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IVF0019408 (gene) of Melon (IVF77) v1 genome

Gene IDIVF0019408
OrganismCucumis melo ssp. agrestis cv. IVF77 (Melon (IVF77) v1)
DescriptionCCHC-type domain-containing protein
Genome locationchr08:29894180..29894539
RNA-Seq ExpressionIVF0019408
SyntenyIVF0019408
Gene Ontology termsGO:0015074 - DNA integration (biological process)
GO:0003676 - nucleic acid binding (molecular function)
GO:0008270 - zinc ion binding (molecular function)
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0045055.1 uncharacterized protein E6C27_scaffold30G00450 [Cucumis melo var. makuwa]9.26e-79100Show/hide
Query:  MTTAKQVWDALQMKYDTEEAGSKKYAVSQYLRYQMTDDKSVEAQSHGIQKIAHEIISEGMPLVDQFQVAVIIDKLPLLWKDFKNTLRHKTKEFSLKILIE
        MTTAKQVWDALQMKYDTEEAGSKKYAVSQYLRYQMTDDKSVEAQSHGIQKIAHEIISEGMPLVDQFQVAVIIDKLPLLWKDFKNTLRHKTKEFSLKILIE
Subjt:  MTTAKQVWDALQMKYDTEEAGSKKYAVSQYLRYQMTDDKSVEAQSHGIQKIAHEIISEGMPLVDQFQVAVIIDKLPLLWKDFKNTLRHKTKEFSLKILIE

Query:  VLTGKSNHETKDRGGSKEA
        VLTGKSNHETKDRGGSKEA
Subjt:  VLTGKSNHETKDRGGSKEA

KAA0060458.1 uncharacterized protein E6C27_scaffold22G002860 [Cucumis melo var. makuwa]1.06e-5489.22Show/hide
Query:  MTTAKQVWDALQMKYDTEEAGSKKYAVSQYLRYQMTDDKSVEAQSHGIQKIAHEIISEGMPLVDQFQVAVIIDKLPLLWKDFKNTLRHKTKEFSLKILIE
        MTTAK+VWDALQ KYDTEEAGSKKYAVS+YLRYQMTDDKSVEAQSH IQKIAHEIISEGMPL DQFQV VIIDKLP LWKDFKNTLRHKTKEFSL+ LI 
Subjt:  MTTAKQVWDALQMKYDTEEAGSKKYAVSQYLRYQMTDDKSVEAQSHGIQKIAHEIISEGMPLVDQFQVAVIIDKLPLLWKDFKNTLRHKTKEFSLKILIE

Query:  VL
         L
Subjt:  VL

KAA0065758.1 uncharacterized protein E6C27_scaffold37G00490 [Cucumis melo var. makuwa]1.01e-5186.87Show/hide
Query:  MTTAKQVWDALQMKYDTEEAGSKKYAVSQYLRYQMTDDKSVEAQSHGIQKIAHEIISEGMPLVDQFQVAVIIDKLPLLWKDFKNTLRHKTKEFSLKILI
        MTTAK+VWD LQ KYDTE AGSKKYAVS+YLRYQMTDDK VEA SH IQKIAHEIIS+GMPL DQFQVAVIIDKLPLLWKDFKN LRHKTKEFSL+ LI
Subjt:  MTTAKQVWDALQMKYDTEEAGSKKYAVSQYLRYQMTDDKSVEAQSHGIQKIAHEIISEGMPLVDQFQVAVIIDKLPLLWKDFKNTLRHKTKEFSLKILI

TYJ98000.1 hypothetical protein E5676_scaffold487G00230 [Cucumis melo var. makuwa]2.66e-5280.51Show/hide
Query:  MTTAKQVWDALQMKYDTEEAGSKKYAVSQYLRYQMTDDKSVEAQSHGIQKIAHEIISEGMPLVDQFQVAVIIDKLPLLWKDFKNTLRHKTKEFSLKILIE
        MTTAKQVW+ALQ KYDTEEAGSKKYAVS+YLRYQMTDD+SVEAQSH IQKIAHEII+EGMPL DQFQV +IIDKLPLLWKDFKNTLRHKTKEFSL+ LI 
Subjt:  MTTAKQVWDALQMKYDTEEAGSKKYAVSQYLRYQMTDDKSVEAQSHGIQKIAHEIISEGMPLVDQFQVAVIIDKLPLLWKDFKNTLRHKTKEFSLKILIE

Query:  VLTGKSNHETKDRGGSKE
         L  K   E K R   KE
Subjt:  VLTGKSNHETKDRGGSKE

TYK04299.1 uncharacterized protein E5676_scaffold527G00280 [Cucumis melo var. makuwa]4.45e-5285.29Show/hide
Query:  MTTAKQVWDALQMKYDTEEAGSKKYAVSQYLRYQMTDDKSVEAQSHGIQKIAHEIISEGMPLVDQFQVAVIIDKLPLLWKDFKNTLRHKTKEFSLKILIE
        MTTAK+VWD LQ KYDTEEA  KKYA+SQYLRYQMTDDK VEAQSH IQKIAHEIISEGMPL DQFQVAVIIDKLP LWKDFKNTLRHKTKEF L+ LI 
Subjt:  MTTAKQVWDALQMKYDTEEAGSKKYAVSQYLRYQMTDDKSVEAQSHGIQKIAHEIISEGMPLVDQFQVAVIIDKLPLLWKDFKNTLRHKTKEFSLKILIE

Query:  VL
         L
Subjt:  VL

TrEMBL top hitse value%identityAlignment
A0A5A7TUJ4 Uncharacterized protein9.8e-59100Show/hide
Query:  MTTAKQVWDALQMKYDTEEAGSKKYAVSQYLRYQMTDDKSVEAQSHGIQKIAHEIISEGMPLVDQFQVAVIIDKLPLLWKDFKNTLRHKTKEFSLKILIE
        MTTAKQVWDALQMKYDTEEAGSKKYAVSQYLRYQMTDDKSVEAQSHGIQKIAHEIISEGMPLVDQFQVAVIIDKLPLLWKDFKNTLRHKTKEFSLKILIE
Subjt:  MTTAKQVWDALQMKYDTEEAGSKKYAVSQYLRYQMTDDKSVEAQSHGIQKIAHEIISEGMPLVDQFQVAVIIDKLPLLWKDFKNTLRHKTKEFSLKILIE

Query:  VLTGKSNHETKDRGGSKEA
        VLTGKSNHETKDRGGSKEA
Subjt:  VLTGKSNHETKDRGGSKEA

A0A5A7UYY4 Uncharacterized protein1.9e-4190.91Show/hide
Query:  MTTAKQVWDALQMKYDTEEAGSKKYAVSQYLRYQMTDDKSVEAQSHGIQKIAHEIISEGMPLVDQFQVAVIIDKLPLLWKDFKNTLRHKTKEFSLKILI
        MTTAK+VWDALQ KYDTEEAGSKKYAVS+YLRYQMTDDKSVEAQSH IQKIAHEIISEGMPL DQFQV VIIDKLP LWKDFKNTLRHKTKEFSL+ LI
Subjt:  MTTAKQVWDALQMKYDTEEAGSKKYAVSQYLRYQMTDDKSVEAQSHGIQKIAHEIISEGMPLVDQFQVAVIIDKLPLLWKDFKNTLRHKTKEFSLKILI

A0A5D3BDS3 Uncharacterized protein3.7e-4280.51Show/hide
Query:  MTTAKQVWDALQMKYDTEEAGSKKYAVSQYLRYQMTDDKSVEAQSHGIQKIAHEIISEGMPLVDQFQVAVIIDKLPLLWKDFKNTLRHKTKEFSLKILIE
        MTTAKQVW+ALQ KYDTEEAGSKKYAVS+YLRYQMTDD+SVEAQSH IQKIAHEII+EGMPL DQFQV +IIDKLPLLWKDFKNTLRHKTKEFSL+ LI 
Subjt:  MTTAKQVWDALQMKYDTEEAGSKKYAVSQYLRYQMTDDKSVEAQSHGIQKIAHEIISEGMPLVDQFQVAVIIDKLPLLWKDFKNTLRHKTKEFSLKILIE

Query:  VLTGKSNHETKDRGGSKE
         L  K   E K R   KE
Subjt:  VLTGKSNHETKDRGGSKE

A0A5D3BGA0 Retrovirus-related Pol polyprotein from transposon TNT 1-947.8e-4078.63Show/hide
Query:  MTTAKQVWDALQMKYDTEEAGSKKYAVSQYLRYQMTDDKSVEAQSHGIQKIAHEIISEGMPLVDQFQVAVIIDKLPLLWKDFKNTLRHKTKEFSLKILIE
        MTT K+VWDALQ KYDTEEAGSKKYAVS+YLRYQMTDDK  E QSH IQKIAHEIISEGMPL DQFQVAVIIDKLP LWKDFKNTLRHK KEFSLK LI 
Subjt:  MTTAKQVWDALQMKYDTEEAGSKKYAVSQYLRYQMTDDKSVEAQSHGIQKIAHEIISEGMPLVDQFQVAVIIDKLPLLWKDFKNTLRHKTKEFSLKILIE

Query:  VLTGKS---NHETKDRG
         L  +     H+ K RG
Subjt:  VLTGKS---NHETKDRG

A0A5D3DC59 Reverse transcriptase Ty1/copia-type domain-containing protein1.0e-3987.88Show/hide
Query:  MTTAKQVWDALQMKYDTEEAGSKKYAVSQYLRYQMTDDKSVEAQSHGIQKIAHEIISEGMPLVDQFQVAVIIDKLPLLWKDFKNTLRHKTKEFSLKILI
        MTT K+VWDALQ KYDT+EA SKKYAVS+YLRYQMTDDKSVE QSH IQKIAHEIISEGMPL DQFQVAVIIDKLP LWKDFKNTLRHKTKEFSL+ LI
Subjt:  MTTAKQVWDALQMKYDTEEAGSKKYAVSQYLRYQMTDDKSVEAQSHGIQKIAHEIISEGMPLVDQFQVAVIIDKLPLLWKDFKNTLRHKTKEFSLKILI

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
AT4G00980.1 zinc knuckle (CCHC-type) family protein1.4e-0936.71Show/hide
Query:  AKQVWDALQMKYDTEEAGSKKYAVSQYLRYQMTDDKSVEAQSHGIQKIAHEIISEGMPLVDQFQVAVIIDKLPLLWKDF
        AK++WD L+  Y  +E+ SK+  V +Y+ ++M +++ +  Q     KIA  I+S GM L + F V+ II K P  W+ F
Subjt:  AKQVWDALQMKYDTEEAGSKKYAVSQYLRYQMTDDKSVEAQSHGIQKIAHEIISEGMPLVDQFQVAVIIDKLPLLWKDF


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGACTACTGCAAAACAAGTGTGGGATGCGCTGCAAATGAAGTACGATACTGAGGAAGCTGGGTCGAAGAAGTATGCTGTCAGCCAATACCTGAGATATCAAATGACTGA
TGACAAATCCGTGGAAGCACAGTCACATGGAATCCAGAAAATAGCCCACGAGATTATCAGTGAAGGTATGCCACTCGTTGATCAATTTCAAGTTGCTGTTATTATTGATA
AATTACCTCTACTGTGGAAGGATTTCAAGAACACCCTAAGGCACAAAACTAAGGAGTTCTCACTAAAAATTCTAATCGAAGTTCTCACTGGAAAATCTAATCACGAGACT
AAGGATAGAGGAGGAAGCAAGGAAGCATGA
mRNA sequenceShow/hide mRNA sequence
ATGACTACTGCAAAACAAGTGTGGGATGCGCTGCAAATGAAGTACGATACTGAGGAAGCTGGGTCGAAGAAGTATGCTGTCAGCCAATACCTGAGATATCAAATGACTGA
TGACAAATCCGTGGAAGCACAGTCACATGGAATCCAGAAAATAGCCCACGAGATTATCAGTGAAGGTATGCCACTCGTTGATCAATTTCAAGTTGCTGTTATTATTGATA
AATTACCTCTACTGTGGAAGGATTTCAAGAACACCCTAAGGCACAAAACTAAGGAGTTCTCACTAAAAATTCTAATCGAAGTTCTCACTGGAAAATCTAATCACGAGACT
AAGGATAGAGGAGGAAGCAAGGAAGCATGA
Protein sequenceShow/hide protein sequence
MTTAKQVWDALQMKYDTEEAGSKKYAVSQYLRYQMTDDKSVEAQSHGIQKIAHEIISEGMPLVDQFQVAVIIDKLPLLWKDFKNTLRHKTKEFSLKILIEVLTGKSNHET
KDRGGSKEA