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IVF0019419 (gene) of Melon (IVF77) v1 genome

Gene IDIVF0019419
OrganismCucumis melo ssp. agrestis cv. IVF77 (Melon (IVF77) v1)
DescriptionRetrotransposon protein
Genome locationchr08:24199140..24199355
RNA-Seq ExpressionIVF0019419
SyntenyIVF0019419
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0026116.1 retrotransposon protein [Cucumis melo var. makuwa]3.12e-4397.14Show/hide
Query:  MTSSSRLPKHTWTKEEEAGLVGCLVELVNAGGWRSDNGTFRPGYLNQLARMMAFKIPGCNIHASTIDSRI
        MTSSSRLPKHTWTKEEEAGLV CLVELVN GGWRSDNGTFRPGYLNQLARMMAFKIPGCNIHASTIDSRI
Subjt:  MTSSSRLPKHTWTKEEEAGLVGCLVELVNAGGWRSDNGTFRPGYLNQLARMMAFKIPGCNIHASTIDSRI

KAA0054689.1 retrotransposon protein [Cucumis melo var. makuwa]2.85e-4297.14Show/hide
Query:  MTSSSRLPKHTWTKEEEAGLVGCLVELVNAGGWRSDNGTFRPGYLNQLARMMAFKIPGCNIHASTIDSRI
        MTSSSRLPKHTWTKEEEAGLV CLVELVNAGGWRSDNGTFRPGYLNQL RMMAFKIPGCNIHASTIDSRI
Subjt:  MTSSSRLPKHTWTKEEEAGLVGCLVELVNAGGWRSDNGTFRPGYLNQLARMMAFKIPGCNIHASTIDSRI

KAA0063337.1 retrotransposon protein [Cucumis melo var. makuwa]1.80e-4297.14Show/hide
Query:  MTSSSRLPKHTWTKEEEAGLVGCLVELVNAGGWRSDNGTFRPGYLNQLARMMAFKIPGCNIHASTIDSRI
        MTSSSRLPKHTWTKEEEAGLV CLVELVNAGGWRSDNGTFRPGYLNQLARMMAFKIPG NIHASTIDSRI
Subjt:  MTSSSRLPKHTWTKEEEAGLVGCLVELVNAGGWRSDNGTFRPGYLNQLARMMAFKIPGCNIHASTIDSRI

TYJ99726.1 retrotransposon protein [Cucumis melo var. makuwa]7.34e-4498.57Show/hide
Query:  MTSSSRLPKHTWTKEEEAGLVGCLVELVNAGGWRSDNGTFRPGYLNQLARMMAFKIPGCNIHASTIDSRI
        MTSSSRLPKHTWTKEEEAGLV CLVELVNAGGWRSDNGTFRPGYLNQLARMMAFKIPGCNIHASTIDSRI
Subjt:  MTSSSRLPKHTWTKEEEAGLVGCLVELVNAGGWRSDNGTFRPGYLNQLARMMAFKIPGCNIHASTIDSRI

TYK10662.1 retrotransposon protein [Cucumis melo var. makuwa]4.26e-4298.57Show/hide
Query:  MTSSSRLPKHTWTKEEEAGLVGCLVELVNAGGWRSDNGTFRPGYLNQLARMMAFKIPGCNIHASTIDSRI
        MTSSSRLPKHTWTKEEEAGLV CLVELVNAGGWRSDNGTFRPGYLNQLARMMAFKIPGCNIHASTIDSRI
Subjt:  MTSSSRLPKHTWTKEEEAGLVGCLVELVNAGGWRSDNGTFRPGYLNQLARMMAFKIPGCNIHASTIDSRI

TrEMBL top hitse value%identityAlignment
A0A5A7TUJ7 Retrotransposon protein4.2e-3398.57Show/hide
Query:  MTSSSRLPKHTWTKEEEAGLVGCLVELVNAGGWRSDNGTFRPGYLNQLARMMAFKIPGCNIHASTIDSRI
        MTSSSRLPKHTWTKEEEAGLV CLVELVNAGGWRSDNGTFRPGYLNQLARMMAFKIPGCNIHASTIDSRI
Subjt:  MTSSSRLPKHTWTKEEEAGLVGCLVELVNAGGWRSDNGTFRPGYLNQLARMMAFKIPGCNIHASTIDSRI

A0A5A7U216 Retrotransposon protein1.2e-3297.14Show/hide
Query:  MTSSSRLPKHTWTKEEEAGLVGCLVELVNAGGWRSDNGTFRPGYLNQLARMMAFKIPGCNIHASTIDSRI
        MTSSSRLPKHTWTKEEE GLV CLVELVNAGGWRSDNGTFRPGYLNQLARMMAFKIPGCNIHASTIDSRI
Subjt:  MTSSSRLPKHTWTKEEEAGLVGCLVELVNAGGWRSDNGTFRPGYLNQLARMMAFKIPGCNIHASTIDSRI

A0A5A7VC47 Retrotransposon protein5.5e-3398.57Show/hide
Query:  MTSSSRLPKHTWTKEEEAGLVGCLVELVNAGGWRSDNGTFRPGYLNQLARMMAFKIPGCNIHASTIDSRI
        MTSSSRLPKHTWTKEEEAGLV CLVELVNAGGWRSDNGTFRPGYLNQLARMMAFKIPGCNIHASTIDSRI
Subjt:  MTSSSRLPKHTWTKEEEAGLVGCLVELVNAGGWRSDNGTFRPGYLNQLARMMAFKIPGCNIHASTIDSRI

A0A5D3BKP9 Retrotransposon protein4.2e-3398.57Show/hide
Query:  MTSSSRLPKHTWTKEEEAGLVGCLVELVNAGGWRSDNGTFRPGYLNQLARMMAFKIPGCNIHASTIDSRI
        MTSSSRLPKHTWTKEEEAGLV CLVELVNAGGWRSDNGTFRPGYLNQLARMMAFKIPGCNIHASTIDSRI
Subjt:  MTSSSRLPKHTWTKEEEAGLVGCLVELVNAGGWRSDNGTFRPGYLNQLARMMAFKIPGCNIHASTIDSRI

A0A5D3CHB8 Retrotransposon protein4.2e-3398.57Show/hide
Query:  MTSSSRLPKHTWTKEEEAGLVGCLVELVNAGGWRSDNGTFRPGYLNQLARMMAFKIPGCNIHASTIDSRI
        MTSSSRLPKHTWTKEEEAGLV CLVELVNAGGWRSDNGTFRPGYLNQLARMMAFKIPGCNIHASTIDSRI
Subjt:  MTSSSRLPKHTWTKEEEAGLVGCLVELVNAGGWRSDNGTFRPGYLNQLARMMAFKIPGCNIHASTIDSRI

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGACAAGTTCATCGAGACTACCTAAACATACTTGGACTAAAGAGGAAGAGGCAGGCCTCGTGGGGTGCCTCGTGGAGTTGGTCAATGCTGGTGGGTGGAGGTCCGACAA
TGGGACCTTTCGTCCCGGGTACTTAAATCAGCTGGCGAGAATGATGGCCTTCAAGATCCCAGGTTGTAATATCCATGCTTCAACCATTGATAGCCGAATAAATTGA
mRNA sequenceShow/hide mRNA sequence
ATGACAAGTTCATCGAGACTACCTAAACATACTTGGACTAAAGAGGAAGAGGCAGGCCTCGTGGGGTGCCTCGTGGAGTTGGTCAATGCTGGTGGGTGGAGGTCCGACAA
TGGGACCTTTCGTCCCGGGTACTTAAATCAGCTGGCGAGAATGATGGCCTTCAAGATCCCAGGTTGTAATATCCATGCTTCAACCATTGATAGCCGAATAAATTGA
Protein sequenceShow/hide protein sequence
MTSSSRLPKHTWTKEEEAGLVGCLVELVNAGGWRSDNGTFRPGYLNQLARMMAFKIPGCNIHASTIDSRIN