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IVF0019428 (gene) of Melon (IVF77) v1 genome

Gene IDIVF0019428
OrganismCucumis melo ssp. agrestis cv. IVF77 (Melon (IVF77) v1)
DescriptionTransposon Ty3-I Gag-Pol polyprotein
Genome locationchr12:11021921..11022091
RNA-Seq ExpressionIVF0019428
SyntenyIVF0019428
Gene Ontology termsGO:0016020 - membrane (cellular component)
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0026294.1 cytochrome b561 and DOMON domain-containing protein [Cucumis melo var. makuwa]9.25e-0966.67Show/hide
Query:  ASSKNMAIMCKADFEDKLHLGEITSIICFSKGEQVWVFGIER
        ASSK+MA  CK  F D+L+L +ITSIIC  KGEQVWV+G ER
Subjt:  ASSKNMAIMCKADFEDKLHLGEITSIICFSKGEQVWVFGIER
KAA0032002.1 Transposon Ty3-I Gag-Pol polyprotein [Cucumis melo var. makuwa]1.23e-0652Show/hide
Query:  SSKNMAIMCKADFEDKLHLGEITSIICFSKGEQVWVFGIERLSPLKEKLY
        SSK++   C+ +F D LH G+ITSIIC  +  QVW  G ERL  L EK Y
Subjt:  SSKNMAIMCKADFEDKLHLGEITSIICFSKGEQVWVFGIERLSPLKEKLY
KAA0062632.1 uncharacterized protein E6C27_scaffold79G001430 [Cucumis melo var. makuwa]1.24e-0663.16Show/hide
Query:  MAIMCKADFEDKLHLGEITSIICFSKGEQVWVFGIERL
        MA + K +FE+KLHLG+ TSIIC  KG QVW  G+ERL
Subjt:  MAIMCKADFEDKLHLGEITSIICFSKGEQVWVFGIERL
TYJ98051.1 LINE-1 reverse transcriptase isogeny [Cucumis melo var. makuwa]6.53e-0662.16Show/hide
Query:  MAIMCKADFEDKLHLGEITSIICFSKGEQVWVFGIER
        MA + K +FE+KLHLG+ TSIIC  KG QVW  G+ER
Subjt:  MAIMCKADFEDKLHLGEITSIICFSKGEQVWVFGIER
TYK07860.1 uncharacterized protein E5676_scaffold1933G00010 [Cucumis melo var. makuwa]8.79e-1363.46Show/hide
Query:  SSKNMAIMCKADFEDKLHLGEITSIICFSKGEQVWVFGIERLSPLKEKLYKS
        +SK+MA  CK +F+  LH+ EITSI C  KGEQVWV   ERL PLKEK YKS
Subjt:  SSKNMAIMCKADFEDKLHLGEITSIICFSKGEQVWVFGIERLSPLKEKLYKS
TrEMBL top hitse value%identityAlignment
A0A5A7V332 Uncharacterized protein4.2e-0463.16Show/hide
Query:  MAIMCKADFEDKLHLGEITSIICFSKGEQVWVFGIERL
        MA + K +FE+KLHLG+ TSIIC  KG QVW  G+ERL
Subjt:  MAIMCKADFEDKLHLGEITSIICFSKGEQVWVFGIERL
A0A5D3BHD0 LINE-1 reverse transcriptase isogeny9.4e-0462.16Show/hide
Query:  MAIMCKADFEDKLHLGEITSIICFSKGEQVWVFGIER
        MA + K +FE+KLHLG+ TSIIC  KG QVW  G+ER
Subjt:  MAIMCKADFEDKLHLGEITSIICFSKGEQVWVFGIER
A0A5D3C951 Uncharacterized protein3.3e-0963.46Show/hide
Query:  SSKNMAIMCKADFEDKLHLGEITSIICFSKGEQVWVFGIERLSPLKEKLYKS
        +SK+MA  CK +F+  LH+ EITSI C  KGEQVWV   ERL PLKEK YKS
Subjt:  SSKNMAIMCKADFEDKLHLGEITSIICFSKGEQVWVFGIERLSPLKEKLYKS
A0A5D3CY29 Transposon Ty3-I Gag-Pol polyprotein5.5e-0452Show/hide
Query:  SSKNMAIMCKADFEDKLHLGEITSIICFSKGEQVWVFGIERLSPLKEKLY
        SSK++   C+ +F D LH G+ITSIIC  +  QVW  G ERL  L EK Y
Subjt:  SSKNMAIMCKADFEDKLHLGEITSIICFSKGEQVWVFGIERLSPLKEKLY
A0A5D3DDG5 Cytochrome b561 and DOMON domain-containing protein2.7e-0666.67Show/hide
Query:  ASSKNMAIMCKADFEDKLHLGEITSIICFSKGEQVWVFGIER
        ASSK+MA  CK  F D+L+L +ITSIIC  KGEQVWV+G ER
Subjt:  ASSKNMAIMCKADFEDKLHLGEITSIICFSKGEQVWVFGIER
SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGCAAGTAGCAAGAATATGGCTATCATGTGCAAGGCAGATTTTGAAGATAAACTGCACCTTGGCGAGATAACTTCTATCATTTGTTTTTCGAAAGGAGAACAAGTGTG
GGTATTTGGCATTGAGAGGTTGTCACCCTTAAAAGAGAAGCTTTATAAATCTTGTAGGTAA
mRNA sequenceShow/hide mRNA sequence
ATGGCAAGTAGCAAGAATATGGCTATCATGTGCAAGGCAGATTTTGAAGATAAACTGCACCTTGGCGAGATAACTTCTATCATTTGTTTTTCGAAAGGAGAACAAGTGTG
GGTATTTGGCATTGAGAGGTTGTCACCCTTAAAAGAGAAGCTTTATAAATCTTGTAGGTAA
Protein sequenceShow/hide protein sequence
MASSKNMAIMCKADFEDKLHLGEITSIICFSKGEQVWVFGIERLSPLKEKLYKSCR