; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

IVF0019406 (gene) of Melon (IVF77) v1 genome

Gene IDIVF0019406
OrganismCucumis melo ssp. agrestis cv. IVF77 (Melon (IVF77) v1)
DescriptionRetrovirus-related Pol polyprotein from transposon TNT 1-94
Genome locationchr06:17729985..17730446
RNA-Seq ExpressionIVF0019406
SyntenyIVF0019406
Gene Ontology termsGO:0044237 - cellular metabolic process (biological process)
GO:0046872 - metal ion binding (molecular function)
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0060586.1 putative gag protein [Cucumis melo var. makuwa]1.89e-101100Show/hide
Query:  MGKETLPVGRQRKRPLLDNKKTLKAIMDPKELPKTVTKEQMEEMESAPYGTIVLYLSDNVLTEIIDKETTYEIWVKLEEMYLTRDLSNRAYLGEKFFTYN
        MGKETLPVGRQRKRPLLDNKKTLKAIMDPKELPKTVTKEQMEEMESAPYGTIVLYLSDNVLTEIIDKETTYEIWVKLEEMYLTRDLSNRAYLGEKFFTYN
Subjt:  MGKETLPVGRQRKRPLLDNKKTLKAIMDPKELPKTVTKEQMEEMESAPYGTIVLYLSDNVLTEIIDKETTYEIWVKLEEMYLTRDLSNRAYLGEKFFTYN

Query:  MDSNESLTDTLSEFKKLSTEFQSLGDQIDEENETFFLLNSLSDEYREVNVALK
        MDSNESLTDTLSEFKKLSTEFQSLGDQIDEENETFFLLNSLSDEYREVNVALK
Subjt:  MDSNESLTDTLSEFKKLSTEFQSLGDQIDEENETFFLLNSLSDEYREVNVALK

TYK02285.1 putative gag protein [Cucumis melo var. makuwa]9.79e-95100Show/hide
Query:  MGKETLPVGRQRKRPLLDNKKTLKAIMDPKELPKTVTKEQMEEMESAPYGTIVLYLSDNVLTEIIDKETTYEIWVKLEEMYLTRDLSNRAYLGEKFFTYN
        MGKETLPVGRQRKRPLLDNKKTLKAIMDPKELPKTVTKEQMEEMESAPYGTIVLYLSDNVLTEIIDKETTYEIWVKLEEMYLTRDLSNRAYLGEKFFTYN
Subjt:  MGKETLPVGRQRKRPLLDNKKTLKAIMDPKELPKTVTKEQMEEMESAPYGTIVLYLSDNVLTEIIDKETTYEIWVKLEEMYLTRDLSNRAYLGEKFFTYN

Query:  MDSNESLTDTLSEFKKLSTEFQSLGDQIDEENETFFLLNSLSDEYRE
        MDSNESLTDTLSEFKKLSTEFQSLGDQIDEENETFFLLNSLSDEYRE
Subjt:  MDSNESLTDTLSEFKKLSTEFQSLGDQIDEENETFFLLNSLSDEYRE

XP_038885928.1 uncharacterized protein LOC120076236 [Benincasa hispida]4.18e-4052.17Show/hide
Query:  LLDNKKTLKAIMDPKELPKTVTKEQMEEMESAPYGTIVLYLSDNVLTEIIDKETTYEIWVKLEEMYLTRDLSNRAYLGEKFFTYNMDSNESLTDTLSEFK
        +L  +K L AI DP + PK + K + E +ES  YGTIVL + D+VL +I+D+ T Y +W KL ++YL +DL N+A+L E+FFTY MD  +SLTD L+EFK
Subjt:  LLDNKKTLKAIMDPKELPKTVTKEQMEEMESAPYGTIVLYLSDNVLTEIIDKETTYEIWVKLEEMYLTRDLSNRAYLGEKFFTYNMDSNESLTDTLSEFK

Query:  KLSTEFQSLGDQIDEENETFFLLNSLSDEYREVNVALK
         LS++F+S+GD I EENE F LLNSL + +++V  ALK
Subjt:  KLSTEFQSLGDQIDEENETFFLLNSLSDEYREVNVALK

XP_038887098.1 uncharacterized protein LOC120077280 [Benincasa hispida]2.40e-4050Show/hide
Query:  LLDNKKTLKAIMDPKELPKTVTKEQMEEMESAPYGTIVLYLSDNVLTEIIDKETTYEIWVKLEEMYLTRDLSNRAYLGEKFFTYNMDSNESLTDTLSEFK
        +L  +K L AI DP + P+T+++ + E +ES  YGTI+L ++D+VL +I+D+ T Y +W KL E+YL +D  N+ +L E+FFTY MD  +SLTD L+EFK
Subjt:  LLDNKKTLKAIMDPKELPKTVTKEQMEEMESAPYGTIVLYLSDNVLTEIIDKETTYEIWVKLEEMYLTRDLSNRAYLGEKFFTYNMDSNESLTDTLSEFK

Query:  KLSTEFQSLGDQIDEENETFFLLNSLSDEYREVNVALK
        +LS+EF+S+GD I EENE F L NSL + +++V  ALK
Subjt:  KLSTEFQSLGDQIDEENETFFLLNSLSDEYREVNVALK

XP_038890043.1 uncharacterized protein LOC120079747 [Benincasa hispida]1.18e-3950.72Show/hide
Query:  LLDNKKTLKAIMDPKELPKTVTKEQMEEMESAPYGTIVLYLSDNVLTEIIDKETTYEIWVKLEEMYLTRDLSNRAYLGEKFFTYNMDSNESLTDTLSEFK
        +L  +K L AI DP + P+T+T+ + E +E    GTIVL ++DNVL ++I++ T Y +W KL E+YL +DLSN+A+L E+FFTY MD+ +SLTD L+EFK
Subjt:  LLDNKKTLKAIMDPKELPKTVTKEQMEEMESAPYGTIVLYLSDNVLTEIIDKETTYEIWVKLEEMYLTRDLSNRAYLGEKFFTYNMDSNESLTDTLSEFK

Query:  KLSTEFQSLGDQIDEENETFFLLNSLSDEYREVNVALK
        +LS+EF+S+G  I EENE F LLNSL + +++   A+K
Subjt:  KLSTEFQSLGDQIDEENETFFLLNSLSDEYREVNVALK

TrEMBL top hitse value%identityAlignment
A0A5A7V269 Putative gag protein6.0e-77100Show/hide
Query:  MGKETLPVGRQRKRPLLDNKKTLKAIMDPKELPKTVTKEQMEEMESAPYGTIVLYLSDNVLTEIIDKETTYEIWVKLEEMYLTRDLSNRAYLGEKFFTYN
        MGKETLPVGRQRKRPLLDNKKTLKAIMDPKELPKTVTKEQMEEMESAPYGTIVLYLSDNVLTEIIDKETTYEIWVKLEEMYLTRDLSNRAYLGEKFFTYN
Subjt:  MGKETLPVGRQRKRPLLDNKKTLKAIMDPKELPKTVTKEQMEEMESAPYGTIVLYLSDNVLTEIIDKETTYEIWVKLEEMYLTRDLSNRAYLGEKFFTYN

Query:  MDSNESLTDTLSEFKKLSTEFQSLGDQIDEENETFFLLNSLSDEYREVNVALK
        MDSNESLTDTLSEFKKLSTEFQSLGDQIDEENETFFLLNSLSDEYREVNVALK
Subjt:  MDSNESLTDTLSEFKKLSTEFQSLGDQIDEENETFFLLNSLSDEYREVNVALK

A0A5C7GU35 Protein FAR1-RELATED SEQUENCE4.8e-2642.86Show/hide
Query:  GKETLPVGRQRKRPLLDNKKTLKAIMDPKELPKTVTKEQMEEMESAPYGTIVLYLSDNVLTEIIDKETTYEIWVKLEEMYLTRDLSNRAYLGEKFFTYNM
        G   L + R++ + LL  +K LKAI  P++LP ++TKEQ  +M     GTI+L LSDNVL E+ D++T  ++W KLE +YLT+ L+N+ YL E+ F + M
Subjt:  GKETLPVGRQRKRPLLDNKKTLKAIMDPKELPKTVTKEQMEEMESAPYGTIVLYLSDNVLTEIIDKETTYEIWVKLEEMYLTRDLSNRAYLGEKFFTYNM

Query:  DSNESLTDTLSEFKKLSTEFQSLG--DQIDEENETFFLLNSLSDEYREVNVALK
        D+++ L + L +FKK+  E  + G  +++ +ENET  LLNSL D +++V  A+K
Subjt:  DSNESLTDTLSEFKKLSTEFQSLG--DQIDEENETFFLLNSLSDEYREVNVALK

A0A5C7GXL9 Sucrose-phosphate phosphatase1.2e-2441.56Show/hide
Query:  GKETLPVGRQRKRPLLDNKKTLKAIMDPKELPKTVTKEQMEEMESAPYGTIVLYLSDNVLTEIIDKETTYEIWVKLEEMYLTRDLSNRAYLGEKFFTYNM
        G     + R++ + LL  +K LKAI  P++LP ++T EQ ++M     GTI+L LSDNVL EI D++T  ++W KLE +YLT+ L+N+ YL E+ F + M
Subjt:  GKETLPVGRQRKRPLLDNKKTLKAIMDPKELPKTVTKEQMEEMESAPYGTIVLYLSDNVLTEIIDKETTYEIWVKLEEMYLTRDLSNRAYLGEKFFTYNM

Query:  DSNESLTDTLSEFKKLSTEFQSLG--DQIDEENETFFLLNSLSDEYREVNVALK
        D+++ L   L +FKK++ E  + G  +++ +ENE   LLNSL D +++V  A+K
Subjt:  DSNESLTDTLSEFKKLSTEFQSLG--DQIDEENETFFLLNSLSDEYREVNVALK

A0A5C7H9Q4 Uncharacterized protein2.4e-2541.56Show/hide
Query:  GKETLPVGRQRKRPLLDNKKTLKAIMDPKELPKTVTKEQMEEMESAPYGTIVLYLSDNVLTEIIDKETTYEIWVKLEEMYLTRDLSNRAYLGEKFFTYNM
        G     + R++ + LL  +K LK I  P++LP ++T EQ  +M     GTI+L LSDNVL E+ D++T+  +W+KLE +YLT+ L+N+ YL EK F + M
Subjt:  GKETLPVGRQRKRPLLDNKKTLKAIMDPKELPKTVTKEQMEEMESAPYGTIVLYLSDNVLTEIIDKETTYEIWVKLEEMYLTRDLSNRAYLGEKFFTYNM

Query:  DSNESLTDTLSEFKKLSTEFQSLG--DQIDEENETFFLLNSLSDEYREVNVALK
        D+++ L + L +FKK++ E  + G  +++ +ENE F LLNSL D +++V  A+K
Subjt:  DSNESLTDTLSEFKKLSTEFQSLG--DQIDEENETFFLLNSLSDEYREVNVALK

A0A5D3BSZ6 Putative gag protein1.1e-73100Show/hide
Query:  MGKETLPVGRQRKRPLLDNKKTLKAIMDPKELPKTVTKEQMEEMESAPYGTIVLYLSDNVLTEIIDKETTYEIWVKLEEMYLTRDLSNRAYLGEKFFTYN
        MGKETLPVGRQRKRPLLDNKKTLKAIMDPKELPKTVTKEQMEEMESAPYGTIVLYLSDNVLTEIIDKETTYEIWVKLEEMYLTRDLSNRAYLGEKFFTYN
Subjt:  MGKETLPVGRQRKRPLLDNKKTLKAIMDPKELPKTVTKEQMEEMESAPYGTIVLYLSDNVLTEIIDKETTYEIWVKLEEMYLTRDLSNRAYLGEKFFTYN

Query:  MDSNESLTDTLSEFKKLSTEFQSLGDQIDEENETFFLLNSLSDEYRE
        MDSNESLTDTLSEFKKLSTEFQSLGDQIDEENETFFLLNSLSDEYRE
Subjt:  MDSNESLTDTLSEFKKLSTEFQSLGDQIDEENETFFLLNSLSDEYRE

SwissProt top hitse value%identityAlignment
P10978 Retrovirus-related Pol polyprotein from transposon TNT 1-944.5e-1331.62Show/hide
Query:  RQRKRPLLDNKKTLKAIMDPKELPKTVTKEQMEEMESAPYGTIVLYLSDNVLTEIIDKETTYEIWVKLEEMYLTRDLSNRAYLGEKFFTYNMDSNESLTD
        ++R R LL  +   K +    + P T+  E   +++      I L+LSD+V+  IID++T   IW +LE +Y+++ L+N+ YL ++ +  +M    +   
Subjt:  RQRKRPLLDNKKTLKAIMDPKELPKTVTKEQMEEMESAPYGTIVLYLSDNVLTEIIDKETTYEIWVKLEEMYLTRDLSNRAYLGEKFFTYNMDSNESLTD

Query:  TLSEFKKLSTEFQSLGDQIDEENETFFLLNSLSDEY
         L+ F  L T+  +LG +I+EE++   LLNSL   Y
Subjt:  TLSEFKKLSTEFQSLGDQIDEENETFFLLNSLSDEY

Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGGAAAGGAGACTTTGCCTGTTGGAAGGCAAAGGAAAAGGCCACTTTTAGACAACAAAAAGACATTGAAAGCCATAATGGATCCTAAAGAACTTCCTAAAACTGTGAC
CAAAGAACAGATGGAAGAGATGGAGAGTGCACCGTACGGTACCATTGTTTTATATTTGAGTGATAATGTTTTGACAGAAATAATTGATAAAGAAACAACATATGAAATAT
GGGTGAAATTAGAAGAAATGTATCTTACAAGGGATCTATCTAATCGTGCATACCTTGGAGAAAAGTTCTTTACCTATAATATGGATTCTAATGAATCCTTGACTGACACC
CTAAGTGAATTCAAGAAGCTGTCCACTGAATTCCAGAGCTTAGGCGATCAAATAGATGAAGAAAATGAGACTTTCTTCTTGTTAAACTCCCTTTCAGATGAATATAGAGA
GGTCAATGTGGCACTCAAGTAG
mRNA sequenceShow/hide mRNA sequence
ATGGGAAAGGAGACTTTGCCTGTTGGAAGGCAAAGGAAAAGGCCACTTTTAGACAACAAAAAGACATTGAAAGCCATAATGGATCCTAAAGAACTTCCTAAAACTGTGAC
CAAAGAACAGATGGAAGAGATGGAGAGTGCACCGTACGGTACCATTGTTTTATATTTGAGTGATAATGTTTTGACAGAAATAATTGATAAAGAAACAACATATGAAATAT
GGGTGAAATTAGAAGAAATGTATCTTACAAGGGATCTATCTAATCGTGCATACCTTGGAGAAAAGTTCTTTACCTATAATATGGATTCTAATGAATCCTTGACTGACACC
CTAAGTGAATTCAAGAAGCTGTCCACTGAATTCCAGAGCTTAGGCGATCAAATAGATGAAGAAAATGAGACTTTCTTCTTGTTAAACTCCCTTTCAGATGAATATAGAGA
GGTCAATGTGGCACTCAAGTAG
Protein sequenceShow/hide protein sequence
MGKETLPVGRQRKRPLLDNKKTLKAIMDPKELPKTVTKEQMEEMESAPYGTIVLYLSDNVLTEIIDKETTYEIWVKLEEMYLTRDLSNRAYLGEKFFTYNMDSNESLTDT
LSEFKKLSTEFQSLGDQIDEENETFFLLNSLSDEYREVNVALK