMTNRGRFTVPCSIGGMDLGRALCDLGASINLMSLSIFKKLGIGEVQPTQMVPQFANRSISRPEDKIEDVLVKVDKF
        MNDYEVVALTQATSDFFKKGVRKKMTNRGRFTVPCSIGGMDLGRALCDLGASINLMSLSIFKKLGIGEVQPTQMVPQFANRSISRPEDKIEDVLVKVDKF
Subjt:  MNDYEVVALTQATSDFFKKGVRKKMTNRGRFTVPCSIGGMDLGRALCDLGASINLMSLSIFKKLGIGEVQPTQMVPQFANRSISRPEDKIEDVLVKVDKF

Query:  FSHRL
        FSHRL
Subjt:  FSHRL

XP_008455795.1 PREDICTED: uncharacterized protein LOC103495890 [Cucumis melo]1.25e-4460.54Show/hide
Query:  MNDYEVVALTQATSDFFKKGVRKKMTNRGRFTVPCSIGGMDLGRALCDLGASINLMSLSIFKKLGIGEVQPTQMVPQFANRSISRPEDKIEDVLVKVDKF
        MN+YE V LTQATS+ FK  V+KKMT    FTV CSI  MDLG  LC+LGASINLM LSIFKKLG+ E QPT+MV QF +RSI+RPE KI+DVL+KVDKF
Subjt:  MNDYEVVALTQATSDFFKKGVRKKMTNRGRFTVPCSIGGMDLGRALCDLGASINLMSLSIFKKLGIGEVQPTQMVPQFANRSISRPEDKIEDVLVKVDKF

Query:  F-----------SHR-----LWWLFLLIGRALIDVYQGELTMQLNDQ
                    + R     L   FL  G ALIDV+Q ELTM LNDQ
Subjt:  F-----------SHR-----LWWLFLLIGRALIDVYQGELTMQLNDQ

XP_008465121.1 PREDICTED: uncharacterized protein LOC103502805 [Cucumis melo]3.42e-4358.22Show/hide
Query:  NDYEVVALTQATSDFFKKGVRKKMTNRGRFTVPCSIGGMDLGRALCDLGASINLMSLSIFKKLGIGEVQPTQMVPQFANRSISRPEDKIEDVLVKVDKFF
        ND E VALT  TSD  K G  KKMT+   FTVPCSI  MDLG  LCDLGASINLM LSIFKKL I EVQP  M  QF +RSI++ E KIED+LVKVDKF 
Subjt:  NDYEVVALTQATSDFFKKGVRKKMTNRGRFTVPCSIGGMDLGRALCDLGASINLMSLSIFKKLGIGEVQPTQMVPQFANRSISRPEDKIEDVLVKVDKFF

Query:  SHRLWWL----------------FLLIGRALIDVYQGELTMQLNDQ
         H  + +                FL  G ALIDV+QGELTM+ ND+
Subjt:  SHRLWWL----------------FLLIGRALIDVYQGELTMQLNDQ

TrEMBL top hitse value%identityAlignment
A0A1S3C2F1 uncharacterized protein LOC1034958902.0e-3460.54Show/hide
Query:  MNDYEVVALTQATSDFFKKGVRKKMTNRGRFTVPCSIGGMDLGRALCDLGASINLMSLSIFKKLGIGEVQPTQMVPQFANRSISRPEDKIEDVLVKVDKF
        MN+YE V LTQATS+ FK  V+KKMT    FTV CSI  MDLG  LC+LGASINLM LSIFKKLG+ E QPT+MV QF +RSI+RPE KI+DVL+KVDKF
Subjt:  MNDYEVVALTQATSDFFKKGVRKKMTNRGRFTVPCSIGGMDLGRALCDLGASINLMSLSIFKKLGIGEVQPTQMVPQFANRSISRPEDKIEDVLVKVDKF

Query:  F-----------SHR-----LWWLFLLIGRALIDVYQGELTMQLNDQ
                    + R     L   FL  G ALIDV+Q ELTM LNDQ
Subjt:  F-----------SHR-----LWWLFLLIGRALIDVYQGELTMQLNDQ

A0A5A7V8K1 Uncharacterized protein2.2e-3359.86Show/hide
Query:  MNDYEVVALTQATSDFFKKGVRKKMTNRGRFTVPCSIGGMDLGRALCDLGASINLMSLSIFKKLGIGEVQPTQMVPQFANRSISRPEDKIEDVLVKVDKF
        MN+YE V LTQATS+ FK  V+KKMT    FTV CSI  MDLG  LC+LGASINLM LSIFKKLG+ E QPT+MV QF +RSI+R E KI+DVL+KVDKF
Subjt:  MNDYEVVALTQATSDFFKKGVRKKMTNRGRFTVPCSIGGMDLGRALCDLGASINLMSLSIFKKLGIGEVQPTQMVPQFANRSISRPEDKIEDVLVKVDKF

Query:  F-----------SHR-----LWWLFLLIGRALIDVYQGELTMQLNDQ
                    + R     L   FL  G ALIDV+Q ELTM LNDQ
Subjt:  F-----------SHR-----LWWLFLLIGRALIDVYQGELTMQLNDQ

A0A5A7VJ95 Uncharacterized protein2.8e-3358.22Show/hide
Query:  NDYEVVALTQATSDFFKKGVRKKMTNRGRFTVPCSIGGMDLGRALCDLGASINLMSLSIFKKLGIGEVQPTQMVPQFANRSISRPEDKIEDVLVKVDKFF
        ND E VALT  TSD  K G  KKMT+   FTVPCSI  MDLG  LCDLGASINLM LSIFKKL I EVQP  M  QF +RSI++ E KIED+LVKVDKF 
Subjt:  NDYEVVALTQATSDFFKKGVRKKMTNRGRFTVPCSIGGMDLGRALCDLGASINLMSLSIFKKLGIGEVQPTQMVPQFANRSISRPEDKIEDVLVKVDKFF

Query:  SHRLWWL----------------FLLIGRALIDVYQGELTMQLNDQ
         H  + +                FL  G ALIDV+QGELTM+ ND+
Subjt:  SHRLWWL----------------FLLIGRALIDVYQGELTMQLNDQ

A0A5D3CWH6 Integrase7.9e-52100Show/hide
Query:  MNDYEVVALTQATSDFFKKGVRKKMTNRGRFTVPCSIGGMDLGRALCDLGASINLMSLSIFKKLGIGEVQPTQMVPQFANRSISRPEDKIEDVLVKVDKF
        MNDYEVVALTQATSDFFKKGVRKKMTNRGRFTVPCSIGGMDLGRALCDLGASINLMSLSIFKKLGIGEVQPTQMVPQFANRSISRPEDKIEDVLVKVDKF
Subjt:  MNDYEVVALTQATSDFFKKGVRKKMTNRGRFTVPCSIGGMDLGRALCDLGASINLMSLSIFKKLGIGEVQPTQMVPQFANRSISRPEDKIEDVLVKVDKF

Query:  FSHRL
        FSHRL
Subjt:  FSHRL

A0A5D3DSI6 Uncharacterized protein1.5e-3461.59Show/hide
Query:  MNDYEVVALTQATSDFFKKGVRKKMTNRGRFTVPCSIGGMDLGRALCDLGASINLMSLSIFKKLGIGEVQPTQMVPQFANRSISRPEDKIEDVLVKVDKF
        MND+E VALTQA  D FK GV +KMT  G F VPCSIGGMDLG A C+L A+INL+ LSIFKKLGIGEVQPTQM  Q  ++SI+RP+ KIE+VLVKVDKF
Subjt:  MNDYEVVALTQATSDFFKKGVRKKMTNRGRFTVPCSIGGMDLGRALCDLGASINLMSLSIFKKLGIGEVQPTQMVPQFANRSISRPEDKIEDVLVKVDKF

Query:  FSHR----------------LWWLFLLIGRALIDVYQG
          H                 L W FL IGRALI+V+QG
Subjt:  FSHR----------------LWWLFLLIGRALIDVYQG

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGAATGATTATGAGGTGGTAGCTCTGACGCAGGCAACAAGCGACTTCTTCAAGAAAGGGGTACGAAAGAAGATGACAAATCGTGGAAGGTTCACTGTACCATGCTCAAT
AGGCGGTATGGATCTTGGTCGTGCACTATGTGACTTGGGAGCAAGCATTAATTTAATGTCTCTCTCTATCTTCAAGAAATTAGGGATAGGGGAGGTTCAGCCTACACAAA
TGGTACCCCAGTTTGCTAATAGATCCATTTCGCGGCCTGAGGACAAGATTGAAGATGTACTGGTTAAGGTGGACAAGTTTTTTTCCCACAGACTTTGGTGGCTATTTCTA
TTAATAGGTCGTGCTCTTATAGATGTCTACCAAGGGGAATTGACCATGCAACTTAATGACCAAAATAGAGAGAGACATAACTCATTCTGA
mRNA sequenceShow/hide mRNA sequence
ATGAATGATTATGAGGTGGTAGCTCTGACGCAGGCAACAAGCGACTTCTTCAAGAAAGGGGTACGAAAGAAGATGACAAATCGTGGAAGGTTCACTGTACCATGCTCAAT
AGGCGGTATGGATCTTGGTCGTGCACTATGTGACTTGGGAGCAAGCATTAATTTAATGTCTCTCTCTATCTTCAAGAAATTAGGGATAGGGGAGGTTCAGCCTACACAAA
TGGTACCCCAGTTTGCTAATAGATCCATTTCGCGGCCTGAGGACAAGATTGAAGATGTACTGGTTAAGGTGGACAAGTTTTTTTCCCACAGACTTTGGTGGCTATTTCTA
TTAATAGGTCGTGCTCTTATAGATGTCTACCAAGGGGAATTGACCATGCAACTTAATGACCAAAATAGAGAGAGACATAACTCATTCTGA
Protein sequenceShow/hide protein sequence
MNDYEVVALTQATSDFFKKGVRKKMTNRGRFTVPCSIGGMDLGRALCDLGASINLMSLSIFKKLGIGEVQPTQMVPQFANRSISRPEDKIEDVLVKVDKFFSHRLWWLFL
LIGRALIDVYQGELTMQLNDQNRERHNSF